RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 SYNJ2O15056 1496 aa15.34■□□□□ 0.05
ZNF260-201ENST00000520608 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
ZNF260-201ENST00000520608 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
ZNF260-201ENST00000520608 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
ZNF260-201ENST00000520608 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
ZNF260-201ENST00000520608 ABCA10Q8WWZ4 1543 aa15.29■□□□□ 0.04
ZNF260-201ENST00000520608 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
ZNF260-201ENST00000520608 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
ZNF260-201ENST00000520608 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
ZNF260-201ENST00000520608 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
ZNF260-201ENST00000520608 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
ZNF260-201ENST00000520608 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
ZNF260-201ENST00000520608 CEP170Q5SW79 1584 aa15.14■□□□□ 0.01
ZNF260-201ENST00000520608 ERCC6L2Q5T890 1561 aa15.13■□□□□ 0.01
ZNF260-201ENST00000520608 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
ZNF260-201ENST00000520608 NUP160Q12769 1436 aa15.12■□□□□ 0.01
ZNF260-201ENST00000520608 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
ZNF260-201ENST00000520608 SHROOM2Q13796 1616 aa15.06■□□□□ 0
ZNF260-201ENST00000520608 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
ZNF260-201ENST00000520608 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
ZNF260-201ENST00000520608 JPH4Q96JJ6 628 aa14.97□□□□□ -0.01
ZNF260-201ENST00000520608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
ZNF260-201ENST00000520608 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
ZNF260-201ENST00000520608 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
ZNF260-201ENST00000520608 CUL7Q14999 1698 aa14.89□□□□□ -0.03
ZNF260-201ENST00000520608 KIF13AQ9H1H9 1805 aa14.88□□□□□ -0.03
ZNF260-201ENST00000520608 IGF1RP08069 1367 aa14.87□□□□□ -0.03
ZNF260-201ENST00000520608 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
ZNF260-201ENST00000520608 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
ZNF260-201ENST00000520608 ADCY10Q96PN6 1610 aa14.84□□□□□ -0.03
ZNF260-201ENST00000520608 FAM69CQ0P6D2 419 aa14.83□□□□□ -0.04
ZNF260-201ENST00000520608 POTEHQ6S545 545 aa14.83□□□□□ -0.04
ZNF260-201ENST00000520608 ABCC10Q5T3U5 1492 aa14.82□□□□□ -0.04
ZNF260-201ENST00000520608 MAPKBP1O60336 1514 aa14.82□□□□□ -0.04
ZNF260-201ENST00000520608 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
ZNF260-201ENST00000520608 CARMIL1Q5VZK9 1371 aa14.8□□□□□ -0.04
ZNF260-201ENST00000520608 DIP2BQ9P265 1576 aa14.79□□□□□ -0.04
ZNF260-201ENST00000520608 PTPRGP23470 1445 aa14.75□□□□□ -0.05
ZNF260-201ENST00000520608 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
ZNF260-201ENST00000520608 IQGAP2Q13576 1575 aa14.74□□□□□ -0.05
ZNF260-201ENST00000520608 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
ZNF260-201ENST00000520608 KDM6BO15054 1643 aa14.7□□□□□ -0.06
ZNF260-201ENST00000520608 TSPOAP1O95153 1857 aa14.7□□□□□ -0.06
ZNF260-201ENST00000520608 ABCC2Q92887 1545 aa14.69□□□□□ -0.06
ZNF260-201ENST00000520608 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
ZNF260-201ENST00000520608 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
ZNF260-201ENST00000520608 DISP1Q96F81 1524 aa14.65□□□□□ -0.06
ZNF260-201ENST00000520608 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
ZNF260-201ENST00000520608 UACAQ9BZF9 1416 aa14.64□□□□□ -0.07
ZNF260-201ENST00000520608 PLB1Q6P1J6 1458 aa14.63□□□□□ -0.07
ZNF260-201ENST00000520608 UHRF1BP1LA0JNW5 1464 aa14.63□□□□□ -0.07
ZNF260-201ENST00000520608 UGGT2Q9NYU1 1516 aa14.61□□□□□ -0.07
ZNF260-201ENST00000520608 KIAA0556O60303 1618 aa14.61□□□□□ -0.07
ZNF260-201ENST00000520608 GLI2P10070 1586 aa14.59□□□□□ -0.07
ZNF260-201ENST00000520608 ZCCHC11Q5TAX3 1644 aaKnown RBP14.57□□□□□ -0.08
ZNF260-201ENST00000520608 PPRC1Q5VV67 1664 aaKnown RBP14.57□□□□□ -0.08
ZNF260-201ENST00000520608 KDM5BQ9UGL1 1544 aa14.56□□□□□ -0.08
ZNF260-201ENST00000520608 CTTNBP2Q8WZ74 1663 aa14.56□□□□□ -0.08
ZNF260-201ENST00000520608 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
ZNF260-201ENST00000520608 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
ZNF260-201ENST00000520608 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.08
ZNF260-201ENST00000520608 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
ZNF260-201ENST00000520608 TEX14Q8IWB6 1497 aa14.5□□□□□ -0.09
ZNF260-201ENST00000520608 CAPN15O75808 1086 aa14.5□□□□□ -0.09
ZNF260-201ENST00000520608 DSG3P32926 999 aa14.5□□□□□ -0.09
ZNF260-201ENST00000520608 WDR7Q9Y4E6 1490 aa14.5□□□□□ -0.09
ZNF260-201ENST00000520608 PRXQ9BXM0 1461 aa14.47□□□□□ -0.09
ZNF260-201ENST00000520608 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
ZNF260-201ENST00000520608 COL17A1Q9UMD9 1497 aaPredicted RBP14.46□□□□□ -0.09
ZNF260-201ENST00000520608 ABCA8O94911 1581 aa14.46□□□□□ -0.09
ZNF260-201ENST00000520608 ADGRL1O94910 1474 aa14.45□□□□□ -0.1
ZNF260-201ENST00000520608 KCNH8Q96L42 1107 aa14.44□□□□□ -0.1
ZNF260-201ENST00000520608 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
ZNF260-201ENST00000520608 CD109Q6YHK3 1445 aa14.41□□□□□ -0.1
ZNF260-201ENST00000520608 ARID3CA6NKF2 412 aa14.41□□□□□ -0.1
ZNF260-201ENST00000520608 KCNA4P22459 653 aa14.41□□□□□ -0.1
ZNF260-201ENST00000520608 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
ZNF260-201ENST00000520608 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
ZNF260-201ENST00000520608 CFAP43Q8NDM7 1665 aa14.41□□□□□ -0.1
ZNF260-201ENST00000520608 MAGI3Q5TCQ9 1506 aa14.38□□□□□ -0.11
ZNF260-201ENST00000520608 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
ZNF260-201ENST00000520608 SAMD9Q5K651 1589 aa14.34□□□□□ -0.11
ZNF260-201ENST00000520608 ATP10BO94823 1461 aa14.33□□□□□ -0.12
ZNF260-201ENST00000520608 RANGAP1P46060 587 aaPredicted RBP14.33□□□□□ -0.12
ZNF260-201ENST00000520608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
ZNF260-201ENST00000520608 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
ZNF260-201ENST00000520608 RAPGEF6Q8TEU7 1601 aa14.31□□□□□ -0.12
ZNF260-201ENST00000520608 EEA1Q15075 1411 aa14.29□□□□□ -0.12
ZNF260-201ENST00000520608 KIF21BO75037 1637 aa14.29□□□□□ -0.12
ZNF260-201ENST00000520608 ABCA9Q8IUA7 1624 aa14.28□□□□□ -0.12
ZNF260-201ENST00000520608 HECW2Q9P2P5 1572 aa14.27□□□□□ -0.12
ZNF260-201ENST00000520608 ARAP3Q8WWN8 1544 aa14.27□□□□□ -0.12
ZNF260-201ENST00000520608 FHOD3Q2V2M9 1422 aa14.26□□□□□ -0.13
ZNF260-201ENST00000520608 NUP153P49790 1475 aaKnown RBP14.25□□□□□ -0.13
ZNF260-201ENST00000520608 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
ZNF260-201ENST00000520608 RAPGEF3O95398 923 aa14.22□□□□□ -0.13
ZNF260-201ENST00000520608 NEO1Q92859 1461 aa14.21□□□□□ -0.13
ZNF260-201ENST00000520608 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
ZNF260-201ENST00000520608 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
ZNF260-201ENST00000520608 PLEKHD1A6NEE1 506 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms