RNA–Protein interactions for RNA: ENST00000525082.1

DDX6-201, Transcript of DEAD-box helicase 6, humanhuman

TSL 2

Gene DDX6, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX6-201ENST00000525082 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
DDX6-201ENST00000525082 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
DDX6-201ENST00000525082 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
DDX6-201ENST00000525082 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
DDX6-201ENST00000525082 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
DDX6-201ENST00000525082 CARMIL1Q5VZK9 1371 aa16.54■□□□□ 0.24
DDX6-201ENST00000525082 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
DDX6-201ENST00000525082 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
DDX6-201ENST00000525082 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
DDX6-201ENST00000525082 EHMT2Q96KQ7 1210 aa16.47■□□□□ 0.23
DDX6-201ENST00000525082 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
DDX6-201ENST00000525082 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
DDX6-201ENST00000525082 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
DDX6-201ENST00000525082 CHD1O14646 1710 aa16.42■□□□□ 0.22
DDX6-201ENST00000525082 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
DDX6-201ENST00000525082 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
DDX6-201ENST00000525082 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
DDX6-201ENST00000525082 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
DDX6-201ENST00000525082 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
DDX6-201ENST00000525082 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
DDX6-201ENST00000525082 NUP160Q12769 1436 aa16.34■□□□□ 0.21
DDX6-201ENST00000525082 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
DDX6-201ENST00000525082 IQGAP2Q13576 1575 aa16.34■□□□□ 0.21
DDX6-201ENST00000525082 FBLN2P98095 1184 aa16.33■□□□□ 0.2
DDX6-201ENST00000525082 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
DDX6-201ENST00000525082 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
DDX6-201ENST00000525082 CLIP1P30622 1438 aa16.28■□□□□ 0.2
DDX6-201ENST00000525082 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
DDX6-201ENST00000525082 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
DDX6-201ENST00000525082 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
DDX6-201ENST00000525082 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
DDX6-201ENST00000525082 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
DDX6-201ENST00000525082 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
DDX6-201ENST00000525082 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
DDX6-201ENST00000525082 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
DDX6-201ENST00000525082 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
DDX6-201ENST00000525082 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
DDX6-201ENST00000525082 FHOD3Q2V2M9 1422 aa16.12■□□□□ 0.17
DDX6-201ENST00000525082 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
DDX6-201ENST00000525082 VPS8Q8N3P4 1428 aa16.11■□□□□ 0.17
DDX6-201ENST00000525082 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
DDX6-201ENST00000525082 JPH4Q96JJ6 628 aa16.08■□□□□ 0.16
DDX6-201ENST00000525082 PRG4Q92954 1404 aaPredicted RBP16.08■□□□□ 0.16
DDX6-201ENST00000525082 PCF11O94913 1555 aaKnown RBP16.07■□□□□ 0.16
DDX6-201ENST00000525082 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
DDX6-201ENST00000525082 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
DDX6-201ENST00000525082 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
DDX6-201ENST00000525082 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
DDX6-201ENST00000525082 ERCC6L2Q5T890 1561 aa16.02■□□□□ 0.16
DDX6-201ENST00000525082 HECW1Q76N89 1606 aa16■□□□□ 0.15
DDX6-201ENST00000525082 CASKIN1Q8WXD9 1431 aa15.98■□□□□ 0.15
DDX6-201ENST00000525082 RAPGEF6Q8TEU7 1601 aa15.97■□□□□ 0.15
DDX6-201ENST00000525082 CFAP43Q8NDM7 1665 aa15.96■□□□□ 0.15
DDX6-201ENST00000525082 ABCA8O94911 1581 aa15.94■□□□□ 0.14
DDX6-201ENST00000525082 PTPRGP23470 1445 aa15.94■□□□□ 0.14
DDX6-201ENST00000525082 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
DDX6-201ENST00000525082 TTBK1Q5TCY1 1321 aaPredicted RBP15.93■□□□□ 0.14
DDX6-201ENST00000525082 CCDC18Q5T9S5 1454 aa15.92■□□□□ 0.14
DDX6-201ENST00000525082 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
DDX6-201ENST00000525082 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
DDX6-201ENST00000525082 LRRIQ1Q96JM4 1722 aa15.9■□□□□ 0.14
DDX6-201ENST00000525082 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
DDX6-201ENST00000525082 APLP2Q06481 763 aa15.89■□□□□ 0.13
DDX6-201ENST00000525082 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
DDX6-201ENST00000525082 ABCC2Q92887 1545 aa15.89■□□□□ 0.13
DDX6-201ENST00000525082 RIMBP3CA6NJZ7 1639 aa15.88■□□□□ 0.13
DDX6-201ENST00000525082 RIMBP3BA6NNM3 1639 aa15.88■□□□□ 0.13
DDX6-201ENST00000525082 RIMBP3Q9UFD9 1639 aa15.88■□□□□ 0.13
DDX6-201ENST00000525082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.134e-7■□□□□ 9.3
DDX6-201ENST00000525082 DNAJC5Q9H3Z4 198 aa15.88■□□□□ 0.13
DDX6-201ENST00000525082 UACAQ9BZF9 1416 aa15.86■□□□□ 0.13
DDX6-201ENST00000525082 EPRSP07814 1512 aaKnown RBP15.86■□□□□ 0.13
DDX6-201ENST00000525082 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
DDX6-201ENST00000525082 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
DDX6-201ENST00000525082 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
DDX6-201ENST00000525082 EHBP1L1Q8N3D4 1523 aa15.82■□□□□ 0.12
DDX6-201ENST00000525082 ADCY10Q96PN6 1610 aa15.82■□□□□ 0.12
DDX6-201ENST00000525082 LRRC9Q6ZRR7 1453 aa15.79■□□□□ 0.12
DDX6-201ENST00000525082 ZCCHC11Q5TAX3 1644 aaKnown RBP15.78■□□□□ 0.12
DDX6-201ENST00000525082 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
DDX6-201ENST00000525082 MTUS2Q5JR59 1369 aa15.75■□□□□ 0.11
DDX6-201ENST00000525082 KDM5BQ9UGL1 1544 aa15.75■□□□□ 0.11
DDX6-201ENST00000525082 ATP10BO94823 1461 aa15.75■□□□□ 0.11
DDX6-201ENST00000525082 MAGI3Q5TCQ9 1506 aa15.74■□□□□ 0.11
DDX6-201ENST00000525082 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
DDX6-201ENST00000525082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
DDX6-201ENST00000525082 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
DDX6-201ENST00000525082 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
DDX6-201ENST00000525082 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
DDX6-201ENST00000525082 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
DDX6-201ENST00000525082 KIF14Q15058 1648 aa15.71■□□□□ 0.11
DDX6-201ENST00000525082 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
DDX6-201ENST00000525082 KANK4Q5T7N3 995 aaPredicted RBP15.7■□□□□ 0.1
DDX6-201ENST00000525082 NCOA2Q15596 1464 aa15.66■□□□□ 0.1
DDX6-201ENST00000525082 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
DDX6-201ENST00000525082 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
DDX6-201ENST00000525082 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
DDX6-201ENST00000525082 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
DDX6-201ENST00000525082 PLEKHD1A6NEE1 506 aa15.62■□□□□ 0.09
DDX6-201ENST00000525082 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms