RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
LSS-211ENST00000522411 MYT1Q01538 1121 aa20.83■□□□□ 0.93
LSS-211ENST00000522411 CCNB3Q8WWL7 1395 aa20.83■□□□□ 0.92
LSS-211ENST00000522411 ARHGAP35Q9NRY4 1499 aa20.82■□□□□ 0.92
LSS-211ENST00000522411 MRC2Q9UBG0 1479 aa20.8■□□□□ 0.92
LSS-211ENST00000522411 CUX2O14529 1486 aa20.79■□□□□ 0.92
LSS-211ENST00000522411 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
LSS-211ENST00000522411 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
LSS-211ENST00000522411 IGF1RP08069 1367 aa20.72■□□□□ 0.91
LSS-211ENST00000522411 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
LSS-211ENST00000522411 KCNH8Q96L42 1107 aa20.67■□□□□ 0.9
LSS-211ENST00000522411 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
LSS-211ENST00000522411 WDR62O43379 1518 aa20.66■□□□□ 0.9
LSS-211ENST00000522411 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.89
LSS-211ENST00000522411 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
LSS-211ENST00000522411 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
LSS-211ENST00000522411 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.897e-7■■■■■ 40
LSS-211ENST00000522411 TIAM1Q13009 1591 aa20.6■□□□□ 0.89
LSS-211ENST00000522411 ZNF608Q9ULD9 1512 aaPredicted RBP20.6■□□□□ 0.89
LSS-211ENST00000522411 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
LSS-211ENST00000522411 SETD5Q9C0A6 1442 aa20.58■□□□□ 0.89
LSS-211ENST00000522411 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
LSS-211ENST00000522411 FAM50AQ14320 339 aaKnown RBP20.58■□□□□ 0.88
LSS-211ENST00000522411 PHLDB1Q86UU1 1377 aa20.57■□□□□ 0.88
LSS-211ENST00000522411 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
LSS-211ENST00000522411 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
LSS-211ENST00000522411 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
LSS-211ENST00000522411 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
LSS-211ENST00000522411 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
LSS-211ENST00000522411 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
LSS-211ENST00000522411 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
LSS-211ENST00000522411 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
LSS-211ENST00000522411 TSHZ2Q9NRE2 1034 aa20.49■□□□□ 0.87
LSS-211ENST00000522411 HIRIP3Q9BW71 556 aaPredicted RBP20.46■□□□□ 0.87
LSS-211ENST00000522411 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
LSS-211ENST00000522411 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
LSS-211ENST00000522411 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
LSS-211ENST00000522411 CFAP43Q8NDM7 1665 aa20.44■□□□□ 0.86
LSS-211ENST00000522411 BCANQ96GW7 911 aa20.42■□□□□ 0.86
LSS-211ENST00000522411 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
LSS-211ENST00000522411 FBLN2P98095 1184 aa20.4■□□□□ 0.86
LSS-211ENST00000522411 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.85
LSS-211ENST00000522411 EIF4G3O43432 1585 aaKnown RBP20.37■□□□□ 0.85
LSS-211ENST00000522411 FKBP8Q14318 412 aa20.36■□□□□ 0.85
LSS-211ENST00000522411 CUL7Q14999 1698 aa20.36■□□□□ 0.85
LSS-211ENST00000522411 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
LSS-211ENST00000522411 CTTNBP2Q8WZ74 1663 aa20.35■□□□□ 0.85
LSS-211ENST00000522411 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
LSS-211ENST00000522411 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
LSS-211ENST00000522411 EFCAB5A4FU69 1503 aa20.33■□□□□ 0.84
LSS-211ENST00000522411 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
LSS-211ENST00000522411 FYCO1Q9BQS8 1478 aa20.31■□□□□ 0.84
LSS-211ENST00000522411 TRIM52Q96A61 297 aa20.3■□□□□ 0.84
LSS-211ENST00000522411 CASKIN1Q8WXD9 1431 aa20.28■□□□□ 0.84
LSS-211ENST00000522411 ANP32CO43423 234 aa20.27■□□□□ 0.84
LSS-211ENST00000522411 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
LSS-211ENST00000522411 CCER2I3L3R5 266 aa20.25■□□□□ 0.83
LSS-211ENST00000522411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.25■□□□□ 0.835e-8■□□□□ 8.8
LSS-211ENST00000522411 TONSLQ96HA7 1378 aa20.23■□□□□ 0.83
LSS-211ENST00000522411 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
LSS-211ENST00000522411 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
LSS-211ENST00000522411 PTPRKQ15262 1439 aa20.2■□□□□ 0.82
LSS-211ENST00000522411 NEFLP07196 543 aa20.19■□□□□ 0.82
LSS-211ENST00000522411 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
LSS-211ENST00000522411 ANP32EQ9BTT0 268 aa20.19■□□□□ 0.82
LSS-211ENST00000522411 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
LSS-211ENST00000522411 LRRIQ1Q96JM4 1722 aa20.18■□□□□ 0.82
LSS-211ENST00000522411 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
LSS-211ENST00000522411 SAMD9Q5K651 1589 aa20.17■□□□□ 0.82
LSS-211ENST00000522411 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
LSS-211ENST00000522411 HFM1A2PYH4 1435 aa20.13■□□□□ 0.81
LSS-211ENST00000522411 UACAQ9BZF9 1416 aa20.13■□□□□ 0.81
LSS-211ENST00000522411 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
LSS-211ENST00000522411 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
LSS-211ENST00000522411 PTPN23Q9H3S7 1636 aa20.09■□□□□ 0.81
LSS-211ENST00000522411 NAIPQ13075 1403 aa20.09■□□□□ 0.81
LSS-211ENST00000522411 RBM19Q9Y4C8 960 aaKnown RBP20.08■□□□□ 0.8
LSS-211ENST00000522411 NCOA2Q15596 1464 aa20.07■□□□□ 0.8
LSS-211ENST00000522411 MYOM3Q5VTT5 1437 aa20.05■□□□□ 0.8
LSS-211ENST00000522411 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
LSS-211ENST00000522411 CHIC2Q9UKJ5 165 aa20.03■□□□□ 0.8
LSS-211ENST00000522411 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
LSS-211ENST00000522411 HNRNPUQ00839 825 aaKnown RBP eCLIP20.02■□□□□ 0.79
LSS-211ENST00000522411 KDM5BQ9UGL1 1544 aa20.01■□□□□ 0.79
LSS-211ENST00000522411 SUPT6HQ7KZ85 1726 aaKnown RBP20.01■□□□□ 0.79
LSS-211ENST00000522411 CHD1O14646 1710 aa19.99■□□□□ 0.79
LSS-211ENST00000522411 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
LSS-211ENST00000522411 EHBP1L1Q8N3D4 1523 aa19.99■□□□□ 0.79
LSS-211ENST00000522411 MAGI3Q5TCQ9 1506 aa19.98■□□□□ 0.79
LSS-211ENST00000522411 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
LSS-211ENST00000522411 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
LSS-211ENST00000522411 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
LSS-211ENST00000522411 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
LSS-211ENST00000522411 IRX6P78412 446 aaPredicted RBP19.97■□□□□ 0.79
LSS-211ENST00000522411 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
LSS-211ENST00000522411 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
LSS-211ENST00000522411 NUP160Q12769 1436 aa19.94■□□□□ 0.78
LSS-211ENST00000522411 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
LSS-211ENST00000522411 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
LSS-211ENST00000522411 EIF4G2P78344 907 aaKnown RBP eCLIP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 611.7 ms