RNA–Protein interactions for RNA: ENST00000520495.5

MTCL1-209, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 2

Gene MTCL1, Length 3,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-209ENST00000520495 MAPKBP1O60336 1514 aa21.68■■□□□ 1.06
MTCL1-209ENST00000520495 CCNB3Q8WWL7 1395 aa21.67■■□□□ 1.06
MTCL1-209ENST00000520495 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
MTCL1-209ENST00000520495 IRX6P78412 446 aaPredicted RBP21.65■■□□□ 1.06
MTCL1-209ENST00000520495 RAB3GAP2Q9H2M9 1393 aa21.65■■□□□ 1.06
MTCL1-209ENST00000520495 ANO8Q9HCE9 1232 aaPredicted RBP21.63■■□□□ 1.05
MTCL1-209ENST00000520495 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
MTCL1-209ENST00000520495 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
MTCL1-209ENST00000520495 HIRIP3Q9BW71 556 aaPredicted RBP21.61■■□□□ 1.05
MTCL1-209ENST00000520495 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
MTCL1-209ENST00000520495 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
MTCL1-209ENST00000520495 P3H3Q8IVL6 736 aa21.55■■□□□ 1.04
MTCL1-209ENST00000520495 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
MTCL1-209ENST00000520495 HNRNPUQ00839 825 aaKnown RBP eCLIP21.53■■□□□ 1.04
MTCL1-209ENST00000520495 PPP4R2Q9NY27 417 aa21.53■■□□□ 1.04
MTCL1-209ENST00000520495 NBR1Q14596 966 aa21.51■■□□□ 1.03
MTCL1-209ENST00000520495 TIMELESSQ9UNS1 1208 aa21.51■■□□□ 1.03
MTCL1-209ENST00000520495 NOP58Q9Y2X3 529 aaKnown RBP21.51■■□□□ 1.03
MTCL1-209ENST00000520495 SETD5Q9C0A6 1442 aa21.49■■□□□ 1.03
MTCL1-209ENST00000520495 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
MTCL1-209ENST00000520495 CUX1P39880 1505 aa21.45■■□□□ 1.02
MTCL1-209ENST00000520495 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
MTCL1-209ENST00000520495 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
MTCL1-209ENST00000520495 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
MTCL1-209ENST00000520495 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
MTCL1-209ENST00000520495 CFTRP13569 1480 aa21.4■■□□□ 1.02
MTCL1-209ENST00000520495 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
MTCL1-209ENST00000520495 B4GALNT3Q6L9W6 998 aa21.39■■□□□ 1.01
MTCL1-209ENST00000520495 PRDM2Q13029 1718 aa21.34■■□□□ 1.01
MTCL1-209ENST00000520495 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
MTCL1-209ENST00000520495 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
MTCL1-209ENST00000520495 IL27Q8NEV9 243 aa21.28■■□□□ 1
MTCL1-209ENST00000520495 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
MTCL1-209ENST00000520495 CADPSQ9ULU8 1353 aa21.27■□□□□ 0.99
MTCL1-209ENST00000520495 FAM50AQ14320 339 aaKnown RBP21.26■□□□□ 0.99
MTCL1-209ENST00000520495 CCDC136Q96JN2 1154 aa21.26■□□□□ 0.99
MTCL1-209ENST00000520495 IPO9Q96P70 1041 aaKnown RBP21.26■□□□□ 0.99
MTCL1-209ENST00000520495 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
MTCL1-209ENST00000520495 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
MTCL1-209ENST00000520495 ANP32AP39687 249 aaKnown RBP21.23■□□□□ 0.99
MTCL1-209ENST00000520495 ZBTB47Q9UFB7 747 aaPredicted RBP21.21■□□□□ 0.99
MTCL1-209ENST00000520495 IGF1RP08069 1367 aa21.21■□□□□ 0.99
MTCL1-209ENST00000520495 PHLDB1Q86UU1 1377 aa21.21■□□□□ 0.99
MTCL1-209ENST00000520495 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
MTCL1-209ENST00000520495 RTN4Q9NQC3 1192 aaKnown RBP21.2■□□□□ 0.98
MTCL1-209ENST00000520495 NESP48681 1621 aa21.19■□□□□ 0.98
MTCL1-209ENST00000520495 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
MTCL1-209ENST00000520495 TIAM1Q13009 1591 aa21.17■□□□□ 0.98
MTCL1-209ENST00000520495 CCDC184Q52MB2 194 aa21.16■□□□□ 0.98
MTCL1-209ENST00000520495 MAP3K1Q13233 1512 aa21.16■□□□□ 0.98
MTCL1-209ENST00000520495 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
MTCL1-209ENST00000520495 LRRC9Q6ZRR7 1453 aa21.14■□□□□ 0.97
MTCL1-209ENST00000520495 ZBED9Q6R2W3 1325 aa21.13■□□□□ 0.97
MTCL1-209ENST00000520495 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.12■□□□□ 0.97
MTCL1-209ENST00000520495 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
MTCL1-209ENST00000520495 FAM9BQ8IZU0 186 aa21.12■□□□□ 0.97
MTCL1-209ENST00000520495 ARID3CA6NKF2 412 aa21.11■□□□□ 0.97
MTCL1-209ENST00000520495 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
MTCL1-209ENST00000520495 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
MTCL1-209ENST00000520495 UBE2Q2Q8WVN8 375 aa21.1■□□□□ 0.97
MTCL1-209ENST00000520495 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
MTCL1-209ENST00000520495 HSPA5P11021 654 aaKnown RBP21.04■□□□□ 0.96
MTCL1-209ENST00000520495 MRS2Q9HD23 443 aa21.03■□□□□ 0.96
MTCL1-209ENST00000520495 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
MTCL1-209ENST00000520495 PRKRIP1Q9H875 184 aaPredicted RBP21.02■□□□□ 0.96
MTCL1-209ENST00000520495 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
MTCL1-209ENST00000520495 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
MTCL1-209ENST00000520495 USP35Q9P2H5 1018 aa20.99■□□□□ 0.95
MTCL1-209ENST00000520495 C11orf95C9JLR9 678 aaPredicted RBP20.99■□□□□ 0.95
MTCL1-209ENST00000520495 NEFMP07197 916 aa20.98■□□□□ 0.95
MTCL1-209ENST00000520495 NCOA2Q15596 1464 aa20.97■□□□□ 0.95
MTCL1-209ENST00000520495 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
MTCL1-209ENST00000520495 AKNAQ7Z591 1439 aa20.96■□□□□ 0.95
MTCL1-209ENST00000520495 KDM5BQ9UGL1 1544 aa20.96■□□□□ 0.95
MTCL1-209ENST00000520495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.96■□□□□ 0.95
MTCL1-209ENST00000520495 UACAQ9BZF9 1416 aa20.95■□□□□ 0.94
MTCL1-209ENST00000520495 SMG6Q86US8 1419 aaKnown RBP20.95■□□□□ 0.94
MTCL1-209ENST00000520495 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
MTCL1-209ENST00000520495 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
MTCL1-209ENST00000520495 EIF4G2P78344 907 aaKnown RBP eCLIP20.94■□□□□ 0.94
MTCL1-209ENST00000520495 LAS1LQ9Y4W2 734 aaKnown RBP20.94■□□□□ 0.94
MTCL1-209ENST00000520495 NPM2Q86SE8 214 aaKnown RBP20.91■□□□□ 0.94
MTCL1-209ENST00000520495 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
MTCL1-209ENST00000520495 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
MTCL1-209ENST00000520495 NUDCQ9Y266 331 aa20.89■□□□□ 0.93
MTCL1-209ENST00000520495 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
MTCL1-209ENST00000520495 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
MTCL1-209ENST00000520495 PPM1GO15355 546 aaPredicted RBP20.86■□□□□ 0.93
MTCL1-209ENST00000520495 BRPF3Q9ULD4 1205 aa20.86■□□□□ 0.93
MTCL1-209ENST00000520495 CCDC7Q96M83 1385 aa20.85■□□□□ 0.93
MTCL1-209ENST00000520495 HFM1A2PYH4 1435 aa20.85■□□□□ 0.93
MTCL1-209ENST00000520495 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
MTCL1-209ENST00000520495 NCOA1Q15788 1441 aa20.82■□□□□ 0.92
MTCL1-209ENST00000520495 EIF5BO60841 1220 aaKnown RBP20.81■□□□□ 0.92
MTCL1-209ENST00000520495 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.924e-8■■■■□ 22.5
MTCL1-209ENST00000520495 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
MTCL1-209ENST00000520495 CHIC2Q9UKJ5 165 aa20.81■□□□□ 0.92
MTCL1-209ENST00000520495 PCF11O94913 1555 aaKnown RBP20.8■□□□□ 0.92
MTCL1-209ENST00000520495 FGD6Q6ZV73 1430 aa20.8■□□□□ 0.92
MTCL1-209ENST00000520495 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms