RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 RAB3GAP2Q9H2M9 1393 aa16.41■□□□□ 0.22
NUDCD1-203ENST00000519607 CFAP43Q8NDM7 1665 aa16.39■□□□□ 0.21
NUDCD1-203ENST00000519607 SETD5Q9C0A6 1442 aa16.39■□□□□ 0.21
NUDCD1-203ENST00000519607 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
NUDCD1-203ENST00000519607 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
NUDCD1-203ENST00000519607 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
NUDCD1-203ENST00000519607 CUL7Q14999 1698 aa16.34■□□□□ 0.21
NUDCD1-203ENST00000519607 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
NUDCD1-203ENST00000519607 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
NUDCD1-203ENST00000519607 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
NUDCD1-203ENST00000519607 PHLDB1Q86UU1 1377 aa16.33■□□□□ 0.21
NUDCD1-203ENST00000519607 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
NUDCD1-203ENST00000519607 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.2
NUDCD1-203ENST00000519607 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
NUDCD1-203ENST00000519607 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
NUDCD1-203ENST00000519607 CTTNBP2Q8WZ74 1663 aa16.31■□□□□ 0.2
NUDCD1-203ENST00000519607 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
NUDCD1-203ENST00000519607 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.2
NUDCD1-203ENST00000519607 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
NUDCD1-203ENST00000519607 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
NUDCD1-203ENST00000519607 CASKIN1Q8WXD9 1431 aa16.29■□□□□ 0.2
NUDCD1-203ENST00000519607 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
NUDCD1-203ENST00000519607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
NUDCD1-203ENST00000519607 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.2
NUDCD1-203ENST00000519607 FMN1Q68DA7 1419 aa16.27■□□□□ 0.19
NUDCD1-203ENST00000519607 MYT1Q01538 1121 aa16.24■□□□□ 0.19
NUDCD1-203ENST00000519607 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
NUDCD1-203ENST00000519607 NESP48681 1621 aa16.19■□□□□ 0.18
NUDCD1-203ENST00000519607 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
NUDCD1-203ENST00000519607 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
NUDCD1-203ENST00000519607 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
NUDCD1-203ENST00000519607 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
NUDCD1-203ENST00000519607 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
NUDCD1-203ENST00000519607 SUPT16HQ9Y5B9 1047 aaKnown RBP16.14■□□□□ 0.17
NUDCD1-203ENST00000519607 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
NUDCD1-203ENST00000519607 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
NUDCD1-203ENST00000519607 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
NUDCD1-203ENST00000519607 PPP1R15AO75807 674 aaPredicted RBP16.12■□□□□ 0.17
NUDCD1-203ENST00000519607 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
NUDCD1-203ENST00000519607 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
NUDCD1-203ENST00000519607 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
NUDCD1-203ENST00000519607 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
NUDCD1-203ENST00000519607 CCDC18Q5T9S5 1454 aa16.09■□□□□ 0.17
NUDCD1-203ENST00000519607 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
NUDCD1-203ENST00000519607 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
NUDCD1-203ENST00000519607 TONSLQ96HA7 1378 aa16.09■□□□□ 0.17
NUDCD1-203ENST00000519607 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
NUDCD1-203ENST00000519607 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
NUDCD1-203ENST00000519607 UACAQ9BZF9 1416 aa16.08■□□□□ 0.16
NUDCD1-203ENST00000519607 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
NUDCD1-203ENST00000519607 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
NUDCD1-203ENST00000519607 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
NUDCD1-203ENST00000519607 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
NUDCD1-203ENST00000519607 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
NUDCD1-203ENST00000519607 PTPN23Q9H3S7 1636 aa16.05■□□□□ 0.16
NUDCD1-203ENST00000519607 ANP32CO43423 234 aa16.03■□□□□ 0.16
NUDCD1-203ENST00000519607 CCER2I3L3R5 266 aa16.03■□□□□ 0.16
NUDCD1-203ENST00000519607 KCNH8Q96L42 1107 aa16.02■□□□□ 0.15
NUDCD1-203ENST00000519607 NAIPQ13075 1403 aa16■□□□□ 0.15
NUDCD1-203ENST00000519607 PTPRKQ15262 1439 aa16■□□□□ 0.15
NUDCD1-203ENST00000519607 UGGT2Q9NYU1 1516 aa15.99■□□□□ 0.15
NUDCD1-203ENST00000519607 HECW1Q76N89 1606 aa15.98■□□□□ 0.15
NUDCD1-203ENST00000519607 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
NUDCD1-203ENST00000519607 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
NUDCD1-203ENST00000519607 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
NUDCD1-203ENST00000519607 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
NUDCD1-203ENST00000519607 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
NUDCD1-203ENST00000519607 GCC2Q8IWJ2 1684 aa15.93■□□□□ 0.14
NUDCD1-203ENST00000519607 TCOF1Q13428 1488 aaKnown RBP15.93■□□□□ 0.14
NUDCD1-203ENST00000519607 NEFLP07196 543 aa15.92■□□□□ 0.14
NUDCD1-203ENST00000519607 AKNAQ7Z591 1439 aa15.91■□□□□ 0.14
NUDCD1-203ENST00000519607 MIA2Q96PC5 1412 aa15.9■□□□□ 0.14
NUDCD1-203ENST00000519607 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
NUDCD1-203ENST00000519607 MAGI3Q5TCQ9 1506 aa15.89■□□□□ 0.13
NUDCD1-203ENST00000519607 TRIM52Q96A61 297 aa15.88■□□□□ 0.13
NUDCD1-203ENST00000519607 RRP7BPQ9NSQ0 103 aa15.88■□□□□ 0.13
NUDCD1-203ENST00000519607 FKBP8Q14318 412 aa15.88■□□□□ 0.13
NUDCD1-203ENST00000519607 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
NUDCD1-203ENST00000519607 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
NUDCD1-203ENST00000519607 TSHZ2Q9NRE2 1034 aa15.84■□□□□ 0.13
NUDCD1-203ENST00000519607 WDR62O43379 1518 aa15.83■□□□□ 0.12
NUDCD1-203ENST00000519607 KDM5BQ9UGL1 1544 aa15.82■□□□□ 0.12
NUDCD1-203ENST00000519607 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
NUDCD1-203ENST00000519607 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
NUDCD1-203ENST00000519607 MPHOSPH9Q99550 1183 aa15.81■□□□□ 0.12
NUDCD1-203ENST00000519607 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
NUDCD1-203ENST00000519607 BCANQ96GW7 911 aa15.8■□□□□ 0.12
NUDCD1-203ENST00000519607 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
NUDCD1-203ENST00000519607 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
NUDCD1-203ENST00000519607 ROCK1Q13464 1354 aa15.78■□□□□ 0.12
NUDCD1-203ENST00000519607 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
NUDCD1-203ENST00000519607 KIAA0586Q9BVV6 1533 aa15.76■□□□□ 0.11
NUDCD1-203ENST00000519607 KDM6BO15054 1643 aa15.76■□□□□ 0.11
NUDCD1-203ENST00000519607 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
NUDCD1-203ENST00000519607 DAPK1P53355 1430 aa15.75■□□□□ 0.11
NUDCD1-203ENST00000519607 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
NUDCD1-203ENST00000519607 KIAA0556O60303 1618 aa15.74■□□□□ 0.11
NUDCD1-203ENST00000519607 DNMT1P26358 1616 aaKnown RBP15.74■□□□□ 0.11
NUDCD1-203ENST00000519607 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
NUDCD1-203ENST00000519607 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms