RNA–Protein interactions for RNA: ENST00000524059.5

LINC02209-202, Transcript of long intergenic non-protein coding RNA 2209, humanhuman

TSL 1 (best)

Gene LINC02209, Length 1,870 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02209-202ENST00000524059 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
LINC02209-202ENST00000524059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
LINC02209-202ENST00000524059 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
LINC02209-202ENST00000524059 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
LINC02209-202ENST00000524059 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
LINC02209-202ENST00000524059 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
LINC02209-202ENST00000524059 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
LINC02209-202ENST00000524059 RGL2O15211 777 aa13.65□□□□□ -0.22
LINC02209-202ENST00000524059 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
LINC02209-202ENST00000524059 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
LINC02209-202ENST00000524059 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
LINC02209-202ENST00000524059 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
LINC02209-202ENST00000524059 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
LINC02209-202ENST00000524059 CC2D2AQ9P2K1 1620 aa13.54□□□□□ -0.24
LINC02209-202ENST00000524059 MYT1Q01538 1121 aa13.53□□□□□ -0.24
LINC02209-202ENST00000524059 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
LINC02209-202ENST00000524059 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
LINC02209-202ENST00000524059 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
LINC02209-202ENST00000524059 SOGA1O94964 1423 aa13.42□□□□□ -0.26
LINC02209-202ENST00000524059 CFTRP13569 1480 aa13.41□□□□□ -0.26
LINC02209-202ENST00000524059 SYNJ1O43426 1573 aa13.4□□□□□ -0.26
LINC02209-202ENST00000524059 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
LINC02209-202ENST00000524059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC02209-202ENST00000524059 UBTFP17480 764 aaKnown RBP13.38□□□□□ -0.27
LINC02209-202ENST00000524059 HS6ST3Q8IZP7 471 aa13.38□□□□□ -0.27
LINC02209-202ENST00000524059 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
LINC02209-202ENST00000524059 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
LINC02209-202ENST00000524059 BRPF1P55201 1214 aaPredicted RBP13.36□□□□□ -0.27
LINC02209-202ENST00000524059 EEA1Q15075 1411 aa13.35□□□□□ -0.27
LINC02209-202ENST00000524059 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
LINC02209-202ENST00000524059 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
LINC02209-202ENST00000524059 CUX1P39880 1505 aa13.28□□□□□ -0.28
LINC02209-202ENST00000524059 APLP2Q06481 763 aa13.25□□□□□ -0.29
LINC02209-202ENST00000524059 BIVM-ERCC5R4GMW8 1640 aa13.25□□□□□ -0.29
LINC02209-202ENST00000524059 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
LINC02209-202ENST00000524059 NESP48681 1621 aa13.24□□□□□ -0.29
LINC02209-202ENST00000524059 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
LINC02209-202ENST00000524059 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
LINC02209-202ENST00000524059 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
LINC02209-202ENST00000524059 HRCP23327 699 aa13.22□□□□□ -0.29
LINC02209-202ENST00000524059 PRDM2Q13029 1718 aa13.21□□□□□ -0.29
LINC02209-202ENST00000524059 GOLGA3Q08378 1498 aa13.21□□□□□ -0.3
LINC02209-202ENST00000524059 TNIKQ9UKE5 1360 aa13.2□□□□□ -0.3
LINC02209-202ENST00000524059 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
LINC02209-202ENST00000524059 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC02209-202ENST00000524059 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
LINC02209-202ENST00000524059 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
LINC02209-202ENST00000524059 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
LINC02209-202ENST00000524059 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
LINC02209-202ENST00000524059 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
LINC02209-202ENST00000524059 CEP162Q5TB80 1403 aa13.15□□□□□ -0.3
LINC02209-202ENST00000524059 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
LINC02209-202ENST00000524059 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
LINC02209-202ENST00000524059 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
LINC02209-202ENST00000524059 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
LINC02209-202ENST00000524059 KIF21BO75037 1637 aa13.13□□□□□ -0.31
LINC02209-202ENST00000524059 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
LINC02209-202ENST00000524059 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
LINC02209-202ENST00000524059 CUX2O14529 1486 aa13.11□□□□□ -0.31
LINC02209-202ENST00000524059 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
LINC02209-202ENST00000524059 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.31
LINC02209-202ENST00000524059 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
LINC02209-202ENST00000524059 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
LINC02209-202ENST00000524059 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
LINC02209-202ENST00000524059 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
LINC02209-202ENST00000524059 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
LINC02209-202ENST00000524059 URB2Q14146 1524 aaKnown RBP13.04□□□□□ -0.32
LINC02209-202ENST00000524059 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
LINC02209-202ENST00000524059 IGF1RP08069 1367 aa13.03□□□□□ -0.32
LINC02209-202ENST00000524059 CLIP1P30622 1438 aa13.03□□□□□ -0.32
LINC02209-202ENST00000524059 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
LINC02209-202ENST00000524059 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
LINC02209-202ENST00000524059 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
LINC02209-202ENST00000524059 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
LINC02209-202ENST00000524059 MIER1Q8N108 512 aa13□□□□□ -0.33
LINC02209-202ENST00000524059 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
LINC02209-202ENST00000524059 ZBTB47Q9UFB7 747 aaPredicted RBP12.99□□□□□ -0.33
LINC02209-202ENST00000524059 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
LINC02209-202ENST00000524059 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
LINC02209-202ENST00000524059 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
LINC02209-202ENST00000524059 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
LINC02209-202ENST00000524059 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
LINC02209-202ENST00000524059 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
LINC02209-202ENST00000524059 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
LINC02209-202ENST00000524059 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
LINC02209-202ENST00000524059 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
LINC02209-202ENST00000524059 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
LINC02209-202ENST00000524059 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
LINC02209-202ENST00000524059 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
LINC02209-202ENST00000524059 ARID3AQ99856 593 aa12.89□□□□□ -0.35
LINC02209-202ENST00000524059 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
LINC02209-202ENST00000524059 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
LINC02209-202ENST00000524059 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
LINC02209-202ENST00000524059 GAPVD1Q14C86 1478 aa12.87□□□□□ -0.35
LINC02209-202ENST00000524059 WDR70Q9NW82 654 aa12.87□□□□□ -0.35
LINC02209-202ENST00000524059 STK25O00506 426 aa12.85□□□□□ -0.35
LINC02209-202ENST00000524059 ARAP1Q96P48 1450 aa12.84□□□□□ -0.35
LINC02209-202ENST00000524059 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
LINC02209-202ENST00000524059 POLA2Q14181 598 aa12.84□□□□□ -0.35
LINC02209-202ENST00000524059 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms