RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
CLK4-206ENST00000520878 CHIC2Q9UKJ5 165 aa16.49■□□□□ 0.23
CLK4-206ENST00000520878 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
CLK4-206ENST00000520878 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
CLK4-206ENST00000520878 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
CLK4-206ENST00000520878 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
CLK4-206ENST00000520878 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
CLK4-206ENST00000520878 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.221e-8■■■□□ 18.8
CLK4-206ENST00000520878 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
CLK4-206ENST00000520878 SIN3AQ96ST3 1273 aa16.41■□□□□ 0.22
CLK4-206ENST00000520878 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
CLK4-206ENST00000520878 MIER1Q8N108 512 aa16.4■□□□□ 0.22
CLK4-206ENST00000520878 RRP7BPQ9NSQ0 103 aa16.39■□□□□ 0.21
CLK4-206ENST00000520878 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
CLK4-206ENST00000520878 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
CLK4-206ENST00000520878 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
CLK4-206ENST00000520878 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
CLK4-206ENST00000520878 DHX57Q6P158 1386 aaKnown RBP16.36■□□□□ 0.21
CLK4-206ENST00000520878 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
CLK4-206ENST00000520878 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
CLK4-206ENST00000520878 LRRC9Q6ZRR7 1453 aa16.32■□□□□ 0.2
CLK4-206ENST00000520878 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
CLK4-206ENST00000520878 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
CLK4-206ENST00000520878 CDK11AQ9UQ88 783 aaPredicted RBP16.29■□□□□ 0.2
CLK4-206ENST00000520878 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
CLK4-206ENST00000520878 CLSPNQ9HAW4 1339 aa16.27■□□□□ 0.19
CLK4-206ENST00000520878 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.19
CLK4-206ENST00000520878 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
CLK4-206ENST00000520878 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
CLK4-206ENST00000520878 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
CLK4-206ENST00000520878 TIAM1Q13009 1591 aa16.24■□□□□ 0.19
CLK4-206ENST00000520878 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
CLK4-206ENST00000520878 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
CLK4-206ENST00000520878 ZNF608Q9ULD9 1512 aaPredicted RBP16.21■□□□□ 0.18
CLK4-206ENST00000520878 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
CLK4-206ENST00000520878 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
CLK4-206ENST00000520878 CNGB1Q14028 1251 aaPredicted RBP16.18■□□□□ 0.18
CLK4-206ENST00000520878 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
CLK4-206ENST00000520878 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
CLK4-206ENST00000520878 JPH4Q96JJ6 628 aa16.17■□□□□ 0.18
CLK4-206ENST00000520878 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
CLK4-206ENST00000520878 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
CLK4-206ENST00000520878 POLR3GLQ9BT43 218 aa16.15■□□□□ 0.18
CLK4-206ENST00000520878 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
CLK4-206ENST00000520878 CUL7Q14999 1698 aa16.15■□□□□ 0.18
CLK4-206ENST00000520878 FOXD1Q16676 465 aa16.15■□□□□ 0.18
CLK4-206ENST00000520878 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.17
CLK4-206ENST00000520878 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
CLK4-206ENST00000520878 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
CLK4-206ENST00000520878 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
CLK4-206ENST00000520878 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
CLK4-206ENST00000520878 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
CLK4-206ENST00000520878 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
CLK4-206ENST00000520878 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
CLK4-206ENST00000520878 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
CLK4-206ENST00000520878 MYT1LQ9UL68 1186 aa16.08■□□□□ 0.16
CLK4-206ENST00000520878 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
CLK4-206ENST00000520878 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
CLK4-206ENST00000520878 PPP1R15AO75807 674 aaPredicted RBP16.03■□□□□ 0.16
CLK4-206ENST00000520878 CDK13Q14004 1512 aaKnown RBP16.03■□□□□ 0.16
CLK4-206ENST00000520878 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.16
CLK4-206ENST00000520878 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
CLK4-206ENST00000520878 ANP32CO43423 234 aa16.02■□□□□ 0.15
CLK4-206ENST00000520878 TSPY4P0CV99 314 aa16.02■□□□□ 0.15
CLK4-206ENST00000520878 TSPY10P0CW01 314 aa16.02■□□□□ 0.15
CLK4-206ENST00000520878 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
CLK4-206ENST00000520878 CCDC18Q5T9S5 1454 aa16.01■□□□□ 0.15
CLK4-206ENST00000520878 MPHOSPH9Q99550 1183 aa16■□□□□ 0.15
CLK4-206ENST00000520878 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
CLK4-206ENST00000520878 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
CLK4-206ENST00000520878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.153e-8■■■■□ 20.2
CLK4-206ENST00000520878 EPRSP07814 1512 aaKnown RBP15.97■□□□□ 0.15
CLK4-206ENST00000520878 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
CLK4-206ENST00000520878 PTPRKQ15262 1439 aa15.96■□□□□ 0.15
CLK4-206ENST00000520878 GRIN2AQ12879 1464 aa15.95■□□□□ 0.14
CLK4-206ENST00000520878 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
CLK4-206ENST00000520878 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
CLK4-206ENST00000520878 HNRNPMP52272 730 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLK4-206ENST00000520878 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
CLK4-206ENST00000520878 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
CLK4-206ENST00000520878 EHBP1L1Q8N3D4 1523 aa15.91■□□□□ 0.14
CLK4-206ENST00000520878 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
CLK4-206ENST00000520878 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
CLK4-206ENST00000520878 NAIPQ13075 1403 aa15.9■□□□□ 0.14
CLK4-206ENST00000520878 PTPRGP23470 1445 aa15.89■□□□□ 0.14
CLK4-206ENST00000520878 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLK4-206ENST00000520878 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
CLK4-206ENST00000520878 HFM1A2PYH4 1435 aa15.89■□□□□ 0.13
CLK4-206ENST00000520878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLK4-206ENST00000520878 CFAP43Q8NDM7 1665 aa15.88■□□□□ 0.13
CLK4-206ENST00000520878 WDR97A6NE52 1622 aa15.87■□□□□ 0.13
CLK4-206ENST00000520878 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
CLK4-206ENST00000520878 PKD2Q13563 968 aa15.87■□□□□ 0.13
CLK4-206ENST00000520878 MAPKBP1O60336 1514 aa15.87■□□□□ 0.13
CLK4-206ENST00000520878 SYNJ2O15056 1496 aa15.87■□□□□ 0.13
CLK4-206ENST00000520878 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
CLK4-206ENST00000520878 WDR62O43379 1518 aa15.86■□□□□ 0.13
CLK4-206ENST00000520878 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
CLK4-206ENST00000520878 BCANQ96GW7 911 aa15.86■□□□□ 0.13
CLK4-206ENST00000520878 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms