RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 DNAJC5Q9H3Z4 198 aa34.49■■■■□ 3.11
TOP1MT-206ENST00000518951 CTTNBP2Q8WZ74 1663 aa34.48■■■■□ 3.11
TOP1MT-206ENST00000518951 GOLGA3Q08378 1498 aa34.46■■■■□ 3.11
TOP1MT-206ENST00000518951 SHROOM2Q13796 1616 aa34.42■■■■□ 3.1
TOP1MT-206ENST00000518951 IQGAP2Q13576 1575 aa34.41■■■■□ 3.1
TOP1MT-206ENST00000518951 JPH4Q96JJ6 628 aa34.39■■■■□ 3.1
TOP1MT-206ENST00000518951 UBTFP17480 764 aaKnown RBP34.34■■■■□ 3.09
TOP1MT-206ENST00000518951 ERCC6L2Q5T890 1561 aa34.3■■■■□ 3.08
TOP1MT-206ENST00000518951 ARHGEF11O15085 1522 aa34.3■■■■□ 3.08
TOP1MT-206ENST00000518951 RIMBP3CA6NJZ7 1639 aa34.27■■■■□ 3.08
TOP1MT-206ENST00000518951 RIMBP3BA6NNM3 1639 aa34.27■■■■□ 3.08
TOP1MT-206ENST00000518951 RIMBP3Q9UFD9 1639 aa34.27■■■■□ 3.08
TOP1MT-206ENST00000518951 PRG4Q92954 1404 aaPredicted RBP34.27■■■■□ 3.08
TOP1MT-206ENST00000518951 LOC105371045A0A1W2PR82 267 aa34.26■■■■□ 3.07
TOP1MT-206ENST00000518951 UGGT2Q9NYU1 1516 aa34.24■■■■□ 3.07
TOP1MT-206ENST00000518951 DISP1Q96F81 1524 aa34.16■■■■□ 3.06
TOP1MT-206ENST00000518951 TNIKQ9UKE5 1360 aa34.14■■■■□ 3.06
TOP1MT-206ENST00000518951 RANGAP1P46060 587 aaPredicted RBP34.14■■■■□ 3.06
TOP1MT-206ENST00000518951 KIAA0556O60303 1618 aa34.09■■■■□ 3.05
TOP1MT-206ENST00000518951 CARMIL2Q6F5E8 1435 aa34.08■■■■□ 3.05
TOP1MT-206ENST00000518951 ARAP1Q96P48 1450 aa34.07■■■■□ 3.04
TOP1MT-206ENST00000518951 SAMD9Q5K651 1589 aa34.06■■■■□ 3.04
TOP1MT-206ENST00000518951 P3H3Q8IVL6 736 aa34■■■■□ 3.03
TOP1MT-206ENST00000518951 CYB5RLQ6IPT4 315 aa33.96■■■■□ 3.03
TOP1MT-206ENST00000518951 EFCAB5A4FU69 1503 aa33.95■■■■□ 3.02
TOP1MT-206ENST00000518951 ARHGAP35Q9NRY4 1499 aa33.94■■■■□ 3.02
TOP1MT-206ENST00000518951 TTBK1Q5TCY1 1321 aaPredicted RBP33.94■■■■□ 3.02
TOP1MT-206ENST00000518951 PTPRGP23470 1445 aa33.91■■■■□ 3.02
TOP1MT-206ENST00000518951 FHOD3Q2V2M9 1422 aa33.89■■■■□ 3.02
TOP1MT-206ENST00000518951 CLIP1P30622 1438 aa33.87■■■■□ 3.01
TOP1MT-206ENST00000518951 CEP162Q5TB80 1403 aa33.86■■■■□ 3.01
TOP1MT-206ENST00000518951 PLB1Q6P1J6 1458 aa33.72■■■□□ 2.99
TOP1MT-206ENST00000518951 ADCY10Q96PN6 1610 aa33.71■■■□□ 2.99
TOP1MT-206ENST00000518951 UACAQ9BZF9 1416 aa33.7■■■□□ 2.99
TOP1MT-206ENST00000518951 ABCA8O94911 1581 aa33.69■■■□□ 2.98
TOP1MT-206ENST00000518951 ABCC2Q92887 1545 aa33.64■■■□□ 2.98
TOP1MT-206ENST00000518951 UHRF1BP1LA0JNW5 1464 aa33.63■■■□□ 2.97
TOP1MT-206ENST00000518951 RAPGEF6Q8TEU7 1601 aa33.62■■■□□ 2.97
TOP1MT-206ENST00000518951 FMN1Q68DA7 1419 aa33.61■■■□□ 2.97
TOP1MT-206ENST00000518951 NUP153P49790 1475 aaKnown RBP33.5■■■□□ 2.95
TOP1MT-206ENST00000518951 PCF11O94913 1555 aaKnown RBP33.49■■■□□ 2.95
TOP1MT-206ENST00000518951 KDM5BQ9UGL1 1544 aa33.49■■■□□ 2.95
TOP1MT-206ENST00000518951 ARID3CA6NKF2 412 aa33.47■■■□□ 2.95
TOP1MT-206ENST00000518951 ZCCHC11Q5TAX3 1644 aaKnown RBP33.46■■■□□ 2.95
TOP1MT-206ENST00000518951 CASKIN1Q8WXD9 1431 aa33.45■■■□□ 2.95
TOP1MT-206ENST00000518951 NPM1P06748 294 aaKnown RBP eCLIP33.44■■■□□ 2.94
TOP1MT-206ENST00000518951 LRRIQ1Q96JM4 1722 aa33.43■■■□□ 2.94
TOP1MT-206ENST00000518951 ATP10BO94823 1461 aa33.43■■■□□ 2.94
TOP1MT-206ENST00000518951 ATP1B4Q9UN42 357 aaPredicted RBP33.43■■■□□ 2.94
TOP1MT-206ENST00000518951 HECW1Q76N89 1606 aa33.42■■■□□ 2.94
TOP1MT-206ENST00000518951 VPS8Q8N3P4 1428 aa33.4■■■□□ 2.94
TOP1MT-206ENST00000518951 FYCO1Q9BQS8 1478 aa33.38■■■□□ 2.93
TOP1MT-206ENST00000518951 EPRSP07814 1512 aaKnown RBP33.35■■■□□ 2.93
TOP1MT-206ENST00000518951 CDK13Q14004 1512 aaKnown RBP33.35■■■□□ 2.93
TOP1MT-206ENST00000518951 MAPKBP1O60336 1514 aa33.33■■■□□ 2.93
TOP1MT-206ENST00000518951 ASXL2Q76L83 1435 aa33.28■■■□□ 2.92
TOP1MT-206ENST00000518951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.28■■■□□ 2.92
TOP1MT-206ENST00000518951 HNRNPUL2Q1KMD3 747 aaKnown RBP33.28■■■□□ 2.92
TOP1MT-206ENST00000518951 CCDC18Q5T9S5 1454 aa33.22■■■□□ 2.91
TOP1MT-206ENST00000518951 WDR7Q9Y4E6 1490 aa33.18■■■□□ 2.9
TOP1MT-206ENST00000518951 PLEKHD1A6NEE1 506 aa33.13■■■□□ 2.89
TOP1MT-206ENST00000518951 KIF13AQ9H1H9 1805 aa33.12■■■□□ 2.89
TOP1MT-206ENST00000518951 ABCC10Q5T3U5 1492 aa33.12■■■□□ 2.89
TOP1MT-206ENST00000518951 MAGI3Q5TCQ9 1506 aa33.11■■■□□ 2.89
TOP1MT-206ENST00000518951 DIP2BQ9P265 1576 aa33.11■■■□□ 2.89
TOP1MT-206ENST00000518951 CFAP43Q8NDM7 1665 aa33.11■■■□□ 2.89
TOP1MT-206ENST00000518951 KCNH8Q96L42 1107 aa33.1■■■□□ 2.89
TOP1MT-206ENST00000518951 TIAM1Q13009 1591 aa33.09■■■□□ 2.89
TOP1MT-206ENST00000518951 CDK11AQ9UQ88 783 aaPredicted RBP33.07■■■□□ 2.88
TOP1MT-206ENST00000518951 TRHP20396 242 aaPredicted RBP33.05■■■□□ 2.88
TOP1MT-206ENST00000518951 FAM69CQ0P6D2 419 aa33.04■■■□□ 2.88
TOP1MT-206ENST00000518951 TROQ12816 1431 aaPredicted RBP33.03■■■□□ 2.88
TOP1MT-206ENST00000518951 MAP3K1Q13233 1512 aa33.03■■■□□ 2.88
TOP1MT-206ENST00000518951 GLI2P10070 1586 aa33.01■■■□□ 2.87
TOP1MT-206ENST00000518951 KIF14Q15058 1648 aa32.98■■■□□ 2.87
TOP1MT-206ENST00000518951 KANK4Q5T7N3 995 aaPredicted RBP32.96■■■□□ 2.87
TOP1MT-206ENST00000518951 APLP2Q06481 763 aa32.95■■■□□ 2.87
TOP1MT-206ENST00000518951 MTUS2Q5JR59 1369 aa32.94■■■□□ 2.86
TOP1MT-206ENST00000518951 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
TOP1MT-206ENST00000518951 ABCA9Q8IUA7 1624 aa32.93■■■□□ 2.86
TOP1MT-206ENST00000518951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.93■■■□□ 2.86
TOP1MT-206ENST00000518951 EHBP1L1Q8N3D4 1523 aa32.92■■■□□ 2.86
TOP1MT-206ENST00000518951 MAP3K4Q9Y6R4 1608 aa32.91■■■□□ 2.86
TOP1MT-206ENST00000518951 TTC37Q6PGP7 1564 aa32.9■■■□□ 2.86
TOP1MT-206ENST00000518951 TSPOAP1O95153 1857 aa32.89■■■□□ 2.86
TOP1MT-206ENST00000518951 CD109Q6YHK3 1445 aa32.83■■■□□ 2.85
TOP1MT-206ENST00000518951 PPRC1Q5VV67 1664 aaKnown RBP32.83■■■□□ 2.85
TOP1MT-206ENST00000518951 SUPT6HQ7KZ85 1726 aaKnown RBP32.8■■■□□ 2.84
TOP1MT-206ENST00000518951 NCOA2Q15596 1464 aa32.76■■■□□ 2.83
TOP1MT-206ENST00000518951 MYO5CQ9NQX4 1742 aa32.76■■■□□ 2.83
TOP1MT-206ENST00000518951 PPARGC1BQ86YN6 1023 aaKnown RBP32.74■■■□□ 2.83
TOP1MT-206ENST00000518951 CDC42BPAQ5VT25 1732 aa32.74■■■□□ 2.83
TOP1MT-206ENST00000518951 CDC42BPBQ9Y5S2 1711 aa32.71■■■□□ 2.83
TOP1MT-206ENST00000518951 PLCH2O75038 1416 aa32.7■■■□□ 2.83
TOP1MT-206ENST00000518951 GPATCH8Q9UKJ3 1502 aaKnown RBP32.68■■■□□ 2.82
TOP1MT-206ENST00000518951 PREX2Q70Z35 1606 aa32.68■■■□□ 2.82
TOP1MT-206ENST00000518951 CCNB3Q8WWL7 1395 aa32.65■■■□□ 2.82
TOP1MT-206ENST00000518951 TEX14Q8IWB6 1497 aa32.63■■■□□ 2.81
TOP1MT-206ENST00000518951 ARAP3Q8WWN8 1544 aa32.63■■■□□ 2.81
TOP1MT-206ENST00000518951 ARHGAP5Q13017 1502 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms