RNA–Protein interactions for RNA: ENST00000522166.1

CHCHD7-213, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 7, humanhuman

TSL 2

Gene CHCHD7, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD7-213ENST00000522166 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
CHCHD7-213ENST00000522166 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
CHCHD7-213ENST00000522166 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
CHCHD7-213ENST00000522166 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
CHCHD7-213ENST00000522166 FAM50AQ14320 339 aaKnown RBP17.23■□□□□ 0.35
CHCHD7-213ENST00000522166 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
CHCHD7-213ENST00000522166 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.2■□□□□ 0.34
CHCHD7-213ENST00000522166 NESP48681 1621 aa17.18■□□□□ 0.34
CHCHD7-213ENST00000522166 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
CHCHD7-213ENST00000522166 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
CHCHD7-213ENST00000522166 CUX2O14529 1486 aa17.16■□□□□ 0.34
CHCHD7-213ENST00000522166 ANP32CO43423 234 aa17.16■□□□□ 0.34
CHCHD7-213ENST00000522166 RRBP1Q9P2E9 1410 aaKnown RBP17.15■□□□□ 0.34
CHCHD7-213ENST00000522166 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
CHCHD7-213ENST00000522166 MAPKBP1O60336 1514 aa17.14■□□□□ 0.33
CHCHD7-213ENST00000522166 CUX1P39880 1505 aa17.13■□□□□ 0.33
CHCHD7-213ENST00000522166 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHCHD7-213ENST00000522166 IL27Q8NEV9 243 aa17.09■□□□□ 0.33
CHCHD7-213ENST00000522166 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.33
CHCHD7-213ENST00000522166 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
CHCHD7-213ENST00000522166 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
CHCHD7-213ENST00000522166 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
CHCHD7-213ENST00000522166 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
CHCHD7-213ENST00000522166 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
CHCHD7-213ENST00000522166 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
CHCHD7-213ENST00000522166 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
CHCHD7-213ENST00000522166 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
CHCHD7-213ENST00000522166 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.32
CHCHD7-213ENST00000522166 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
CHCHD7-213ENST00000522166 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
CHCHD7-213ENST00000522166 FBLN2P98095 1184 aa17■□□□□ 0.31
CHCHD7-213ENST00000522166 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
CHCHD7-213ENST00000522166 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
CHCHD7-213ENST00000522166 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
CHCHD7-213ENST00000522166 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
CHCHD7-213ENST00000522166 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
CHCHD7-213ENST00000522166 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
CHCHD7-213ENST00000522166 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
CHCHD7-213ENST00000522166 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
CHCHD7-213ENST00000522166 IGF1RP08069 1367 aa16.98■□□□□ 0.31
CHCHD7-213ENST00000522166 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
CHCHD7-213ENST00000522166 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
CHCHD7-213ENST00000522166 CFTRP13569 1480 aa16.96■□□□□ 0.31
CHCHD7-213ENST00000522166 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
CHCHD7-213ENST00000522166 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
CHCHD7-213ENST00000522166 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
CHCHD7-213ENST00000522166 FHOD3Q2V2M9 1422 aa16.93■□□□□ 0.3
CHCHD7-213ENST00000522166 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
CHCHD7-213ENST00000522166 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
CHCHD7-213ENST00000522166 FANCD2Q9BXW9 1451 aa16.91■□□□□ 0.3
CHCHD7-213ENST00000522166 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
CHCHD7-213ENST00000522166 ERICH6BQ5W0A0 696 aa16.87■□□□□ 0.29
CHCHD7-213ENST00000522166 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
CHCHD7-213ENST00000522166 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.28
CHCHD7-213ENST00000522166 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
CHCHD7-213ENST00000522166 TIAM1Q13009 1591 aa16.82■□□□□ 0.28
CHCHD7-213ENST00000522166 UBE2Q2Q8WVN8 375 aa16.81■□□□□ 0.28
CHCHD7-213ENST00000522166 RRP7BPQ9NSQ0 103 aa16.81■□□□□ 0.28
CHCHD7-213ENST00000522166 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
CHCHD7-213ENST00000522166 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
CHCHD7-213ENST00000522166 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
CHCHD7-213ENST00000522166 ANP32AP39687 249 aaKnown RBP16.79■□□□□ 0.28
CHCHD7-213ENST00000522166 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
CHCHD7-213ENST00000522166 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
CHCHD7-213ENST00000522166 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
CHCHD7-213ENST00000522166 FOXD1Q16676 465 aa16.76■□□□□ 0.27
CHCHD7-213ENST00000522166 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
CHCHD7-213ENST00000522166 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
CHCHD7-213ENST00000522166 POLR3GLQ9BT43 218 aa16.73■□□□□ 0.27
CHCHD7-213ENST00000522166 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
CHCHD7-213ENST00000522166 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
CHCHD7-213ENST00000522166 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
CHCHD7-213ENST00000522166 AQRO60306 1485 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHCHD7-213ENST00000522166 ZNF777Q9ULD5 760 aaPredicted RBP16.71■□□□□ 0.27
CHCHD7-213ENST00000522166 NEFMP07197 916 aa16.7■□□□□ 0.26
CHCHD7-213ENST00000522166 MTUS2Q5JR59 1369 aa16.69■□□□□ 0.26
CHCHD7-213ENST00000522166 CCDC18Q5T9S5 1454 aa16.68■□□□□ 0.26
CHCHD7-213ENST00000522166 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
CHCHD7-213ENST00000522166 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
CHCHD7-213ENST00000522166 PCF11O94913 1555 aaKnown RBP16.68■□□□□ 0.26
CHCHD7-213ENST00000522166 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
CHCHD7-213ENST00000522166 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
CHCHD7-213ENST00000522166 EIF4G2P78344 907 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHCHD7-213ENST00000522166 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
CHCHD7-213ENST00000522166 AKNAQ7Z591 1439 aa16.63■□□□□ 0.25
CHCHD7-213ENST00000522166 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
CHCHD7-213ENST00000522166 ZNF326Q5BKZ1 582 aaKnown RBP16.62■□□□□ 0.25
CHCHD7-213ENST00000522166 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
CHCHD7-213ENST00000522166 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
CHCHD7-213ENST00000522166 L3MBTL2Q969R5 705 aa16.58■□□□□ 0.24
CHCHD7-213ENST00000522166 ZNF644Q9H582 1327 aaPredicted RBP16.58■□□□□ 0.24
CHCHD7-213ENST00000522166 UACAQ9BZF9 1416 aa16.57■□□□□ 0.24
CHCHD7-213ENST00000522166 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
CHCHD7-213ENST00000522166 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
CHCHD7-213ENST00000522166 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
CHCHD7-213ENST00000522166 NAIPQ13075 1403 aa16.54■□□□□ 0.24
CHCHD7-213ENST00000522166 CNTLNQ9NXG0 1405 aa16.54■□□□□ 0.24
CHCHD7-213ENST00000522166 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
CHCHD7-213ENST00000522166 KDM5BQ9UGL1 1544 aa16.53■□□□□ 0.24
CHCHD7-213ENST00000522166 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms