RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 GAPVD1Q14C86 1478 aa9.35□□□□□ -0.91
PVT1-205ENST00000517790 SYNJ1O43426 1573 aa9.35□□□□□ -0.91
PVT1-205ENST00000517790 CHMP7Q8WUX9 453 aaPredicted RBP9.35□□□□□ -0.91
PVT1-205ENST00000517790 TULP1O00294 542 aaPredicted RBP9.34□□□□□ -0.91
PVT1-205ENST00000517790 FOXD4L1Q9NU39 408 aa9.33□□□□□ -0.92
PVT1-205ENST00000517790 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
PVT1-205ENST00000517790 ERCC6L2Q5T890 1561 aa9.31□□□□□ -0.92
PVT1-205ENST00000517790 SOGA1O94964 1423 aa9.31□□□□□ -0.92
PVT1-205ENST00000517790 KIF13AQ9H1H9 1805 aa9.29□□□□□ -0.92
PVT1-205ENST00000517790 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
PVT1-205ENST00000517790 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
PVT1-205ENST00000517790 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
PVT1-205ENST00000517790 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
PVT1-205ENST00000517790 KDM4FA0A1W2PPD8 638 aa9.27□□□□□ -0.93
PVT1-205ENST00000517790 GRIN2BQ13224 1484 aa9.26□□□□□ -0.93
PVT1-205ENST00000517790 FGD5Q6ZNL6 1462 aa9.26□□□□□ -0.93
PVT1-205ENST00000517790 PBRM1Q86U86 1689 aa9.23□□□□□ -0.93
PVT1-205ENST00000517790 WDR97A6NE52 1622 aa9.22□□□□□ -0.93
PVT1-205ENST00000517790 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
PVT1-205ENST00000517790 CUX1P39880 1505 aa9.21□□□□□ -0.94
PVT1-205ENST00000517790 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
PVT1-205ENST00000517790 FAM69CQ0P6D2 419 aa9.17□□□□□ -0.94
PVT1-205ENST00000517790 MYT1Q01538 1121 aa9.16□□□□□ -0.94
PVT1-205ENST00000517790 GRIN2AQ12879 1464 aa9.15□□□□□ -0.94
PVT1-205ENST00000517790 KDM6BO15054 1643 aa9.14□□□□□ -0.95
PVT1-205ENST00000517790 SHROOM2Q13796 1616 aa9.14□□□□□ -0.95
PVT1-205ENST00000517790 ABCA5Q8WWZ7 1642 aa9.14□□□□□ -0.95
PVT1-205ENST00000517790 TSPOAP1O95153 1857 aa9.14□□□□□ -0.95
PVT1-205ENST00000517790 ABCC10Q5T3U5 1492 aa9.14□□□□□ -0.95
PVT1-205ENST00000517790 NUP160Q12769 1436 aa9.13□□□□□ -0.95
PVT1-205ENST00000517790 DIP2BQ9P265 1576 aa9.12□□□□□ -0.95
PVT1-205ENST00000517790 RANGAP1P46060 587 aaPredicted RBP9.12□□□□□ -0.95
PVT1-205ENST00000517790 PRG4Q92954 1404 aaPredicted RBP9.1□□□□□ -0.95
PVT1-205ENST00000517790 ADAMTS12P58397 1594 aa9.1□□□□□ -0.95
PVT1-205ENST00000517790 ABCA10Q8WWZ4 1543 aa9.1□□□□□ -0.95
PVT1-205ENST00000517790 HECW2Q9P2P5 1572 aa9.09□□□□□ -0.95
PVT1-205ENST00000517790 ADGRL1O94910 1474 aa9.08□□□□□ -0.96
PVT1-205ENST00000517790 MAPKBP1O60336 1514 aa9.07□□□□□ -0.96
PVT1-205ENST00000517790 ADCY10Q96PN6 1610 aa9.06□□□□□ -0.96
PVT1-205ENST00000517790 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
PVT1-205ENST00000517790 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
PVT1-205ENST00000517790 JPH4Q96JJ6 628 aa9.05□□□□□ -0.96
PVT1-205ENST00000517790 FHAD1B1AJZ9 1412 aa9.04□□□□□ -0.96
PVT1-205ENST00000517790 TTBK1Q5TCY1 1321 aaPredicted RBP9.02□□□□□ -0.97
PVT1-205ENST00000517790 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
PVT1-205ENST00000517790 FBXO41Q8TF61 875 aa9□□□□□ -0.97
PVT1-205ENST00000517790 CNKSR2Q8WXI2 1034 aa9□□□□□ -0.97
PVT1-205ENST00000517790 PPRC1Q5VV67 1664 aaKnown RBP9□□□□□ -0.97
PVT1-205ENST00000517790 RUSC2Q8N2Y8 1516 aa8.99□□□□□ -0.97
PVT1-205ENST00000517790 COL17A1Q9UMD9 1497 aaPredicted RBP8.98□□□□□ -0.97
PVT1-205ENST00000517790 FOXD1Q16676 465 aa8.98□□□□□ -0.97
PVT1-205ENST00000517790 WRNQ14191 1432 aaPredicted RBP eCLIP8.97□□□□□ -0.97
PVT1-205ENST00000517790 ERICH3Q5RHP9 1530 aa8.96□□□□□ -0.97
PVT1-205ENST00000517790 ATXN8OSP0DMR3 200 aa8.94□□□□□ -0.98
PVT1-205ENST00000517790 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
PVT1-205ENST00000517790 PODXL2Q9NZ53 605 aa8.93□□□□□ -0.98
PVT1-205ENST00000517790 ASXL2Q76L83 1435 aa8.92□□□□□ -0.98
PVT1-205ENST00000517790 BIVM-ERCC5R4GMW8 1640 aa8.91□□□□□ -0.98
PVT1-205ENST00000517790 C14orf37Q86TY3 774 aa8.91□□□□□ -0.98
PVT1-205ENST00000517790 TOP2BQ02880 1626 aa8.91□□□□□ -0.98
PVT1-205ENST00000517790 LMTK3Q96Q04 1460 aa8.9□□□□□ -0.98
PVT1-205ENST00000517790 GLI2P10070 1586 aa8.9□□□□□ -0.99
PVT1-205ENST00000517790 PTPRGP23470 1445 aa8.88□□□□□ -0.99
PVT1-205ENST00000517790 CUL7Q14999 1698 aa8.88□□□□□ -0.99
PVT1-205ENST00000517790 APLP2Q06481 763 aa8.88□□□□□ -0.99
PVT1-205ENST00000517790 ABCC2Q92887 1545 aa8.88□□□□□ -0.99
PVT1-205ENST00000517790 KIAA0586Q9BVV6 1533 aa8.87□□□□□ -0.99
PVT1-205ENST00000517790 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
PVT1-205ENST00000517790 PLB1Q6P1J6 1458 aa8.87□□□□□ -0.99
PVT1-205ENST00000517790 MAP3K4Q9Y6R4 1608 aa8.87□□□□□ -0.99
PVT1-205ENST00000517790 EPRSP07814 1512 aaKnown RBP8.85□□□□□ -0.99
PVT1-205ENST00000517790 KIF21BO75037 1637 aa8.83□□□□□ -1
PVT1-205ENST00000517790 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.83□□□□□ -1
PVT1-205ENST00000517790 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
PVT1-205ENST00000517790 SOCS7O14512 581 aa8.82□□□□□ -1
PVT1-205ENST00000517790 BBXQ8WY36 941 aaPredicted RBP8.82□□□□□ -1
PVT1-205ENST00000517790 TNIKQ9UKE5 1360 aa8.82□□□□□ -1
PVT1-205ENST00000517790 UHRF1BP1LA0JNW5 1464 aa8.8□□□□□ -1
PVT1-205ENST00000517790 ZCCHC11Q5TAX3 1644 aaKnown RBP8.8□□□□□ -1
PVT1-205ENST00000517790 UACAQ9BZF9 1416 aa8.8□□□□□ -1
PVT1-205ENST00000517790 IGF1RP08069 1367 aa8.79□□□□□ -1
PVT1-205ENST00000517790 DISP3Q9P2K9 1392 aa8.79□□□□□ -1
PVT1-205ENST00000517790 PTPRMP28827 1452 aa8.78□□□□□ -1
PVT1-205ENST00000517790 KDM5BQ9UGL1 1544 aa8.78□□□□□ -1
PVT1-205ENST00000517790 CARMIL2Q6F5E8 1435 aa8.78□□□□□ -1
PVT1-205ENST00000517790 PAXIP1Q6ZW49 1069 aaPredicted RBP8.77□□□□□ -1.01
PVT1-205ENST00000517790 KLHL34Q8N239 644 aa8.77□□□□□ -1.01
PVT1-205ENST00000517790 ADAMTSL3P82987 1691 aa8.76□□□□□ -1.01
PVT1-205ENST00000517790 NBR1Q14596 966 aa8.76□□□□□ -1.01
PVT1-205ENST00000517790 FBXO3Q9UK99 471 aa8.76□□□□□ -1.01
PVT1-205ENST00000517790 DISP1Q96F81 1524 aa8.75□□□□□ -1.01
PVT1-205ENST00000517790 PCF11O94913 1555 aaKnown RBP8.75□□□□□ -1.01
PVT1-205ENST00000517790 HSPA2P54652 639 aa8.75□□□□□ -1.01
PVT1-205ENST00000517790 CD109Q6YHK3 1445 aa8.74□□□□□ -1.01
PVT1-205ENST00000517790 SUPT5HO00267 1087 aaKnown RBP8.74□□□□□ -1.01
PVT1-205ENST00000517790 KCNH8Q96L42 1107 aa8.74□□□□□ -1.01
PVT1-205ENST00000517790 WDR7Q9Y4E6 1490 aa8.74□□□□□ -1.01
PVT1-205ENST00000517790 IQGAP2Q13576 1575 aa8.73□□□□□ -1.01
PVT1-205ENST00000517790 PKD2Q13563 968 aa8.73□□□□□ -1.01
PVT1-205ENST00000517790 NPM2Q86SE8 214 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms