RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
PCM1-203ENST00000517545 SETD5Q9C0A6 1442 aa17.57■□□□□ 0.4
PCM1-203ENST00000517545 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
PCM1-203ENST00000517545 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
PCM1-203ENST00000517545 FAM50AQ14320 339 aaKnown RBP17.53■□□□□ 0.4
PCM1-203ENST00000517545 NEFLP07196 543 aa17.53■□□□□ 0.4
PCM1-203ENST00000517545 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
PCM1-203ENST00000517545 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
PCM1-203ENST00000517545 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
PCM1-203ENST00000517545 TIAM1Q13009 1591 aa17.5■□□□□ 0.39
PCM1-203ENST00000517545 LRRC9Q6ZRR7 1453 aa17.47■□□□□ 0.39
PCM1-203ENST00000517545 ANP32CO43423 234 aa17.46■□□□□ 0.39
PCM1-203ENST00000517545 CCER2I3L3R5 266 aa17.46■□□□□ 0.38
PCM1-203ENST00000517545 IGF1RP08069 1367 aa17.43■□□□□ 0.38
PCM1-203ENST00000517545 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
PCM1-203ENST00000517545 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
PCM1-203ENST00000517545 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
PCM1-203ENST00000517545 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
PCM1-203ENST00000517545 MSH5O43196 834 aa17.4■□□□□ 0.38
PCM1-203ENST00000517545 TIMELESSQ9UNS1 1208 aa17.4■□□□□ 0.38
PCM1-203ENST00000517545 CFTRP13569 1480 aa17.37■□□□□ 0.37
PCM1-203ENST00000517545 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
PCM1-203ENST00000517545 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
PCM1-203ENST00000517545 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
PCM1-203ENST00000517545 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
PCM1-203ENST00000517545 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
PCM1-203ENST00000517545 HNRNPUQ00839 825 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCM1-203ENST00000517545 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
PCM1-203ENST00000517545 FHOD3Q2V2M9 1422 aa17.27■□□□□ 0.36
PCM1-203ENST00000517545 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
PCM1-203ENST00000517545 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
PCM1-203ENST00000517545 FANCIQ9NVI1 1328 aa17.22■□□□□ 0.35
PCM1-203ENST00000517545 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
PCM1-203ENST00000517545 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
PCM1-203ENST00000517545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCM1-203ENST00000517545 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
PCM1-203ENST00000517545 NESP48681 1621 aa17.18■□□□□ 0.34
PCM1-203ENST00000517545 FYCO1Q9BQS8 1478 aa17.17■□□□□ 0.34
PCM1-203ENST00000517545 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
PCM1-203ENST00000517545 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
PCM1-203ENST00000517545 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
PCM1-203ENST00000517545 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
PCM1-203ENST00000517545 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
PCM1-203ENST00000517545 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.342e-8■■■■■ 51.7
PCM1-203ENST00000517545 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
PCM1-203ENST00000517545 HFM1A2PYH4 1435 aa17.15■□□□□ 0.34
PCM1-203ENST00000517545 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
PCM1-203ENST00000517545 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
PCM1-203ENST00000517545 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
PCM1-203ENST00000517545 NAIPQ13075 1403 aa17.11■□□□□ 0.33
PCM1-203ENST00000517545 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
PCM1-203ENST00000517545 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
PCM1-203ENST00000517545 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
PCM1-203ENST00000517545 B4GALNT3Q6L9W6 998 aa17.08■□□□□ 0.32
PCM1-203ENST00000517545 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
PCM1-203ENST00000517545 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
PCM1-203ENST00000517545 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
PCM1-203ENST00000517545 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
PCM1-203ENST00000517545 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
PCM1-203ENST00000517545 C11orf95C9JLR9 678 aaPredicted RBP17.04■□□□□ 0.32
PCM1-203ENST00000517545 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
PCM1-203ENST00000517545 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
PCM1-203ENST00000517545 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
PCM1-203ENST00000517545 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
PCM1-203ENST00000517545 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
PCM1-203ENST00000517545 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
PCM1-203ENST00000517545 CNTLNQ9NXG0 1405 aa17.01■□□□□ 0.31
PCM1-203ENST00000517545 PRKRIP1Q9H875 184 aaPredicted RBP17.01■□□□□ 0.31
PCM1-203ENST00000517545 DENND4BO75064 1496 aaPredicted RBP17■□□□□ 0.31
PCM1-203ENST00000517545 MRS2Q9HD23 443 aa17■□□□□ 0.31
PCM1-203ENST00000517545 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
PCM1-203ENST00000517545 FOXD1Q16676 465 aa16.97■□□□□ 0.31
PCM1-203ENST00000517545 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
PCM1-203ENST00000517545 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
PCM1-203ENST00000517545 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
PCM1-203ENST00000517545 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
PCM1-203ENST00000517545 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
PCM1-203ENST00000517545 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
PCM1-203ENST00000517545 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
PCM1-203ENST00000517545 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
PCM1-203ENST00000517545 NCOA1Q15788 1441 aa16.93■□□□□ 0.3
PCM1-203ENST00000517545 KDM6BO15054 1643 aa16.92■□□□□ 0.3
PCM1-203ENST00000517545 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
PCM1-203ENST00000517545 MPHOSPH9Q99550 1183 aa16.92■□□□□ 0.3
PCM1-203ENST00000517545 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
PCM1-203ENST00000517545 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
PCM1-203ENST00000517545 NBR1Q14596 966 aa16.9■□□□□ 0.3
PCM1-203ENST00000517545 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
PCM1-203ENST00000517545 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
PCM1-203ENST00000517545 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.3
PCM1-203ENST00000517545 CUL7Q14999 1698 aa16.89■□□□□ 0.3
PCM1-203ENST00000517545 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
PCM1-203ENST00000517545 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
PCM1-203ENST00000517545 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
PCM1-203ENST00000517545 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
PCM1-203ENST00000517545 MAGI3Q5TCQ9 1506 aa16.89■□□□□ 0.29
PCM1-203ENST00000517545 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
PCM1-203ENST00000517545 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
PCM1-203ENST00000517545 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
PCM1-203ENST00000517545 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms