RNA–Protein interactions for RNA: ENST00000522146.1

MTCL1-212, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-212ENST00000522146 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
MTCL1-212ENST00000522146 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
MTCL1-212ENST00000522146 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
MTCL1-212ENST00000522146 C19orf67A6NJJ6 358 aa12.05□□□□□ -0.48
MTCL1-212ENST00000522146 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
MTCL1-212ENST00000522146 CHADLQ6NUI6 762 aa12.05□□□□□ -0.48
MTCL1-212ENST00000522146 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
MTCL1-212ENST00000522146 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
MTCL1-212ENST00000522146 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
MTCL1-212ENST00000522146 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
MTCL1-212ENST00000522146 MRC2Q9UBG0 1479 aa11.98□□□□□ -0.49
MTCL1-212ENST00000522146 WDR62O43379 1518 aa11.95□□□□□ -0.5
MTCL1-212ENST00000522146 GABBR2O75899 941 aa11.89□□□□□ -0.51
MTCL1-212ENST00000522146 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
MTCL1-212ENST00000522146 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
MTCL1-212ENST00000522146 FANCD2Q9BXW9 1451 aa11.85□□□□□ -0.51
MTCL1-212ENST00000522146 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
MTCL1-212ENST00000522146 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
MTCL1-212ENST00000522146 CFTRP13569 1480 aa11.81□□□□□ -0.52
MTCL1-212ENST00000522146 WIZO95785 1651 aa11.81□□□□□ -0.52
MTCL1-212ENST00000522146 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
MTCL1-212ENST00000522146 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.52
MTCL1-212ENST00000522146 RIMBP3CA6NJZ7 1639 aa11.77□□□□□ -0.53
MTCL1-212ENST00000522146 RIMBP3BA6NNM3 1639 aa11.77□□□□□ -0.53
MTCL1-212ENST00000522146 RIMBP3Q9UFD9 1639 aa11.77□□□□□ -0.53
MTCL1-212ENST00000522146 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
MTCL1-212ENST00000522146 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
MTCL1-212ENST00000522146 ARHGEF11O15085 1522 aa11.71□□□□□ -0.53
MTCL1-212ENST00000522146 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
MTCL1-212ENST00000522146 CLCN6P51797 869 aa11.67□□□□□ -0.54
MTCL1-212ENST00000522146 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
MTCL1-212ENST00000522146 IFT140Q96RY7 1462 aa11.66□□□□□ -0.54
MTCL1-212ENST00000522146 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
MTCL1-212ENST00000522146 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
MTCL1-212ENST00000522146 LHX8Q68G74 356 aa11.63□□□□□ -0.55
MTCL1-212ENST00000522146 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
MTCL1-212ENST00000522146 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
MTCL1-212ENST00000522146 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
MTCL1-212ENST00000522146 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
MTCL1-212ENST00000522146 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.562e-8■■■■□ 19.7
MTCL1-212ENST00000522146 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
MTCL1-212ENST00000522146 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
MTCL1-212ENST00000522146 MNX1P50219 401 aaPredicted RBP11.54□□□□□ -0.56
MTCL1-212ENST00000522146 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
MTCL1-212ENST00000522146 PRDM2Q13029 1718 aa11.53□□□□□ -0.56
MTCL1-212ENST00000522146 PROM2Q8N271 834 aa11.53□□□□□ -0.56
MTCL1-212ENST00000522146 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
MTCL1-212ENST00000522146 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.57
MTCL1-212ENST00000522146 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
MTCL1-212ENST00000522146 CHD1O14646 1710 aa11.5□□□□□ -0.57
MTCL1-212ENST00000522146 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
MTCL1-212ENST00000522146 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
MTCL1-212ENST00000522146 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
MTCL1-212ENST00000522146 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
MTCL1-212ENST00000522146 PHF12Q96QT6 1004 aa11.47□□□□□ -0.57
MTCL1-212ENST00000522146 CHMP7Q8WUX9 453 aaPredicted RBP11.46□□□□□ -0.57
MTCL1-212ENST00000522146 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
MTCL1-212ENST00000522146 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
MTCL1-212ENST00000522146 SOGA1O94964 1423 aa11.44□□□□□ -0.58
MTCL1-212ENST00000522146 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.59
MTCL1-212ENST00000522146 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
MTCL1-212ENST00000522146 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
MTCL1-212ENST00000522146 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
MTCL1-212ENST00000522146 GRIN2BQ13224 1484 aa11.34□□□□□ -0.59
MTCL1-212ENST00000522146 GAPVD1Q14C86 1478 aa11.33□□□□□ -0.6
MTCL1-212ENST00000522146 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
MTCL1-212ENST00000522146 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
MTCL1-212ENST00000522146 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
MTCL1-212ENST00000522146 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
MTCL1-212ENST00000522146 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
MTCL1-212ENST00000522146 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
MTCL1-212ENST00000522146 CUX1P39880 1505 aa11.27□□□□□ -0.61
MTCL1-212ENST00000522146 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
MTCL1-212ENST00000522146 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
MTCL1-212ENST00000522146 ASTLQ6HA08 431 aaPredicted RBP11.26□□□□□ -0.61
MTCL1-212ENST00000522146 MIER1Q8N108 512 aa11.26□□□□□ -0.61
MTCL1-212ENST00000522146 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
MTCL1-212ENST00000522146 ATMINO43313 823 aaPredicted RBP11.23□□□□□ -0.61
MTCL1-212ENST00000522146 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
MTCL1-212ENST00000522146 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
MTCL1-212ENST00000522146 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
MTCL1-212ENST00000522146 ABCA10Q8WWZ4 1543 aa11.19□□□□□ -0.62
MTCL1-212ENST00000522146 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
MTCL1-212ENST00000522146 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
MTCL1-212ENST00000522146 NUP160Q12769 1436 aa11.18□□□□□ -0.62
MTCL1-212ENST00000522146 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
MTCL1-212ENST00000522146 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
MTCL1-212ENST00000522146 C7P10643 843 aa11.17□□□□□ -0.62
MTCL1-212ENST00000522146 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
MTCL1-212ENST00000522146 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
MTCL1-212ENST00000522146 GRIN2AQ12879 1464 aa11.17□□□□□ -0.62
MTCL1-212ENST00000522146 CEP170Q5SW79 1584 aa11.16□□□□□ -0.62
MTCL1-212ENST00000522146 FAM69CQ0P6D2 419 aa11.16□□□□□ -0.62
MTCL1-212ENST00000522146 JPH4Q96JJ6 628 aa11.16□□□□□ -0.62
MTCL1-212ENST00000522146 ABCA5Q8WWZ7 1642 aa11.14□□□□□ -0.63
MTCL1-212ENST00000522146 MAP3K13O43283 966 aa11.14□□□□□ -0.63
MTCL1-212ENST00000522146 ATN1P54259 1190 aaPredicted RBP11.14□□□□□ -0.63
MTCL1-212ENST00000522146 ILDR1Q86SU0 546 aaPredicted RBP11.14□□□□□ -0.63
MTCL1-212ENST00000522146 KIF13AQ9H1H9 1805 aa11.14□□□□□ -0.63
MTCL1-212ENST00000522146 FKBP8Q14318 412 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms