RNA–Protein interactions for RNA: ENST00000526406.5

GSDMD-206, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 2 BASIC

Gene GSDMD, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-206ENST00000526406 CCNB3Q8WWL7 1395 aa26.5■■□□□ 1.83
GSDMD-206ENST00000526406 ITGAEP38570 1179 aa26.49■■□□□ 1.83
GSDMD-206ENST00000526406 ATP1B4Q9UN42 357 aaPredicted RBP26.45■■□□□ 1.83
GSDMD-206ENST00000526406 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
GSDMD-206ENST00000526406 URB2Q14146 1524 aaKnown RBP26.42■■□□□ 1.82
GSDMD-206ENST00000526406 TDRD9Q8NDG6 1382 aaKnown RBP26.37■■□□□ 1.81
GSDMD-206ENST00000526406 TIAM1Q13009 1591 aa26.37■■□□□ 1.81
GSDMD-206ENST00000526406 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
GSDMD-206ENST00000526406 FHOD3Q2V2M9 1422 aa26.33■■□□□ 1.81
GSDMD-206ENST00000526406 MAP3K1Q13233 1512 aa26.32■■□□□ 1.8
GSDMD-206ENST00000526406 LRRC9Q6ZRR7 1453 aa26.29■■□□□ 1.8
GSDMD-206ENST00000526406 RAB3GAP2Q9H2M9 1393 aa26.27■■□□□ 1.8
GSDMD-206ENST00000526406 PCF11O94913 1555 aaKnown RBP26.25■■□□□ 1.79
GSDMD-206ENST00000526406 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
GSDMD-206ENST00000526406 PDS5BQ9NTI5 1447 aa26.25■■□□□ 1.79
GSDMD-206ENST00000526406 PHLDB1Q86UU1 1377 aa26.24■■□□□ 1.79
GSDMD-206ENST00000526406 FHAD1B1AJZ9 1412 aa26.24■■□□□ 1.79
GSDMD-206ENST00000526406 CUL7Q14999 1698 aa26.2■■□□□ 1.79
GSDMD-206ENST00000526406 WDR97A6NE52 1622 aa26.2■■□□□ 1.78
GSDMD-206ENST00000526406 FAM50AQ14320 339 aaKnown RBP26.19■■□□□ 1.78
GSDMD-206ENST00000526406 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
GSDMD-206ENST00000526406 MAPKBP1O60336 1514 aa26.16■■□□□ 1.78
GSDMD-206ENST00000526406 SETD5Q9C0A6 1442 aa26.15■■□□□ 1.78
GSDMD-206ENST00000526406 CTTNBP2Q8WZ74 1663 aa26.14■■□□□ 1.78
GSDMD-206ENST00000526406 CFAP43Q8NDM7 1665 aa26.13■■□□□ 1.77
GSDMD-206ENST00000526406 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
GSDMD-206ENST00000526406 EFCAB5A4FU69 1503 aa26.07■■□□□ 1.76
GSDMD-206ENST00000526406 FYCO1Q9BQS8 1478 aa26.05■■□□□ 1.76
GSDMD-206ENST00000526406 CASKIN1Q8WXD9 1431 aa26.04■■□□□ 1.76
GSDMD-206ENST00000526406 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.75
GSDMD-206ENST00000526406 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.75
GSDMD-206ENST00000526406 SIN3AQ96ST3 1273 aa26■■□□□ 1.75
GSDMD-206ENST00000526406 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
GSDMD-206ENST00000526406 SNAPC4Q5SXM2 1469 aa25.95■■□□□ 1.75
GSDMD-206ENST00000526406 MTUS2Q5JR59 1369 aa25.91■■□□□ 1.74
GSDMD-206ENST00000526406 SAMD9Q5K651 1589 aa25.9■■□□□ 1.74
GSDMD-206ENST00000526406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.9■■□□□ 1.74
GSDMD-206ENST00000526406 LRRIQ1Q96JM4 1722 aa25.89■■□□□ 1.73
GSDMD-206ENST00000526406 ARID3CA6NKF2 412 aa25.88■■□□□ 1.73
GSDMD-206ENST00000526406 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
GSDMD-206ENST00000526406 PBRM1Q86U86 1689 aa25.86■■□□□ 1.73
GSDMD-206ENST00000526406 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
GSDMD-206ENST00000526406 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
GSDMD-206ENST00000526406 KCNH8Q96L42 1107 aa25.81■■□□□ 1.72
GSDMD-206ENST00000526406 GRIN2BQ13224 1484 aa25.81■■□□□ 1.72
GSDMD-206ENST00000526406 TIMELESSQ9UNS1 1208 aa25.8■■□□□ 1.72
GSDMD-206ENST00000526406 DDX10Q13206 875 aaKnown RBP25.77■■□□□ 1.72
GSDMD-206ENST00000526406 PTPRKQ15262 1439 aa25.76■■□□□ 1.71
GSDMD-206ENST00000526406 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
GSDMD-206ENST00000526406 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
GSDMD-206ENST00000526406 NCOA2Q15596 1464 aa25.75■■□□□ 1.71
GSDMD-206ENST00000526406 SUPT16HQ9Y5B9 1047 aaKnown RBP25.72■■□□□ 1.71
GSDMD-206ENST00000526406 IQGAP2Q13576 1575 aa25.72■■□□□ 1.71
GSDMD-206ENST00000526406 MAGI3Q5TCQ9 1506 aa25.72■■□□□ 1.71
GSDMD-206ENST00000526406 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
GSDMD-206ENST00000526406 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
GSDMD-206ENST00000526406 HFM1A2PYH4 1435 aa25.7■■□□□ 1.7
GSDMD-206ENST00000526406 MYOM3Q5VTT5 1437 aa25.69■■□□□ 1.7
GSDMD-206ENST00000526406 PTPN23Q9H3S7 1636 aa25.65■■□□□ 1.7
GSDMD-206ENST00000526406 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
GSDMD-206ENST00000526406 UACAQ9BZF9 1416 aa25.65■■□□□ 1.7
GSDMD-206ENST00000526406 IFT140Q96RY7 1462 aa25.64■■□□□ 1.7
GSDMD-206ENST00000526406 SUPT6HQ7KZ85 1726 aaKnown RBP25.64■■□□□ 1.7
GSDMD-206ENST00000526406 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.69
GSDMD-206ENST00000526406 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.69
GSDMD-206ENST00000526406 NAIPQ13075 1403 aa25.63■■□□□ 1.69
GSDMD-206ENST00000526406 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
GSDMD-206ENST00000526406 TONSLQ96HA7 1378 aa25.63■■□□□ 1.69
GSDMD-206ENST00000526406 WDR62O43379 1518 aa25.62■■□□□ 1.69
GSDMD-206ENST00000526406 EHBP1L1Q8N3D4 1523 aa25.62■■□□□ 1.69
GSDMD-206ENST00000526406 RRP7BPQ9NSQ0 103 aa25.59■■□□□ 1.69
GSDMD-206ENST00000526406 EPRSP07814 1512 aaKnown RBP25.58■■□□□ 1.69
GSDMD-206ENST00000526406 FBLN2P98095 1184 aa25.58■■□□□ 1.69
GSDMD-206ENST00000526406 UGGT2Q9NYU1 1516 aa25.57■■□□□ 1.68
GSDMD-206ENST00000526406 HECW1Q76N89 1606 aa25.57■■□□□ 1.68
GSDMD-206ENST00000526406 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
GSDMD-206ENST00000526406 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
GSDMD-206ENST00000526406 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
GSDMD-206ENST00000526406 DISP1Q96F81 1524 aa25.48■■□□□ 1.67
GSDMD-206ENST00000526406 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
GSDMD-206ENST00000526406 KIAA0586Q9BVV6 1533 aa25.48■■□□□ 1.67
GSDMD-206ENST00000526406 ANP32CO43423 234 aa25.47■■□□□ 1.67
GSDMD-206ENST00000526406 TCOF1Q13428 1488 aaKnown RBP25.45■■□□□ 1.66
GSDMD-206ENST00000526406 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
GSDMD-206ENST00000526406 CCER2I3L3R5 266 aa25.43■■□□□ 1.66
GSDMD-206ENST00000526406 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
GSDMD-206ENST00000526406 KDM5BQ9UGL1 1544 aa25.42■■□□□ 1.66
GSDMD-206ENST00000526406 MYT1Q01538 1121 aa25.41■■□□□ 1.66
GSDMD-206ENST00000526406 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
GSDMD-206ENST00000526406 NUP153P49790 1475 aaKnown RBP25.38■■□□□ 1.65
GSDMD-206ENST00000526406 DENND4BO75064 1496 aaPredicted RBP25.38■■□□□ 1.65
GSDMD-206ENST00000526406 KDM6BO15054 1643 aa25.38■■□□□ 1.65
GSDMD-206ENST00000526406 GCC2Q8IWJ2 1684 aa25.36■■□□□ 1.65
GSDMD-206ENST00000526406 CEP170Q5SW79 1584 aa25.36■■□□□ 1.65
GSDMD-206ENST00000526406 MIA2Q96PC5 1412 aa25.35■■□□□ 1.65
GSDMD-206ENST00000526406 FOXD1Q16676 465 aa25.34■■□□□ 1.65
GSDMD-206ENST00000526406 AKNAQ7Z591 1439 aa25.33■■□□□ 1.65
GSDMD-206ENST00000526406 PLB1Q6P1J6 1458 aa25.32■■□□□ 1.64
GSDMD-206ENST00000526406 RAPGEF6Q8TEU7 1601 aa25.32■■□□□ 1.64
GSDMD-206ENST00000526406 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms