RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 CADPSQ9ULU8 1353 aa7.34□□□□□ -1.23
PVT1-211ENST00000521600 ARAP1Q96P48 1450 aa7.34□□□□□ -1.23
PVT1-211ENST00000521600 CEP164Q9UPV0 1460 aa7.34□□□□□ -1.23
PVT1-211ENST00000521600 SPDYE2BA6NHP3 402 aa7.32□□□□□ -1.24
PVT1-211ENST00000521600 SPDYE6P0CI01 402 aa7.32□□□□□ -1.24
PVT1-211ENST00000521600 SPDYE2Q495Y8 402 aa7.32□□□□□ -1.24
PVT1-211ENST00000521600 CHD1O14646 1710 aa7.31□□□□□ -1.24
PVT1-211ENST00000521600 CYB5RLQ6IPT4 315 aa7.31□□□□□ -1.24
PVT1-211ENST00000521600 MROH2BQ7Z745 1585 aa7.31□□□□□ -1.24
PVT1-211ENST00000521600 URB2Q14146 1524 aaKnown RBP7.31□□□□□ -1.24
PVT1-211ENST00000521600 IFNLR1Q8IU57 520 aaPredicted RBP7.3□□□□□ -1.24
PVT1-211ENST00000521600 FANCD2Q9BXW9 1451 aa7.3□□□□□ -1.24
PVT1-211ENST00000521600 SSUH2Q9Y2M2 353 aa7.29□□□□□ -1.24
PVT1-211ENST00000521600 ZNF608Q9ULD9 1512 aaPredicted RBP7.28□□□□□ -1.24
PVT1-211ENST00000521600 SLC24A1O60721 1099 aa7.28□□□□□ -1.24
PVT1-211ENST00000521600 EIF4G3O43432 1585 aaKnown RBP7.25□□□□□ -1.25
PVT1-211ENST00000521600 PRDM2Q13029 1718 aa7.24□□□□□ -1.25
PVT1-211ENST00000521600 WIZO95785 1651 aa7.24□□□□□ -1.25
PVT1-211ENST00000521600 ILDR1Q86SU0 546 aaPredicted RBP7.22□□□□□ -1.25
PVT1-211ENST00000521600 STAG3Q9UJ98 1225 aa7.22□□□□□ -1.25
PVT1-211ENST00000521600 KLHL34Q8N239 644 aa7.21□□□□□ -1.26
PVT1-211ENST00000521600 CFTRP13569 1480 aa7.21□□□□□ -1.26
PVT1-211ENST00000521600 RSF1Q96T23 1441 aaPredicted RBP7.19□□□□□ -1.26
PVT1-211ENST00000521600 PLCD3Q8N3E9 789 aa7.19□□□□□ -1.26
PVT1-211ENST00000521600 IFT140Q96RY7 1462 aa7.18□□□□□ -1.26
PVT1-211ENST00000521600 MIER1Q8N108 512 aa7.17□□□□□ -1.26
PVT1-211ENST00000521600 CLASP1Q7Z460 1538 aa7.17□□□□□ -1.26
PVT1-211ENST00000521600 PKD2Q13563 968 aa7.15□□□□□ -1.26
PVT1-211ENST00000521600 SPOCK2Q92563 424 aa7.15□□□□□ -1.26
PVT1-211ENST00000521600 TARBP1Q13395 1621 aaKnown RBP7.15□□□□□ -1.27
PVT1-211ENST00000521600 KIF13AQ9H1H9 1805 aa7.14□□□□□ -1.27
PVT1-211ENST00000521600 TOPBP1Q92547 1522 aa7.13□□□□□ -1.27
PVT1-211ENST00000521600 AQRO60306 1485 aaKnown RBP eCLIP7.13□□□□□ -1.271e-7■■■■■ 30.7
PVT1-211ENST00000521600 RBM42Q9BTD8 480 aaKnown RBP7.1□□□□□ -1.27
PVT1-211ENST00000521600 PLEKHG5O94827 1062 aa7.09□□□□□ -1.27
PVT1-211ENST00000521600 DNMBPQ6XZF7 1577 aa7.08□□□□□ -1.28
PVT1-211ENST00000521600 ECM2O94769 699 aaPredicted RBP7.08□□□□□ -1.28
PVT1-211ENST00000521600 AKT1S1Q96B36 256 aa7.07□□□□□ -1.28
PVT1-211ENST00000521600 SYNJ1O43426 1573 aa7.07□□□□□ -1.28
PVT1-211ENST00000521600 TOP2AP11388 1531 aaKnown RBP7.06□□□□□ -1.28
PVT1-211ENST00000521600 GAPVD1Q14C86 1478 aa7.06□□□□□ -1.28
PVT1-211ENST00000521600 ERCC6L2Q5T890 1561 aa7.06□□□□□ -1.28
PVT1-211ENST00000521600 SNAPC4Q5SXM2 1469 aa7.05□□□□□ -1.28
PVT1-211ENST00000521600 KDM4FA0A1W2PPD8 638 aa7.05□□□□□ -1.28
PVT1-211ENST00000521600 SPDYE1Q8NFV5 336 aaPredicted RBP7.05□□□□□ -1.28
PVT1-211ENST00000521600 ZBTB47Q9UFB7 747 aaPredicted RBP7.05□□□□□ -1.28
PVT1-211ENST00000521600 CLEC11AQ9Y240 323 aa7.05□□□□□ -1.28
PVT1-211ENST00000521600 POLA1P09884 1462 aaPredicted RBP7.04□□□□□ -1.28
PVT1-211ENST00000521600 CIZ1Q9ULV3 898 aaPredicted RBP7.03□□□□□ -1.28
PVT1-211ENST00000521600 PLCB2Q00722 1185 aa7.02□□□□□ -1.29
PVT1-211ENST00000521600 RAD54L2Q9Y4B4 1467 aa7.02□□□□□ -1.29
PVT1-211ENST00000521600 PBRM1Q86U86 1689 aa7.01□□□□□ -1.29
PVT1-211ENST00000521600 ABCC8Q09428 1581 aa7.01□□□□□ -1.29
PVT1-211ENST00000521600 REM2Q8IYK8 340 aaPredicted RBP7.01□□□□□ -1.29
PVT1-211ENST00000521600 TDRD9Q8NDG6 1382 aaKnown RBP7□□□□□ -1.29
PVT1-211ENST00000521600 RGL2O15211 777 aa7□□□□□ -1.29
PVT1-211ENST00000521600 PRR29P0C7W0 189 aa7□□□□□ -1.29
PVT1-211ENST00000521600 WDR97A6NE52 1622 aa6.99□□□□□ -1.29
PVT1-211ENST00000521600 MAGI1Q96QZ7 1491 aaPredicted RBP6.98□□□□□ -1.29
PVT1-211ENST00000521600 TSPOAP1O95153 1857 aa6.98□□□□□ -1.29
PVT1-211ENST00000521600 CCDC88BA6NC98 1476 aa6.98□□□□□ -1.29
PVT1-211ENST00000521600 SYNJ2O15056 1496 aa6.98□□□□□ -1.29
PVT1-211ENST00000521600 HECW2Q9P2P5 1572 aa6.97□□□□□ -1.29
PVT1-211ENST00000521600 KDM6BO15054 1643 aa6.97□□□□□ -1.29
PVT1-211ENST00000521600 HAP1P54257 671 aaPredicted RBP6.96□□□□□ -1.3
PVT1-211ENST00000521600 CREBZFQ9NS37 354 aa6.96□□□□□ -1.3
PVT1-211ENST00000521600 CEP170Q5SW79 1584 aa6.95□□□□□ -1.3
PVT1-211ENST00000521600 CHMP7Q8WUX9 453 aaPredicted RBP6.95□□□□□ -1.3
PVT1-211ENST00000521600 DIP2BQ9P265 1576 aa6.95□□□□□ -1.3
PVT1-211ENST00000521600 SHROOM2Q13796 1616 aa6.94□□□□□ -1.3
PVT1-211ENST00000521600 SOGA1O94964 1423 aa6.94□□□□□ -1.3
PVT1-211ENST00000521600 GRIN2BQ13224 1484 aa6.94□□□□□ -1.3
PVT1-211ENST00000521600 PITPNM1O00562 1244 aa6.94□□□□□ -1.3
PVT1-211ENST00000521600 NPM1P06748 294 aaKnown RBP eCLIP6.94□□□□□ -1.3
PVT1-211ENST00000521600 NUBP1P53384 320 aa6.94□□□□□ -1.3
PVT1-211ENST00000521600 FGD5Q6ZNL6 1462 aa6.93□□□□□ -1.3
PVT1-211ENST00000521600 GSE1Q14687 1217 aa6.93□□□□□ -1.3
PVT1-211ENST00000521600 DCAF8Q5TAQ9 597 aa6.93□□□□□ -1.3
PVT1-211ENST00000521600 BBXQ8WY36 941 aaPredicted RBP6.92□□□□□ -1.3
PVT1-211ENST00000521600 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.92□□□□□ -1.3
PVT1-211ENST00000521600 ABCC10Q5T3U5 1492 aa6.92□□□□□ -1.3
PVT1-211ENST00000521600 MNX1P50219 401 aaPredicted RBP6.91□□□□□ -1.3
PVT1-211ENST00000521600 ADGRL1O94910 1474 aa6.91□□□□□ -1.3
PVT1-211ENST00000521600 ABCA5Q8WWZ7 1642 aa6.9□□□□□ -1.3
PVT1-211ENST00000521600 PAXIP1Q6ZW49 1069 aaPredicted RBP6.89□□□□□ -1.31
PVT1-211ENST00000521600 CFAP44Q96MT7 982 aa6.89□□□□□ -1.31
PVT1-211ENST00000521600 CUX1P39880 1505 aa6.89□□□□□ -1.31
PVT1-211ENST00000521600 PPRC1Q5VV67 1664 aaKnown RBP6.89□□□□□ -1.31
PVT1-211ENST00000521600 MAPKBP1O60336 1514 aa6.88□□□□□ -1.31
PVT1-211ENST00000521600 CHGAP10645 457 aaKnown RBP6.88□□□□□ -1.31
PVT1-211ENST00000521600 FAM69CQ0P6D2 419 aa6.88□□□□□ -1.31
PVT1-211ENST00000521600 FAM212AQ96EL1 285 aa6.88□□□□□ -1.31
PVT1-211ENST00000521600 ADCY10Q96PN6 1610 aa6.87□□□□□ -1.31
PVT1-211ENST00000521600 ADAMTS12P58397 1594 aa6.87□□□□□ -1.31
PVT1-211ENST00000521600 GRIN2AQ12879 1464 aa6.87□□□□□ -1.31
PVT1-211ENST00000521600 NUP160Q12769 1436 aa6.87□□□□□ -1.31
PVT1-211ENST00000521600 RASEFQ8IZ41 740 aa6.87□□□□□ -1.31
PVT1-211ENST00000521600 RNF25Q96BH1 459 aaPredicted RBP6.87□□□□□ -1.31
PVT1-211ENST00000521600 CHADLQ6NUI6 762 aa6.85□□□□□ -1.31
PVT1-211ENST00000521600 FBXO41Q8TF61 875 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms