RNA–Protein interactions for RNA: ENST00000521147.1

CASC9-202, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 731 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-202ENST00000521147 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
CASC9-202ENST00000521147 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
CASC9-202ENST00000521147 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
CASC9-202ENST00000521147 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
CASC9-202ENST00000521147 CUX1P39880 1505 aa13.85□□□□□ -0.19
CASC9-202ENST00000521147 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
CASC9-202ENST00000521147 KIF13AQ9H1H9 1805 aa13.81□□□□□ -0.2
CASC9-202ENST00000521147 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
CASC9-202ENST00000521147 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
CASC9-202ENST00000521147 GRIN2AQ12879 1464 aa13.71□□□□□ -0.21
CASC9-202ENST00000521147 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
CASC9-202ENST00000521147 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
CASC9-202ENST00000521147 ADAMTS12P58397 1594 aa13.68□□□□□ -0.22
CASC9-202ENST00000521147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.22
CASC9-202ENST00000521147 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
CASC9-202ENST00000521147 NUP160Q12769 1436 aa13.66□□□□□ -0.22
CASC9-202ENST00000521147 KDM4FA0A1W2PPD8 638 aa13.65□□□□□ -0.22
CASC9-202ENST00000521147 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
CASC9-202ENST00000521147 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
CASC9-202ENST00000521147 PRG4Q92954 1404 aaPredicted RBP13.59□□□□□ -0.23
CASC9-202ENST00000521147 ABCC10Q5T3U5 1492 aa13.59□□□□□ -0.23
CASC9-202ENST00000521147 DIP2BQ9P265 1576 aa13.58□□□□□ -0.23
CASC9-202ENST00000521147 KDM6BO15054 1643 aa13.58□□□□□ -0.24
CASC9-202ENST00000521147 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
CASC9-202ENST00000521147 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
CASC9-202ENST00000521147 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
CASC9-202ENST00000521147 MAPKBP1O60336 1514 aa13.52□□□□□ -0.25
CASC9-202ENST00000521147 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
CASC9-202ENST00000521147 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
CASC9-202ENST00000521147 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
CASC9-202ENST00000521147 BIVM-ERCC5R4GMW8 1640 aa13.48□□□□□ -0.25
CASC9-202ENST00000521147 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
CASC9-202ENST00000521147 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
CASC9-202ENST00000521147 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
CASC9-202ENST00000521147 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
CASC9-202ENST00000521147 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
CASC9-202ENST00000521147 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
CASC9-202ENST00000521147 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
CASC9-202ENST00000521147 COL17A1Q9UMD9 1497 aaPredicted RBP13.35□□□□□ -0.27
CASC9-202ENST00000521147 CUL7Q14999 1698 aa13.33□□□□□ -0.28
CASC9-202ENST00000521147 KIAA0586Q9BVV6 1533 aa13.31□□□□□ -0.28
CASC9-202ENST00000521147 SUPT5HO00267 1087 aaKnown RBP13.31□□□□□ -0.28
CASC9-202ENST00000521147 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
CASC9-202ENST00000521147 PTPRGP23470 1445 aa13.29□□□□□ -0.28
CASC9-202ENST00000521147 ABCC2Q92887 1545 aa13.29□□□□□ -0.28
CASC9-202ENST00000521147 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
CASC9-202ENST00000521147 GLI2P10070 1586 aa13.28□□□□□ -0.28
CASC9-202ENST00000521147 MAP3K4Q9Y6R4 1608 aa13.25□□□□□ -0.29
CASC9-202ENST00000521147 CAPN15O75808 1086 aa13.24□□□□□ -0.29
CASC9-202ENST00000521147 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
CASC9-202ENST00000521147 IGF1RP08069 1367 aa13.22□□□□□ -0.29
CASC9-202ENST00000521147 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
CASC9-202ENST00000521147 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
CASC9-202ENST00000521147 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
CASC9-202ENST00000521147 ZCCHC11Q5TAX3 1644 aaKnown RBP13.19□□□□□ -0.3
CASC9-202ENST00000521147 KIF21BO75037 1637 aa13.17□□□□□ -0.3
CASC9-202ENST00000521147 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
CASC9-202ENST00000521147 UACAQ9BZF9 1416 aa13.17□□□□□ -0.3
CASC9-202ENST00000521147 FBXO41Q8TF61 875 aa13.17□□□□□ -0.3
CASC9-202ENST00000521147 IQGAP2Q13576 1575 aa13.16□□□□□ -0.3
CASC9-202ENST00000521147 CARMIL2Q6F5E8 1435 aa13.16□□□□□ -0.3
CASC9-202ENST00000521147 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
CASC9-202ENST00000521147 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
CASC9-202ENST00000521147 KIF27Q86VH2 1401 aa13.14□□□□□ -0.31
CASC9-202ENST00000521147 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
CASC9-202ENST00000521147 KCNA4P22459 653 aa13.13□□□□□ -0.31
CASC9-202ENST00000521147 DSG3P32926 999 aa13.13□□□□□ -0.31
CASC9-202ENST00000521147 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
CASC9-202ENST00000521147 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
CASC9-202ENST00000521147 KIAA0556O60303 1618 aa13.08□□□□□ -0.32
CASC9-202ENST00000521147 CFAP43Q8NDM7 1665 aa13.05□□□□□ -0.32
CASC9-202ENST00000521147 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
CASC9-202ENST00000521147 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
CASC9-202ENST00000521147 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
CASC9-202ENST00000521147 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
CASC9-202ENST00000521147 PTPRMP28827 1452 aa13.03□□□□□ -0.32
CASC9-202ENST00000521147 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
CASC9-202ENST00000521147 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
CASC9-202ENST00000521147 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
CASC9-202ENST00000521147 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
CASC9-202ENST00000521147 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
CASC9-202ENST00000521147 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
CASC9-202ENST00000521147 ABCA8O94911 1581 aa12.97□□□□□ -0.33
CASC9-202ENST00000521147 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.34
CASC9-202ENST00000521147 APLP2Q06481 763 aa12.95□□□□□ -0.34
CASC9-202ENST00000521147 POTEHQ6S545 545 aa12.95□□□□□ -0.34
CASC9-202ENST00000521147 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
CASC9-202ENST00000521147 RAPGEF2Q9Y4G8 1499 aa12.95□□□□□ -0.34
CASC9-202ENST00000521147 ARAP3Q8WWN8 1544 aa12.94□□□□□ -0.34
CASC9-202ENST00000521147 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
CASC9-202ENST00000521147 CTTNBP2Q8WZ74 1663 aa12.94□□□□□ -0.34
CASC9-202ENST00000521147 HSPA2P54652 639 aa12.94□□□□□ -0.34
CASC9-202ENST00000521147 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
CASC9-202ENST00000521147 FRMPD1Q5SYB0 1578 aa12.92□□□□□ -0.34
CASC9-202ENST00000521147 ABCB7O75027 752 aa12.91□□□□□ -0.34
CASC9-202ENST00000521147 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
CASC9-202ENST00000521147 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
CASC9-202ENST00000521147 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
CASC9-202ENST00000521147 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
CASC9-202ENST00000521147 SIGLEC1Q9BZZ2 1709 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms