RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
CTNNA1-242ENST00000524292 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
CTNNA1-242ENST00000524292 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
CTNNA1-242ENST00000524292 SYNJ2O15056 1496 aa15.05■□□□□ -0
CTNNA1-242ENST00000524292 SYNJ1O43426 1573 aa15.04■□□□□ -0
CTNNA1-242ENST00000524292 PBRM1Q86U86 1689 aa15.03■□□□□ -0
CTNNA1-242ENST00000524292 SLC4A2P04920 1241 aa15.03■□□□□ -0
CTNNA1-242ENST00000524292 TOP2BQ02880 1626 aa15.02□□□□□ -0.01
CTNNA1-242ENST00000524292 ABCA5Q8WWZ7 1642 aa15.02□□□□□ -0.01
CTNNA1-242ENST00000524292 CYB5RLQ6IPT4 315 aa15.01□□□□□ -0.01
CTNNA1-242ENST00000524292 BIVM-ERCC5R4GMW8 1640 aa15□□□□□ -0.01
CTNNA1-242ENST00000524292 CLASP1Q7Z460 1538 aa15□□□□□ -0.01
CTNNA1-242ENST00000524292 ARAP1Q96P48 1450 aa14.98□□□□□ -0.01
CTNNA1-242ENST00000524292 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
CTNNA1-242ENST00000524292 ADAMTS12P58397 1594 aa14.91□□□□□ -0.02
CTNNA1-242ENST00000524292 GRIN2AQ12879 1464 aa14.91□□□□□ -0.02
CTNNA1-242ENST00000524292 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
CTNNA1-242ENST00000524292 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
CTNNA1-242ENST00000524292 FHAD1B1AJZ9 1412 aa14.89□□□□□ -0.03
CTNNA1-242ENST00000524292 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
CTNNA1-242ENST00000524292 NUP160Q12769 1436 aa14.84□□□□□ -0.03
CTNNA1-242ENST00000524292 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
CTNNA1-242ENST00000524292 CEP170Q5SW79 1584 aa14.83□□□□□ -0.04
CTNNA1-242ENST00000524292 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
CTNNA1-242ENST00000524292 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
CTNNA1-242ENST00000524292 KIF27Q86VH2 1401 aa14.75□□□□□ -0.05
CTNNA1-242ENST00000524292 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
CTNNA1-242ENST00000524292 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
CTNNA1-242ENST00000524292 PRG4Q92954 1404 aaPredicted RBP14.7□□□□□ -0.06
CTNNA1-242ENST00000524292 ZBTB22O15209 634 aa14.7□□□□□ -0.06
CTNNA1-242ENST00000524292 CUL7Q14999 1698 aa14.7□□□□□ -0.06
CTNNA1-242ENST00000524292 RUSC2Q8N2Y8 1516 aa14.7□□□□□ -0.06
CTNNA1-242ENST00000524292 JPH4Q96JJ6 628 aa14.69□□□□□ -0.06
CTNNA1-242ENST00000524292 IGF1RP08069 1367 aa14.69□□□□□ -0.06
CTNNA1-242ENST00000524292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
CTNNA1-242ENST00000524292 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
CTNNA1-242ENST00000524292 KIAA0586Q9BVV6 1533 aa14.64□□□□□ -0.07
CTNNA1-242ENST00000524292 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
CTNNA1-242ENST00000524292 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
CTNNA1-242ENST00000524292 APLP2Q06481 763 aa14.59□□□□□ -0.07
CTNNA1-242ENST00000524292 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
CTNNA1-242ENST00000524292 CARMIL2Q6F5E8 1435 aa14.53□□□□□ -0.08
CTNNA1-242ENST00000524292 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
CTNNA1-242ENST00000524292 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
CTNNA1-242ENST00000524292 IQGAP2Q13576 1575 aa14.52□□□□□ -0.08
CTNNA1-242ENST00000524292 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
CTNNA1-242ENST00000524292 CAPN15O75808 1086 aa14.5□□□□□ -0.09
CTNNA1-242ENST00000524292 ADCY10Q96PN6 1610 aa14.5□□□□□ -0.09
CTNNA1-242ENST00000524292 PTPRGP23470 1445 aa14.49□□□□□ -0.09
CTNNA1-242ENST00000524292 MAPKBP1O60336 1514 aa14.49□□□□□ -0.09
CTNNA1-242ENST00000524292 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
CTNNA1-242ENST00000524292 KIF13AQ9H1H9 1805 aa14.46□□□□□ -0.09
CTNNA1-242ENST00000524292 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
CTNNA1-242ENST00000524292 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
CTNNA1-242ENST00000524292 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
CTNNA1-242ENST00000524292 FAM69CQ0P6D2 419 aa14.44□□□□□ -0.1
CTNNA1-242ENST00000524292 DIP2BQ9P265 1576 aa14.42□□□□□ -0.1
CTNNA1-242ENST00000524292 UGGT2Q9NYU1 1516 aa14.41□□□□□ -0.1
CTNNA1-242ENST00000524292 ABCC2Q92887 1545 aa14.41□□□□□ -0.1
CTNNA1-242ENST00000524292 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
CTNNA1-242ENST00000524292 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
CTNNA1-242ENST00000524292 UHRF1BP1LA0JNW5 1464 aa14.38□□□□□ -0.11
CTNNA1-242ENST00000524292 UACAQ9BZF9 1416 aa14.38□□□□□ -0.11
CTNNA1-242ENST00000524292 KIAA0556O60303 1618 aa14.37□□□□□ -0.11
CTNNA1-242ENST00000524292 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
CTNNA1-242ENST00000524292 PRXQ9BXM0 1461 aa14.36□□□□□ -0.11
CTNNA1-242ENST00000524292 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
CTNNA1-242ENST00000524292 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
CTNNA1-242ENST00000524292 ASXL2Q76L83 1435 aa14.34□□□□□ -0.11
CTNNA1-242ENST00000524292 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
CTNNA1-242ENST00000524292 KDM5BQ9UGL1 1544 aa14.31□□□□□ -0.12
CTNNA1-242ENST00000524292 TSPOAP1O95153 1857 aa14.29□□□□□ -0.12
CTNNA1-242ENST00000524292 DSG3P32926 999 aa14.29□□□□□ -0.12
CTNNA1-242ENST00000524292 KDM6BO15054 1643 aa14.29□□□□□ -0.12
CTNNA1-242ENST00000524292 GLI2P10070 1586 aa14.28□□□□□ -0.12
CTNNA1-242ENST00000524292 EEA1Q15075 1411 aa14.28□□□□□ -0.12
CTNNA1-242ENST00000524292 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
CTNNA1-242ENST00000524292 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
CTNNA1-242ENST00000524292 ZCCHC11Q5TAX3 1644 aaKnown RBP14.27□□□□□ -0.12
CTNNA1-242ENST00000524292 EPRSP07814 1512 aaKnown RBP14.25□□□□□ -0.13
CTNNA1-242ENST00000524292 WDR7Q9Y4E6 1490 aa14.23□□□□□ -0.13
CTNNA1-242ENST00000524292 ABCA8O94911 1581 aa14.22□□□□□ -0.13
CTNNA1-242ENST00000524292 TEX14Q8IWB6 1497 aa14.21□□□□□ -0.13
CTNNA1-242ENST00000524292 ABCB7O75027 752 aa14.2□□□□□ -0.14
CTNNA1-242ENST00000524292 MAP3K4Q9Y6R4 1608 aa14.19□□□□□ -0.14
CTNNA1-242ENST00000524292 PPRC1Q5VV67 1664 aaKnown RBP14.19□□□□□ -0.14
CTNNA1-242ENST00000524292 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
CTNNA1-242ENST00000524292 SAMD9Q5K651 1589 aa14.16□□□□□ -0.14
CTNNA1-242ENST00000524292 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
CTNNA1-242ENST00000524292 KIF21BO75037 1637 aa14.12□□□□□ -0.15
CTNNA1-242ENST00000524292 CFAP43Q8NDM7 1665 aa14.12□□□□□ -0.15
CTNNA1-242ENST00000524292 CD109Q6YHK3 1445 aa14.12□□□□□ -0.15
CTNNA1-242ENST00000524292 ARID3CA6NKF2 412 aa14.11□□□□□ -0.15
CTNNA1-242ENST00000524292 RANGAP1P46060 587 aaPredicted RBP14.11□□□□□ -0.15
CTNNA1-242ENST00000524292 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
CTNNA1-242ENST00000524292 RAPGEF6Q8TEU7 1601 aa14.1□□□□□ -0.15
CTNNA1-242ENST00000524292 ATP10BO94823 1461 aa14.1□□□□□ -0.15
CTNNA1-242ENST00000524292 COL17A1Q9UMD9 1497 aaPredicted RBP14.08□□□□□ -0.16
CTNNA1-242ENST00000524292 POLA2Q14181 598 aa14.08□□□□□ -0.16
CTNNA1-242ENST00000524292 EFCAB5A4FU69 1503 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms