RNA–Protein interactions for RNA: ENST00000522212.6

TVP23C-CDRT4-203, Transcript of TVP23C-CDRT4 readthrough, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23C-CDRT4, Length 2,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-203ENST00000522212 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 PKNOX2Q96KN3 472 aa18.49■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 CFTRP13569 1480 aa18.46■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 GOLGA3Q08378 1498 aa18.46■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
TVP23C-CDRT4-203ENST00000522212 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
TVP23C-CDRT4-203ENST00000522212 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
TVP23C-CDRT4-203ENST00000522212 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
TVP23C-CDRT4-203ENST00000522212 CUX1P39880 1505 aa18.33■□□□□ 0.52
TVP23C-CDRT4-203ENST00000522212 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
TVP23C-CDRT4-203ENST00000522212 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
TVP23C-CDRT4-203ENST00000522212 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
TVP23C-CDRT4-203ENST00000522212 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
TVP23C-CDRT4-203ENST00000522212 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
TVP23C-CDRT4-203ENST00000522212 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
TVP23C-CDRT4-203ENST00000522212 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
TVP23C-CDRT4-203ENST00000522212 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
TVP23C-CDRT4-203ENST00000522212 HIRIP3Q9BW71 556 aaPredicted RBP18.21■□□□□ 0.51
TVP23C-CDRT4-203ENST00000522212 ZBTB47Q9UFB7 747 aaPredicted RBP18.2■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 HNRNPUQ00839 825 aaKnown RBP eCLIP18.18■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 ANP32CO43423 234 aa18.17■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 PODXL2Q9NZ53 605 aa18.16■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 IPO9Q96P70 1041 aaKnown RBP18.15■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
TVP23C-CDRT4-203ENST00000522212 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
TVP23C-CDRT4-203ENST00000522212 CLIP1P30622 1438 aa18.12■□□□□ 0.49
TVP23C-CDRT4-203ENST00000522212 NEFMP07197 916 aa18.12■□□□□ 0.49
TVP23C-CDRT4-203ENST00000522212 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
TVP23C-CDRT4-203ENST00000522212 VPS8Q8N3P4 1428 aa18.1■□□□□ 0.49
TVP23C-CDRT4-203ENST00000522212 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
TVP23C-CDRT4-203ENST00000522212 WASHC2AQ641Q2 1341 aa18.08■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 PPP1R15AO75807 674 aaPredicted RBP18.07■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 ZMYND15Q9H091 742 aa18.04■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 FANCD2Q9BXW9 1451 aa18.03■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 C11orf95C9JLR9 678 aaPredicted RBP18.03■□□□□ 0.48
TVP23C-CDRT4-203ENST00000522212 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
TVP23C-CDRT4-203ENST00000522212 WASHC2CQ9Y4E1 1318 aa17.98■□□□□ 0.47
TVP23C-CDRT4-203ENST00000522212 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
TVP23C-CDRT4-203ENST00000522212 GLIPR1L2Q4G1C9 344 aa17.98■□□□□ 0.47
TVP23C-CDRT4-203ENST00000522212 RSPH6AQ9H0K4 717 aa17.96■□□□□ 0.47
TVP23C-CDRT4-203ENST00000522212 ARAP1Q96P48 1450 aa17.96■□□□□ 0.47
TVP23C-CDRT4-203ENST00000522212 CUX2O14529 1486 aa17.95■□□□□ 0.46
TVP23C-CDRT4-203ENST00000522212 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
TVP23C-CDRT4-203ENST00000522212 IGF1RP08069 1367 aa17.92■□□□□ 0.46
TVP23C-CDRT4-203ENST00000522212 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
TVP23C-CDRT4-203ENST00000522212 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
TVP23C-CDRT4-203ENST00000522212 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
TVP23C-CDRT4-203ENST00000522212 GSE1Q14687 1217 aa17.88■□□□□ 0.45
TVP23C-CDRT4-203ENST00000522212 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-CDRT4-203ENST00000522212 NESP48681 1621 aa17.85■□□□□ 0.45
TVP23C-CDRT4-203ENST00000522212 CUL7Q14999 1698 aa17.85■□□□□ 0.45
TVP23C-CDRT4-203ENST00000522212 ARHGAP35Q9NRY4 1499 aa17.85■□□□□ 0.45
TVP23C-CDRT4-203ENST00000522212 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.45
TVP23C-CDRT4-203ENST00000522212 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 A0A0U1RQG5 324 aaPredicted RBP17.8■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 MAP3K1Q13233 1512 aa17.8■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 PPM1GO15355 546 aaPredicted RBP17.8■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 DAXXQ9UER7 740 aaPredicted RBP17.79■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 PDS5BQ9NTI5 1447 aa17.78■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 ABCA5Q8WWZ7 1642 aa17.78■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 FAM9BQ8IZU0 186 aa17.78■□□□□ 0.44
TVP23C-CDRT4-203ENST00000522212 KANK4Q5T7N3 995 aaPredicted RBP17.76■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 CCDC184Q52MB2 194 aa17.74■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 CTTNBP2Q8WZ74 1663 aa17.73■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 RAB3GAP2Q9H2M9 1393 aa17.71■□□□□ 0.43
TVP23C-CDRT4-203ENST00000522212 NFKBIBQ15653 356 aa17.71■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 SENP3-EIF4A1A0A087X0R7 540 aa17.67■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 TIAM1Q13009 1591 aa17.67■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 AKNAQ7Z591 1439 aa17.66■□□□□ 0.42
TVP23C-CDRT4-203ENST00000522212 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 RRAGDQ9NQL2 400 aaPredicted RBP17.63■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 PDE4AP27815 886 aa17.62■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 MRS2Q9HD23 443 aa17.59■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 SAMD9Q5K651 1589 aa17.59■□□□□ 0.41
TVP23C-CDRT4-203ENST00000522212 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms