RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 ADCY10Q96PN6 1610 aa5.16□□□□□ -1.58
RNU1-48P-201ENST00000516400 PBRM1Q86U86 1689 aa5.16□□□□□ -1.58
RNU1-48P-201ENST00000516400 CERKQ8TCT0 537 aa5.15□□□□□ -1.59
RNU1-48P-201ENST00000516400 CHMP7Q8WUX9 453 aaPredicted RBP5.15□□□□□ -1.59
RNU1-48P-201ENST00000516400 ADAMTSL3P82987 1691 aa5.15□□□□□ -1.59
RNU1-48P-201ENST00000516400 NUP160Q12769 1436 aa5.14□□□□□ -1.59
RNU1-48P-201ENST00000516400 TOP2BQ02880 1626 aa5.14□□□□□ -1.59
RNU1-48P-201ENST00000516400 GLI2P10070 1586 aa5.13□□□□□ -1.59
RNU1-48P-201ENST00000516400 GRIN2BQ13224 1484 aa5.13□□□□□ -1.59
RNU1-48P-201ENST00000516400 SOGA1O94964 1423 aa5.12□□□□□ -1.59
RNU1-48P-201ENST00000516400 PCF11O94913 1555 aaKnown RBP5.12□□□□□ -1.59
RNU1-48P-201ENST00000516400 PHF23Q9BUL5 403 aaPredicted RBP5.11□□□□□ -1.59
RNU1-48P-201ENST00000516400 MAP3K4Q9Y6R4 1608 aa5.1□□□□□ -1.59
RNU1-48P-201ENST00000516400 STRCQ7RTU9 1775 aa5.09□□□□□ -1.59
RNU1-48P-201ENST00000516400 ABCA5Q8WWZ7 1642 aa5.09□□□□□ -1.59
RNU1-48P-201ENST00000516400 PTPRMP28827 1452 aa5.09□□□□□ -1.59
RNU1-48P-201ENST00000516400 GRIN2AQ12879 1464 aa5.09□□□□□ -1.59
RNU1-48P-201ENST00000516400 TOP2AP11388 1531 aaKnown RBP5.08□□□□□ -1.6
RNU1-48P-201ENST00000516400 KIF21BO75037 1637 aa5.08□□□□□ -1.6
RNU1-48P-201ENST00000516400 CCDC88BA6NC98 1476 aa5.07□□□□□ -1.6
RNU1-48P-201ENST00000516400 FGD5Q6ZNL6 1462 aa5.07□□□□□ -1.6
RNU1-48P-201ENST00000516400 PRG4Q92954 1404 aaPredicted RBP5.06□□□□□ -1.6
RNU1-48P-201ENST00000516400 LTBP4Q8N2S1 1624 aa5.05□□□□□ -1.6
RNU1-48P-201ENST00000516400 BCORL1Q5H9F3 1711 aa5.04□□□□□ -1.6
RNU1-48P-201ENST00000516400 ADAMTS12P58397 1594 aa5.04□□□□□ -1.6
RNU1-48P-201ENST00000516400 CUX1P39880 1505 aa5.02□□□□□ -1.61
RNU1-48P-201ENST00000516400 MADDQ8WXG6 1647 aa5.02□□□□□ -1.61
RNU1-48P-201ENST00000516400 JPH4Q96JJ6 628 aa5.02□□□□□ -1.61
RNU1-48P-201ENST00000516400 HSPA2P54652 639 aa5.01□□□□□ -1.61
RNU1-48P-201ENST00000516400 CUL7Q14999 1698 aa5.01□□□□□ -1.61
RNU1-48P-201ENST00000516400 ABCA10Q8WWZ4 1543 aa5.01□□□□□ -1.61
RNU1-48P-201ENST00000516400 MED1Q15648 1581 aaPredicted RBP5□□□□□ -1.61
RNU1-48P-201ENST00000516400 EPRSP07814 1512 aaKnown RBP5□□□□□ -1.61
RNU1-48P-201ENST00000516400 RUSC2Q8N2Y8 1516 aa5□□□□□ -1.61
RNU1-48P-201ENST00000516400 SIGLEC1Q9BZZ2 1709 aa5□□□□□ -1.61
RNU1-48P-201ENST00000516400 ASXL2Q76L83 1435 aa4.99□□□□□ -1.61
RNU1-48P-201ENST00000516400 ABCC2Q92887 1545 aa4.99□□□□□ -1.61
RNU1-48P-201ENST00000516400 NPM1P06748 294 aaKnown RBP eCLIP4.99□□□□□ -1.61
RNU1-48P-201ENST00000516400 IQSEC2Q5JU85 1478 aa4.99□□□□□ -1.61
RNU1-48P-201ENST00000516400 KIAA0586Q9BVV6 1533 aa4.98□□□□□ -1.61
RNU1-48P-201ENST00000516400 PLB1Q6P1J6 1458 aa4.98□□□□□ -1.61
RNU1-48P-201ENST00000516400 POTEDQ86YR6 584 aa4.97□□□□□ -1.61
RNU1-48P-201ENST00000516400 RIMS1Q86UR5 1692 aaKnown RBP4.96□□□□□ -1.61
RNU1-48P-201ENST00000516400 TEX14Q8IWB6 1497 aa4.95□□□□□ -1.62
RNU1-48P-201ENST00000516400 RGS17Q9UGC6 210 aaPredicted RBP4.95□□□□□ -1.62
RNU1-48P-201ENST00000516400 MAGI3Q5TCQ9 1506 aa4.95□□□□□ -1.62
RNU1-48P-201ENST00000516400 ARAP3Q8WWN8 1544 aa4.95□□□□□ -1.62
RNU1-48P-201ENST00000516400 FHAD1B1AJZ9 1412 aa4.95□□□□□ -1.62
RNU1-48P-201ENST00000516400 UHRF1BP1LA0JNW5 1464 aa4.94□□□□□ -1.62
RNU1-48P-201ENST00000516400 KDM5BQ9UGL1 1544 aa4.94□□□□□ -1.62
RNU1-48P-201ENST00000516400 CFAP43Q8NDM7 1665 aa4.94□□□□□ -1.62
RNU1-48P-201ENST00000516400 SETD1BQ9UPS6 1966 aaKnown RBP4.94□□□□□ -1.62
RNU1-48P-201ENST00000516400 PREX1Q8TCU6 1659 aa4.93□□□□□ -1.62
RNU1-48P-201ENST00000516400 YEATS2Q9ULM3 1422 aa4.93□□□□□ -1.62
RNU1-48P-201ENST00000516400 ZCCHC11Q5TAX3 1644 aaKnown RBP4.92□□□□□ -1.62
RNU1-48P-201ENST00000516400 ALKQ9UM73 1620 aa4.92□□□□□ -1.62
RNU1-48P-201ENST00000516400 ERICH3Q5RHP9 1530 aa4.92□□□□□ -1.62
RNU1-48P-201ENST00000516400 FRMPD1Q5SYB0 1578 aa4.91□□□□□ -1.62
RNU1-48P-201ENST00000516400 PTPRTO14522 1441 aa4.91□□□□□ -1.62
RNU1-48P-201ENST00000516400 TTC37Q6PGP7 1564 aa4.91□□□□□ -1.62
RNU1-48P-201ENST00000516400 FER1L4A9Z1Z3 1794 aa4.89□□□□□ -1.63
RNU1-48P-201ENST00000516400 FOXD1Q16676 465 aa4.88□□□□□ -1.63
RNU1-48P-201ENST00000516400 PTPRGP23470 1445 aa4.88□□□□□ -1.63
RNU1-48P-201ENST00000516400 SETD1AO15047 1707 aaKnown RBP4.87□□□□□ -1.63
RNU1-48P-201ENST00000516400 HSPA1LP34931 641 aa4.87□□□□□ -1.63
RNU1-48P-201ENST00000516400 RICTORQ6R327 1708 aa4.86□□□□□ -1.63
RNU1-48P-201ENST00000516400 DMRT2Q9Y5R5 561 aa4.86□□□□□ -1.63
RNU1-48P-201ENST00000516400 CD109Q6YHK3 1445 aa4.86□□□□□ -1.63
RNU1-48P-201ENST00000516400 UACAQ9BZF9 1416 aa4.85□□□□□ -1.63
RNU1-48P-201ENST00000516400 WDR7Q9Y4E6 1490 aa4.84□□□□□ -1.63
RNU1-48P-201ENST00000516400 BIVM-ERCC5R4GMW8 1640 aa4.83□□□□□ -1.64
RNU1-48P-201ENST00000516400 DISP1Q96F81 1524 aa4.83□□□□□ -1.64
RNU1-48P-201ENST00000516400 ARHGEF12Q9NZN5 1544 aa4.83□□□□□ -1.64
RNU1-48P-201ENST00000516400 TNIKQ9UKE5 1360 aa4.83□□□□□ -1.64
RNU1-48P-201ENST00000516400 RAPGEF3O95398 923 aa4.82□□□□□ -1.64
RNU1-48P-201ENST00000516400 POTEAQ6S8J7 498 aa4.82□□□□□ -1.64
RNU1-48P-201ENST00000516400 ARHGEF40Q8TER5 1519 aa4.82□□□□□ -1.64
RNU1-48P-201ENST00000516400 UBAP1LF5GYI3 381 aa4.81□□□□□ -1.64
RNU1-48P-201ENST00000516400 ABCA9Q8IUA7 1624 aa4.81□□□□□ -1.64
RNU1-48P-201ENST00000516400 NCOA1Q15788 1441 aa4.8□□□□□ -1.64
RNU1-48P-201ENST00000516400 C3P01024 1663 aa4.8□□□□□ -1.64
RNU1-48P-201ENST00000516400 UPF1Q92900 1129 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU1-48P-201ENST00000516400 EP400Q96L91 3159 aa4.8□□□□□ -1.64
RNU1-48P-201ENST00000516400 PHLDB1Q86UU1 1377 aa4.79□□□□□ -1.64
RNU1-48P-201ENST00000516400 ZNF335Q9H4Z2 1342 aaPredicted RBP4.79□□□□□ -1.64
RNU1-48P-201ENST00000516400 CEBPAP49715 358 aaPredicted RBP4.79□□□□□ -1.64
RNU1-48P-201ENST00000516400 WRNQ14191 1432 aaPredicted RBP eCLIP4.79□□□□□ -1.64
RNU1-48P-201ENST00000516400 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
RNU1-48P-201ENST00000516400 ZMYM4Q5VZL5 1548 aa4.78□□□□□ -1.64
RNU1-48P-201ENST00000516400 IFFO2Q5TF58 517 aa4.78□□□□□ -1.64
RNU1-48P-201ENST00000516400 NEO1Q92859 1461 aa4.77□□□□□ -1.65
RNU1-48P-201ENST00000516400 STRCP1A6NGW2 1772 aa4.77□□□□□ -1.65
RNU1-48P-201ENST00000516400 ABCA8O94911 1581 aa4.76□□□□□ -1.65
RNU1-48P-201ENST00000516400 FHOD3Q2V2M9 1422 aa4.76□□□□□ -1.65
RNU1-48P-201ENST00000516400 IGF1RP08069 1367 aa4.76□□□□□ -1.65
RNU1-48P-201ENST00000516400 UHRF1BP1Q6BDS2 1440 aa4.75□□□□□ -1.65
RNU1-48P-201ENST00000516400 XIRP1Q702N8 1843 aaKnown RBP4.75□□□□□ -1.65
RNU1-48P-201ENST00000516400 CAMSAP1Q5T5Y3 1602 aa4.75□□□□□ -1.65
RNU1-48P-201ENST00000516400 UTRNP46939 3433 aa4.75□□□□□ -1.65
RNU1-48P-201ENST00000516400 FANCAO15360 1455 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms