RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
CTNNA1-210ENST00000518825 NESP48681 1621 aa12.43□□□□□ -0.42
CTNNA1-210ENST00000518825 RAB3GAP2Q9H2M9 1393 aa12.43□□□□□ -0.42
CTNNA1-210ENST00000518825 PCF11O94913 1555 aaKnown RBP12.42□□□□□ -0.42
CTNNA1-210ENST00000518825 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-210ENST00000518825 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
CTNNA1-210ENST00000518825 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
CTNNA1-210ENST00000518825 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
CTNNA1-210ENST00000518825 P3H3Q8IVL6 736 aa12.4□□□□□ -0.42
CTNNA1-210ENST00000518825 CFAP43Q8NDM7 1665 aa12.4□□□□□ -0.42
CTNNA1-210ENST00000518825 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
CTNNA1-210ENST00000518825 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
CTNNA1-210ENST00000518825 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
CTNNA1-210ENST00000518825 URB2Q14146 1524 aaKnown RBP12.34□□□□□ -0.43
CTNNA1-210ENST00000518825 WDR97A6NE52 1622 aa12.33□□□□□ -0.44
CTNNA1-210ENST00000518825 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
CTNNA1-210ENST00000518825 CUL7Q14999 1698 aa12.32□□□□□ -0.44
CTNNA1-210ENST00000518825 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
CTNNA1-210ENST00000518825 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
CTNNA1-210ENST00000518825 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
CTNNA1-210ENST00000518825 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
CTNNA1-210ENST00000518825 FAM50AQ14320 339 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-210ENST00000518825 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.449e-7■■■■□ 24.9
CTNNA1-210ENST00000518825 SIN3AQ96ST3 1273 aa12.3□□□□□ -0.44
CTNNA1-210ENST00000518825 SNAPC4Q5SXM2 1469 aa12.3□□□□□ -0.44
CTNNA1-210ENST00000518825 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
CTNNA1-210ENST00000518825 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-210ENST00000518825 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
CTNNA1-210ENST00000518825 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-210ENST00000518825 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
CTNNA1-210ENST00000518825 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
CTNNA1-210ENST00000518825 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
CTNNA1-210ENST00000518825 PTPRKQ15262 1439 aa12.25□□□□□ -0.45
CTNNA1-210ENST00000518825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTNNA1-210ENST00000518825 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
CTNNA1-210ENST00000518825 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
CTNNA1-210ENST00000518825 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
CTNNA1-210ENST00000518825 GRIN2BQ13224 1484 aa12.21□□□□□ -0.45
CTNNA1-210ENST00000518825 KIF21AQ7Z4S6 1674 aa12.2□□□□□ -0.46
CTNNA1-210ENST00000518825 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-210ENST00000518825 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
CTNNA1-210ENST00000518825 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
CTNNA1-210ENST00000518825 PPP1R15AO75807 674 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-210ENST00000518825 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-210ENST00000518825 HIRIP3Q9BW71 556 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-210ENST00000518825 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
CTNNA1-210ENST00000518825 MTUS2Q5JR59 1369 aa12.16□□□□□ -0.46
CTNNA1-210ENST00000518825 PTPN23Q9H3S7 1636 aa12.16□□□□□ -0.46
CTNNA1-210ENST00000518825 CCDC18Q5T9S5 1454 aa12.16□□□□□ -0.46
CTNNA1-210ENST00000518825 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-210ENST00000518825 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
CTNNA1-210ENST00000518825 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
CTNNA1-210ENST00000518825 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
CTNNA1-210ENST00000518825 NAIPQ13075 1403 aa12.15□□□□□ -0.47
CTNNA1-210ENST00000518825 MYOM3Q5VTT5 1437 aa12.14□□□□□ -0.47
CTNNA1-210ENST00000518825 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
CTNNA1-210ENST00000518825 THOC2Q8NI27 1593 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-210ENST00000518825 UGGT2Q9NYU1 1516 aa12.13□□□□□ -0.47
CTNNA1-210ENST00000518825 UACAQ9BZF9 1416 aa12.12□□□□□ -0.47
CTNNA1-210ENST00000518825 SUPT6HQ7KZ85 1726 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-210ENST00000518825 DENND4BO75064 1496 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-210ENST00000518825 EHBP1L1Q8N3D4 1523 aa12.11□□□□□ -0.47
CTNNA1-210ENST00000518825 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
CTNNA1-210ENST00000518825 KDM6BO15054 1643 aa12.08□□□□□ -0.48
CTNNA1-210ENST00000518825 TCOF1Q13428 1488 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-210ENST00000518825 ADAMTS12P58397 1594 aa12.06□□□□□ -0.48
CTNNA1-210ENST00000518825 EPRSP07814 1512 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-210ENST00000518825 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-210ENST00000518825 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
CTNNA1-210ENST00000518825 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
CTNNA1-210ENST00000518825 RRP7BPQ9NSQ0 103 aa12.04□□□□□ -0.48
CTNNA1-210ENST00000518825 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
CTNNA1-210ENST00000518825 CHIC2Q9UKJ5 165 aa12.03□□□□□ -0.48
CTNNA1-210ENST00000518825 WDR62O43379 1518 aa12.03□□□□□ -0.48
CTNNA1-210ENST00000518825 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
CTNNA1-210ENST00000518825 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-210ENST00000518825 ARID3CA6NKF2 412 aa12□□□□□ -0.49
CTNNA1-210ENST00000518825 CCER2I3L3R5 266 aa11.99□□□□□ -0.49
CTNNA1-210ENST00000518825 MRC2Q9UBG0 1479 aa11.99□□□□□ -0.49
CTNNA1-210ENST00000518825 DISP1Q96F81 1524 aa11.98□□□□□ -0.49
CTNNA1-210ENST00000518825 AKNAQ7Z591 1439 aa11.98□□□□□ -0.49
CTNNA1-210ENST00000518825 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
CTNNA1-210ENST00000518825 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
CTNNA1-210ENST00000518825 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
CTNNA1-210ENST00000518825 ANP32CO43423 234 aa11.95□□□□□ -0.5
CTNNA1-210ENST00000518825 FOXD1Q16676 465 aa11.95□□□□□ -0.5
CTNNA1-210ENST00000518825 WASHC2AQ641Q2 1341 aa11.95□□□□□ -0.5
CTNNA1-210ENST00000518825 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
CTNNA1-210ENST00000518825 NUP153P49790 1475 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-210ENST00000518825 MPHOSPH9Q99550 1183 aa11.94□□□□□ -0.5
CTNNA1-210ENST00000518825 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-210ENST00000518825 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-210ENST00000518825 KIAA0586Q9BVV6 1533 aa11.92□□□□□ -0.5
CTNNA1-210ENST00000518825 ABCC5O15440 1437 aa11.92□□□□□ -0.5
CTNNA1-210ENST00000518825 DAPK1P53355 1430 aa11.92□□□□□ -0.5
CTNNA1-210ENST00000518825 MYT1Q01538 1121 aa11.92□□□□□ -0.5
CTNNA1-210ENST00000518825 FKBP8Q14318 412 aa11.92□□□□□ -0.5
CTNNA1-210ENST00000518825 BCANQ96GW7 911 aa11.92□□□□□ -0.5
CTNNA1-210ENST00000518825 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
CTNNA1-210ENST00000518825 C11orf95C9JLR9 678 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms