RNA–Protein interactions for RNA: ENST00000524826.5

ME3-203, Transcript of malic enzyme 3, humanhuman

TSL 1 (best)

Gene ME3, Length 2,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-203ENST00000524826 CTTNBP2Q8WZ74 1663 aa33.12■■■□□ 2.89
ME3-203ENST00000524826 PPARGC1BQ86YN6 1023 aaKnown RBP33.08■■■□□ 2.89
ME3-203ENST00000524826 SYNJ2O15056 1496 aa33.05■■■□□ 2.88
ME3-203ENST00000524826 GRIN2AQ12879 1464 aa33.03■■■□□ 2.88
ME3-203ENST00000524826 ARHGAP35Q9NRY4 1499 aa33.01■■■□□ 2.87
ME3-203ENST00000524826 ARAP1Q96P48 1450 aa32.97■■■□□ 2.87
ME3-203ENST00000524826 CHMP7Q8WUX9 453 aaPredicted RBP32.95■■■□□ 2.87
ME3-203ENST00000524826 VPS8Q8N3P4 1428 aa32.94■■■□□ 2.86
ME3-203ENST00000524826 EFCAB5A4FU69 1503 aa32.88■■■□□ 2.85
ME3-203ENST00000524826 IQGAP2Q13576 1575 aa32.87■■■□□ 2.85
ME3-203ENST00000524826 FBLN2P98095 1184 aa32.87■■■□□ 2.85
ME3-203ENST00000524826 KIAA0586Q9BVV6 1533 aa32.84■■■□□ 2.85
ME3-203ENST00000524826 CEP170Q5SW79 1584 aa32.82■■■□□ 2.84
ME3-203ENST00000524826 NUP160Q12769 1436 aa32.81■■■□□ 2.84
ME3-203ENST00000524826 SAMD9Q5K651 1589 aa32.79■■■□□ 2.84
ME3-203ENST00000524826 CHD1O14646 1710 aa32.74■■■□□ 2.83
ME3-203ENST00000524826 FHOD3Q2V2M9 1422 aa32.72■■■□□ 2.83
ME3-203ENST00000524826 P3H3Q8IVL6 736 aa32.72■■■□□ 2.83
ME3-203ENST00000524826 UGGT2Q9NYU1 1516 aa32.72■■■□□ 2.83
ME3-203ENST00000524826 ZEB1P37275 1124 aaPredicted RBP32.6■■■□□ 2.81
ME3-203ENST00000524826 FMN1Q68DA7 1419 aa32.57■■■□□ 2.81
ME3-203ENST00000524826 APLP2Q06481 763 aa32.57■■■□□ 2.8
ME3-203ENST00000524826 DISP1Q96F81 1524 aa32.56■■■□□ 2.8
ME3-203ENST00000524826 KIAA0556O60303 1618 aa32.55■■■□□ 2.8
ME3-203ENST00000524826 PCF11O94913 1555 aaKnown RBP32.53■■■□□ 2.8
ME3-203ENST00000524826 JPH4Q96JJ6 628 aa32.51■■■□□ 2.8
ME3-203ENST00000524826 CASKIN1Q8WXD9 1431 aa32.49■■■□□ 2.79
ME3-203ENST00000524826 FYCO1Q9BQS8 1478 aa32.48■■■□□ 2.79
ME3-203ENST00000524826 CARMIL2Q6F5E8 1435 aa32.42■■■□□ 2.78
ME3-203ENST00000524826 MAP3K1Q13233 1512 aa32.41■■■□□ 2.78
ME3-203ENST00000524826 TTBK1Q5TCY1 1321 aaPredicted RBP32.4■■■□□ 2.78
ME3-203ENST00000524826 CLASP1Q7Z460 1538 aa32.39■■■□□ 2.77
ME3-203ENST00000524826 TIAM1Q13009 1591 aa32.38■■■□□ 2.77
ME3-203ENST00000524826 SHROOM2Q13796 1616 aa32.37■■■□□ 2.77
ME3-203ENST00000524826 ATP1B4Q9UN42 357 aaPredicted RBP32.33■■■□□ 2.77
ME3-203ENST00000524826 PRG4Q92954 1404 aaPredicted RBP32.33■■■□□ 2.77
ME3-203ENST00000524826 CFAP43Q8NDM7 1665 aa32.32■■■□□ 2.77
ME3-203ENST00000524826 KANK4Q5T7N3 995 aaPredicted RBP32.32■■■□□ 2.76
ME3-203ENST00000524826 HECW1Q76N89 1606 aa32.26■■■□□ 2.76
ME3-203ENST00000524826 LRRIQ1Q96JM4 1722 aa32.24■■■□□ 2.75
ME3-203ENST00000524826 LRRC9Q6ZRR7 1453 aa32.22■■■□□ 2.75
ME3-203ENST00000524826 RAPGEF6Q8TEU7 1601 aa32.2■■■□□ 2.74
ME3-203ENST00000524826 CCDC18Q5T9S5 1454 aa32.18■■■□□ 2.74
ME3-203ENST00000524826 ERCC6L2Q5T890 1561 aa32.15■■■□□ 2.74
ME3-203ENST00000524826 EPRSP07814 1512 aaKnown RBP32.14■■■□□ 2.74
ME3-203ENST00000524826 OSCARQ8IYS5 282 aa32.14■■■□□ 2.74
ME3-203ENST00000524826 PLB1Q6P1J6 1458 aa32.14■■■□□ 2.74
ME3-203ENST00000524826 NUP153P49790 1475 aaKnown RBP32.12■■■□□ 2.73
ME3-203ENST00000524826 PTPRGP23470 1445 aa32.11■■■□□ 2.73
ME3-203ENST00000524826 ABCA8O94911 1581 aa32.09■■■□□ 2.73
ME3-203ENST00000524826 CDK13Q14004 1512 aaKnown RBP32.06■■■□□ 2.72
ME3-203ENST00000524826 MTUS2Q5JR59 1369 aa32.03■■■□□ 2.72
ME3-203ENST00000524826 EHBP1L1Q8N3D4 1523 aa32■■■□□ 2.71
ME3-203ENST00000524826 ARID3CA6NKF2 412 aa31.99■■■□□ 2.71
ME3-203ENST00000524826 MAGI3Q5TCQ9 1506 aa31.99■■■□□ 2.71
ME3-203ENST00000524826 UACAQ9BZF9 1416 aa31.94■■■□□ 2.7
ME3-203ENST00000524826 RRBP1Q9P2E9 1410 aaKnown RBP31.92■■■□□ 2.7
ME3-203ENST00000524826 PHLDB1Q86UU1 1377 aa31.91■■■□□ 2.7
ME3-203ENST00000524826 SUPT6HQ7KZ85 1726 aaKnown RBP31.89■■■□□ 2.7
ME3-203ENST00000524826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.88■■■□□ 2.69
ME3-203ENST00000524826 HNRNPUL2Q1KMD3 747 aaKnown RBP31.88■■■□□ 2.69
ME3-203ENST00000524826 ATP10BO94823 1461 aa31.86■■■□□ 2.69
ME3-203ENST00000524826 NCOA2Q15596 1464 aa31.86■■■□□ 2.69
ME3-203ENST00000524826 CDK11AQ9UQ88 783 aaPredicted RBP31.86■■■□□ 2.69
ME3-203ENST00000524826 ABCC2Q92887 1545 aa31.86■■■□□ 2.69
ME3-203ENST00000524826 ARHGEF11O15085 1522 aa31.83■■■□□ 2.69
ME3-203ENST00000524826 CCNB3Q8WWL7 1395 aa31.82■■■□□ 2.68
ME3-203ENST00000524826 UHRF1BP1LA0JNW5 1464 aa31.79■■■□□ 2.68
ME3-203ENST00000524826 TROQ12816 1431 aaPredicted RBP31.78■■■□□ 2.68
ME3-203ENST00000524826 MYOM3Q5VTT5 1437 aa31.73■■■□□ 2.67
ME3-203ENST00000524826 FGD6Q6ZV73 1430 aa31.71■■■□□ 2.67
ME3-203ENST00000524826 PLEKHD1A6NEE1 506 aa31.7■■■□□ 2.67
ME3-203ENST00000524826 ADCY10Q96PN6 1610 aa31.69■■■□□ 2.66
ME3-203ENST00000524826 KDM5BQ9UGL1 1544 aa31.66■■■□□ 2.66
ME3-203ENST00000524826 KIF14Q15058 1648 aa31.64■■■□□ 2.65
ME3-203ENST00000524826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.63■■■□□ 2.65
ME3-203ENST00000524826 ZCCHC11Q5TAX3 1644 aaKnown RBP31.63■■■□□ 2.65
ME3-203ENST00000524826 FAM50AQ14320 339 aaKnown RBP31.6■■■□□ 2.65
ME3-203ENST00000524826 CCER1Q8TC90 406 aaPredicted RBP31.57■■■□□ 2.64
ME3-203ENST00000524826 MIA2Q96PC5 1412 aa31.57■■■□□ 2.64
ME3-203ENST00000524826 PTPN23Q9H3S7 1636 aa31.55■■■□□ 2.64
ME3-203ENST00000524826 TCOF1Q13428 1488 aaKnown RBP31.52■■■□□ 2.64
ME3-203ENST00000524826 ABCC10Q5T3U5 1492 aa31.52■■■□□ 2.64
ME3-203ENST00000524826 ITSN2Q9NZM3 1697 aa31.49■■■□□ 2.63
ME3-203ENST00000524826 ITGAEP38570 1179 aa31.49■■■□□ 2.63
ME3-203ENST00000524826 GPATCH8Q9UKJ3 1502 aaKnown RBP31.49■■■□□ 2.63
ME3-203ENST00000524826 RIMBP3CA6NJZ7 1639 aa31.47■■■□□ 2.63
ME3-203ENST00000524826 RIMBP3BA6NNM3 1639 aa31.47■■■□□ 2.63
ME3-203ENST00000524826 RIMBP3Q9UFD9 1639 aa31.47■■■□□ 2.63
ME3-203ENST00000524826 SCAF1Q9H7N4 1312 aaKnown RBP31.44■■■□□ 2.62
ME3-203ENST00000524826 CDC42BPAQ5VT25 1732 aa31.42■■■□□ 2.62
ME3-203ENST00000524826 CFDP1Q9UEE9 299 aaPredicted RBP31.39■■■□□ 2.62
ME3-203ENST00000524826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.38■■■□□ 2.61
ME3-203ENST00000524826 WDR7Q9Y4E6 1490 aa31.37■■■□□ 2.61
ME3-203ENST00000524826 TTC37Q6PGP7 1564 aa31.37■■■□□ 2.61
ME3-203ENST00000524826 KCNH8Q96L42 1107 aa31.34■■■□□ 2.61
ME3-203ENST00000524826 NPM1P06748 294 aaKnown RBP eCLIP31.34■■■□□ 2.61
ME3-203ENST00000524826 PTPRKQ15262 1439 aa31.33■■■□□ 2.61
ME3-203ENST00000524826 CAMSAP2Q08AD1 1489 aa31.32■■■□□ 2.6
ME3-203ENST00000524826 ZNF644Q9H582 1327 aaPredicted RBP31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms