RNA–Protein interactions for RNA: ENST00000524283.5

LINC01608-202, Transcript of long intergenic non-protein coding RNA 1608, humanhuman

TSL 4 BASIC

Gene LINC01608, Length 561 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01608-202ENST00000524283 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.44
LINC01608-202ENST00000524283 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
LINC01608-202ENST00000524283 CUL7Q14999 1698 aa12.26□□□□□ -0.45
LINC01608-202ENST00000524283 AQRO60306 1485 aaKnown RBP eCLIP12.25□□□□□ -0.451e-9■■■■□ 22.4
LINC01608-202ENST00000524283 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
LINC01608-202ENST00000524283 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
LINC01608-202ENST00000524283 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
LINC01608-202ENST00000524283 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.46
LINC01608-202ENST00000524283 EIF4G3O43432 1585 aaKnown RBP12.19□□□□□ -0.46
LINC01608-202ENST00000524283 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
LINC01608-202ENST00000524283 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
LINC01608-202ENST00000524283 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
LINC01608-202ENST00000524283 CEP162Q5TB80 1403 aa12.15□□□□□ -0.46
LINC01608-202ENST00000524283 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
LINC01608-202ENST00000524283 FBLN2P98095 1184 aa12.14□□□□□ -0.47
LINC01608-202ENST00000524283 CLIP1P30622 1438 aa12.13□□□□□ -0.47
LINC01608-202ENST00000524283 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
LINC01608-202ENST00000524283 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
LINC01608-202ENST00000524283 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
LINC01608-202ENST00000524283 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
LINC01608-202ENST00000524283 APLP2Q06481 763 aa12.07□□□□□ -0.48
LINC01608-202ENST00000524283 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
LINC01608-202ENST00000524283 KIAA0586Q9BVV6 1533 aa12.06□□□□□ -0.48
LINC01608-202ENST00000524283 EFCAB5A4FU69 1503 aa12.04□□□□□ -0.48
LINC01608-202ENST00000524283 CTTNBP2Q8WZ74 1663 aa12.02□□□□□ -0.49
LINC01608-202ENST00000524283 IQGAP2Q13576 1575 aa12.01□□□□□ -0.49
LINC01608-202ENST00000524283 NUP160Q12769 1436 aa12.01□□□□□ -0.49
LINC01608-202ENST00000524283 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
LINC01608-202ENST00000524283 VPS8Q8N3P4 1428 aa11.99□□□□□ -0.49
LINC01608-202ENST00000524283 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
LINC01608-202ENST00000524283 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
LINC01608-202ENST00000524283 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
LINC01608-202ENST00000524283 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.5
LINC01608-202ENST00000524283 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
LINC01608-202ENST00000524283 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
LINC01608-202ENST00000524283 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
LINC01608-202ENST00000524283 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
LINC01608-202ENST00000524283 ARAP1Q96P48 1450 aa11.93□□□□□ -0.5
LINC01608-202ENST00000524283 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
LINC01608-202ENST00000524283 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
LINC01608-202ENST00000524283 SAMD9Q5K651 1589 aa11.91□□□□□ -0.5
LINC01608-202ENST00000524283 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
LINC01608-202ENST00000524283 CHD1O14646 1710 aa11.89□□□□□ -0.51
LINC01608-202ENST00000524283 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
LINC01608-202ENST00000524283 CASKIN1Q8WXD9 1431 aa11.87□□□□□ -0.51
LINC01608-202ENST00000524283 PRG4Q92954 1404 aaPredicted RBP11.87□□□□□ -0.51
LINC01608-202ENST00000524283 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
LINC01608-202ENST00000524283 KIAA0556O60303 1618 aa11.86□□□□□ -0.51
LINC01608-202ENST00000524283 DISP1Q96F81 1524 aa11.85□□□□□ -0.51
LINC01608-202ENST00000524283 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
LINC01608-202ENST00000524283 CDK11AQ9UQ88 783 aaPredicted RBP11.84□□□□□ -0.51
LINC01608-202ENST00000524283 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
LINC01608-202ENST00000524283 MAP3K1Q13233 1512 aa11.84□□□□□ -0.51
LINC01608-202ENST00000524283 CLASP1Q7Z460 1538 aa11.83□□□□□ -0.52
LINC01608-202ENST00000524283 PTPRGP23470 1445 aa11.83□□□□□ -0.52
LINC01608-202ENST00000524283 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
LINC01608-202ENST00000524283 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
LINC01608-202ENST00000524283 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
LINC01608-202ENST00000524283 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
LINC01608-202ENST00000524283 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
LINC01608-202ENST00000524283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
LINC01608-202ENST00000524283 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
LINC01608-202ENST00000524283 HECW1Q76N89 1606 aa11.79□□□□□ -0.52
LINC01608-202ENST00000524283 PCF11O94913 1555 aaKnown RBP11.77□□□□□ -0.53
LINC01608-202ENST00000524283 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.53
LINC01608-202ENST00000524283 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
LINC01608-202ENST00000524283 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
LINC01608-202ENST00000524283 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
LINC01608-202ENST00000524283 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
LINC01608-202ENST00000524283 RAPGEF6Q8TEU7 1601 aa11.74□□□□□ -0.53
LINC01608-202ENST00000524283 PLEKHD1A6NEE1 506 aa11.73□□□□□ -0.53
LINC01608-202ENST00000524283 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
LINC01608-202ENST00000524283 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01608-202ENST00000524283 PLB1Q6P1J6 1458 aa11.71□□□□□ -0.53
LINC01608-202ENST00000524283 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
LINC01608-202ENST00000524283 PCGF6Q9BYE7 350 aa11.71□□□□□ -0.53
LINC01608-202ENST00000524283 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
LINC01608-202ENST00000524283 CFAP43Q8NDM7 1665 aa11.69□□□□□ -0.54
LINC01608-202ENST00000524283 ABCA8O94911 1581 aa11.69□□□□□ -0.54
LINC01608-202ENST00000524283 EHBP1L1Q8N3D4 1523 aa11.69□□□□□ -0.54
LINC01608-202ENST00000524283 UHRF1BP1LA0JNW5 1464 aa11.69□□□□□ -0.54
LINC01608-202ENST00000524283 ABCC2Q92887 1545 aa11.67□□□□□ -0.54
LINC01608-202ENST00000524283 ARID3CA6NKF2 412 aa11.67□□□□□ -0.54
LINC01608-202ENST00000524283 ERCC6L2Q5T890 1561 aa11.64□□□□□ -0.55
LINC01608-202ENST00000524283 TROQ12816 1431 aaPredicted RBP11.64□□□□□ -0.55
LINC01608-202ENST00000524283 ATP10BO94823 1461 aa11.63□□□□□ -0.55
LINC01608-202ENST00000524283 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
LINC01608-202ENST00000524283 CDK13Q14004 1512 aaKnown RBP11.63□□□□□ -0.55
LINC01608-202ENST00000524283 SUPT6HQ7KZ85 1726 aaKnown RBP11.62□□□□□ -0.55
LINC01608-202ENST00000524283 CCNB3Q8WWL7 1395 aa11.61□□□□□ -0.55
LINC01608-202ENST00000524283 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
LINC01608-202ENST00000524283 ARHGEF11O15085 1522 aa11.6□□□□□ -0.55
LINC01608-202ENST00000524283 FKBP8Q14318 412 aa11.6□□□□□ -0.55
LINC01608-202ENST00000524283 KDM5BQ9UGL1 1544 aa11.6□□□□□ -0.55
LINC01608-202ENST00000524283 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
LINC01608-202ENST00000524283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01608-202ENST00000524283 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
LINC01608-202ENST00000524283 MIA2Q96PC5 1412 aa11.59□□□□□ -0.55
LINC01608-202ENST00000524283 FAM50AQ14320 339 aaKnown RBP11.58□□□□□ -0.56
LINC01608-202ENST00000524283 PHLDB1Q86UU1 1377 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms