RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
CTNNA1-216ENST00000519489 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
CTNNA1-216ENST00000519489 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
CTNNA1-216ENST00000519489 ABCC10Q5T3U5 1492 aa13.8□□□□□ -0.2
CTNNA1-216ENST00000519489 KDM6BO15054 1643 aa13.79□□□□□ -0.2
CTNNA1-216ENST00000519489 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
CTNNA1-216ENST00000519489 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-216ENST00000519489 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
CTNNA1-216ENST00000519489 SOGA1O94964 1423 aa13.74□□□□□ -0.21
CTNNA1-216ENST00000519489 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-216ENST00000519489 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
CTNNA1-216ENST00000519489 DIP2BQ9P265 1576 aa13.71□□□□□ -0.22
CTNNA1-216ENST00000519489 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
CTNNA1-216ENST00000519489 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
CTNNA1-216ENST00000519489 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
CTNNA1-216ENST00000519489 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-216ENST00000519489 CCDC88BA6NC98 1476 aa13.64□□□□□ -0.23
CTNNA1-216ENST00000519489 COL17A1Q9UMD9 1497 aaPredicted RBP13.63□□□□□ -0.23
CTNNA1-216ENST00000519489 KCNA4P22459 653 aa13.62□□□□□ -0.23
CTNNA1-216ENST00000519489 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
CTNNA1-216ENST00000519489 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-216ENST00000519489 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
CTNNA1-216ENST00000519489 NUP160Q12769 1436 aa13.58□□□□□ -0.24
CTNNA1-216ENST00000519489 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
CTNNA1-216ENST00000519489 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
CTNNA1-216ENST00000519489 TSPOAP1O95153 1857 aa13.56□□□□□ -0.24
CTNNA1-216ENST00000519489 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
CTNNA1-216ENST00000519489 PRG4Q92954 1404 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-216ENST00000519489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■□□□□ 8
CTNNA1-216ENST00000519489 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTNNA1-216ENST00000519489 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
CTNNA1-216ENST00000519489 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-216ENST00000519489 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
CTNNA1-216ENST00000519489 CUX1P39880 1505 aa13.45□□□□□ -0.26
CTNNA1-216ENST00000519489 CERKQ8TCT0 537 aa13.45□□□□□ -0.26
CTNNA1-216ENST00000519489 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
CTNNA1-216ENST00000519489 SPATA31D1Q6ZQQ2 1576 aa13.42□□□□□ -0.26
CTNNA1-216ENST00000519489 ABCA5Q8WWZ7 1642 aa13.4□□□□□ -0.26
CTNNA1-216ENST00000519489 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
CTNNA1-216ENST00000519489 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
CTNNA1-216ENST00000519489 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
CTNNA1-216ENST00000519489 GLI2P10070 1586 aa13.32□□□□□ -0.28
CTNNA1-216ENST00000519489 PTPRMP28827 1452 aa13.31□□□□□ -0.28
CTNNA1-216ENST00000519489 HSPA2P54652 639 aa13.31□□□□□ -0.28
CTNNA1-216ENST00000519489 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
CTNNA1-216ENST00000519489 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
CTNNA1-216ENST00000519489 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-216ENST00000519489 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-216ENST00000519489 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
CTNNA1-216ENST00000519489 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-216ENST00000519489 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
CTNNA1-216ENST00000519489 KIF21BO75037 1637 aa13.21□□□□□ -0.3
CTNNA1-216ENST00000519489 ABCC2Q92887 1545 aa13.2□□□□□ -0.3
CTNNA1-216ENST00000519489 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
CTNNA1-216ENST00000519489 ADAMTSL3P82987 1691 aa13.18□□□□□ -0.3
CTNNA1-216ENST00000519489 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
CTNNA1-216ENST00000519489 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
CTNNA1-216ENST00000519489 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-216ENST00000519489 PTPRGP23470 1445 aa13.14□□□□□ -0.31
CTNNA1-216ENST00000519489 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
CTNNA1-216ENST00000519489 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
CTNNA1-216ENST00000519489 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
CTNNA1-216ENST00000519489 CUL7Q14999 1698 aa13.05□□□□□ -0.32
CTNNA1-216ENST00000519489 UHRF1BP1LA0JNW5 1464 aa13.05□□□□□ -0.32
CTNNA1-216ENST00000519489 KIAA0586Q9BVV6 1533 aa13.05□□□□□ -0.32
CTNNA1-216ENST00000519489 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
CTNNA1-216ENST00000519489 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
CTNNA1-216ENST00000519489 TNIKQ9UKE5 1360 aa13.02□□□□□ -0.33
CTNNA1-216ENST00000519489 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
CTNNA1-216ENST00000519489 BCORL1Q5H9F3 1711 aa13□□□□□ -0.33
CTNNA1-216ENST00000519489 CD109Q6YHK3 1445 aa13□□□□□ -0.33
CTNNA1-216ENST00000519489 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
CTNNA1-216ENST00000519489 CAPN15O75808 1086 aa12.97□□□□□ -0.33
CTNNA1-216ENST00000519489 LTBP4Q8N2S1 1624 aa12.96□□□□□ -0.33
CTNNA1-216ENST00000519489 ARAP3Q8WWN8 1544 aa12.95□□□□□ -0.34
CTNNA1-216ENST00000519489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-216ENST00000519489 RAPGEF3O95398 923 aa12.95□□□□□ -0.34
CTNNA1-216ENST00000519489 APLP2Q06481 763 aa12.95□□□□□ -0.34
CTNNA1-216ENST00000519489 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-216ENST00000519489 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
CTNNA1-216ENST00000519489 RIMS1Q86UR5 1692 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-216ENST00000519489 ARID4BQ4LE39 1312 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-216ENST00000519489 YEATS2Q9ULM3 1422 aa12.94□□□□□ -0.34
CTNNA1-216ENST00000519489 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-216ENST00000519489 MED1Q15648 1581 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-216ENST00000519489 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
CTNNA1-216ENST00000519489 DSG3P32926 999 aa12.91□□□□□ -0.34
CTNNA1-216ENST00000519489 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
CTNNA1-216ENST00000519489 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-216ENST00000519489 DISP1Q96F81 1524 aa12.88□□□□□ -0.35
CTNNA1-216ENST00000519489 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
CTNNA1-216ENST00000519489 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-216ENST00000519489 IGF1RP08069 1367 aa12.85□□□□□ -0.35
CTNNA1-216ENST00000519489 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
CTNNA1-216ENST00000519489 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
CTNNA1-216ENST00000519489 UBAP1LF5GYI3 381 aa12.84□□□□□ -0.35
CTNNA1-216ENST00000519489 HSPA1LP34931 641 aa12.84□□□□□ -0.35
CTNNA1-216ENST00000519489 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
CTNNA1-216ENST00000519489 PTPRTO14522 1441 aa12.83□□□□□ -0.36
CTNNA1-216ENST00000519489 CEBPAP49715 358 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms