RNA–Protein interactions for RNA: ENST00000515171.5

ABLIM3-209, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 2

Gene ABLIM3, Length 4,178 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-209ENST00000515171 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
ABLIM3-209ENST00000515171 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
ABLIM3-209ENST00000515171 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
ABLIM3-209ENST00000515171 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
ABLIM3-209ENST00000515171 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
ABLIM3-209ENST00000515171 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.23
ABLIM3-209ENST00000515171 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.23
ABLIM3-209ENST00000515171 HIRIP3Q9BW71 556 aaPredicted RBP13.58□□□□□ -0.23
ABLIM3-209ENST00000515171 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
ABLIM3-209ENST00000515171 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
ABLIM3-209ENST00000515171 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
ABLIM3-209ENST00000515171 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
ABLIM3-209ENST00000515171 ERICH3Q5RHP9 1530 aa13.55□□□□□ -0.24
ABLIM3-209ENST00000515171 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
ABLIM3-209ENST00000515171 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
ABLIM3-209ENST00000515171 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
ABLIM3-209ENST00000515171 ZNF326Q5BKZ1 582 aaKnown RBP13.5□□□□□ -0.25
ABLIM3-209ENST00000515171 URB2Q14146 1524 aaKnown RBP13.5□□□□□ -0.25
ABLIM3-209ENST00000515171 MIER1Q8N108 512 aa13.5□□□□□ -0.25
ABLIM3-209ENST00000515171 DNMBPQ6XZF7 1577 aa13.5□□□□□ -0.25
ABLIM3-209ENST00000515171 RAB3GAP2Q9H2M9 1393 aa13.47□□□□□ -0.25
ABLIM3-209ENST00000515171 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.26
ABLIM3-209ENST00000515171 FMN1Q68DA7 1419 aa13.44□□□□□ -0.26
ABLIM3-209ENST00000515171 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
ABLIM3-209ENST00000515171 DDX10Q13206 875 aaKnown RBP13.43□□□□□ -0.26
ABLIM3-209ENST00000515171 KCNH8Q96L42 1107 aa13.43□□□□□ -0.26
ABLIM3-209ENST00000515171 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
ABLIM3-209ENST00000515171 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
ABLIM3-209ENST00000515171 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
ABLIM3-209ENST00000515171 GTF3C3Q9Y5Q9 886 aa13.41□□□□□ -0.26
ABLIM3-209ENST00000515171 FOXD1Q16676 465 aa13.39□□□□□ -0.27
ABLIM3-209ENST00000515171 SETD5Q9C0A6 1442 aa13.39□□□□□ -0.27
ABLIM3-209ENST00000515171 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
ABLIM3-209ENST00000515171 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
ABLIM3-209ENST00000515171 PLEKHD1A6NEE1 506 aa13.38□□□□□ -0.27
ABLIM3-209ENST00000515171 LRRC9Q6ZRR7 1453 aa13.38□□□□□ -0.27
ABLIM3-209ENST00000515171 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
ABLIM3-209ENST00000515171 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
ABLIM3-209ENST00000515171 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
ABLIM3-209ENST00000515171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
ABLIM3-209ENST00000515171 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
ABLIM3-209ENST00000515171 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.28
ABLIM3-209ENST00000515171 GRIN2BQ13224 1484 aa13.32□□□□□ -0.28
ABLIM3-209ENST00000515171 ZNF644Q9H582 1327 aaPredicted RBP13.31□□□□□ -0.28
ABLIM3-209ENST00000515171 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
ABLIM3-209ENST00000515171 KIF21AQ7Z4S6 1674 aa13.3□□□□□ -0.28
ABLIM3-209ENST00000515171 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
ABLIM3-209ENST00000515171 TIAM1Q13009 1591 aa13.3□□□□□ -0.28
ABLIM3-209ENST00000515171 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
ABLIM3-209ENST00000515171 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
ABLIM3-209ENST00000515171 TSPY4P0CV99 314 aa13.29□□□□□ -0.28
ABLIM3-209ENST00000515171 TSPY10P0CW01 314 aa13.29□□□□□ -0.28
ABLIM3-209ENST00000515171 CLSPNQ9HAW4 1339 aa13.28□□□□□ -0.28
ABLIM3-209ENST00000515171 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
ABLIM3-209ENST00000515171 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
ABLIM3-209ENST00000515171 ANP32CO43423 234 aa13.26□□□□□ -0.29
ABLIM3-209ENST00000515171 IFT140Q96RY7 1462 aa13.25□□□□□ -0.29
ABLIM3-209ENST00000515171 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
ABLIM3-209ENST00000515171 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
ABLIM3-209ENST00000515171 CARMIL2Q6F5E8 1435 aa13.24□□□□□ -0.29
ABLIM3-209ENST00000515171 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
ABLIM3-209ENST00000515171 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
ABLIM3-209ENST00000515171 CUL7Q14999 1698 aa13.22□□□□□ -0.29
ABLIM3-209ENST00000515171 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
ABLIM3-209ENST00000515171 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.3
ABLIM3-209ENST00000515171 BCANQ96GW7 911 aa13.21□□□□□ -0.3
ABLIM3-209ENST00000515171 MYOM3Q5VTT5 1437 aa13.2□□□□□ -0.3
ABLIM3-209ENST00000515171 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
ABLIM3-209ENST00000515171 MPHOSPH9Q99550 1183 aa13.19□□□□□ -0.3
ABLIM3-209ENST00000515171 RGL3Q3MIN7 710 aa13.18□□□□□ -0.3
ABLIM3-209ENST00000515171 CCDC18Q5T9S5 1454 aa13.17□□□□□ -0.3
ABLIM3-209ENST00000515171 PPP1R15AO75807 674 aaPredicted RBP13.17□□□□□ -0.3
ABLIM3-209ENST00000515171 IQGAP2Q13576 1575 aa13.16□□□□□ -0.3
ABLIM3-209ENST00000515171 SENP3-EIF4A1A0A087X0R7 540 aa13.16□□□□□ -0.3
ABLIM3-209ENST00000515171 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.3
ABLIM3-209ENST00000515171 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
ABLIM3-209ENST00000515171 PTPRGP23470 1445 aa13.15□□□□□ -0.3
ABLIM3-209ENST00000515171 NEFLP07196 543 aa13.14□□□□□ -0.31
ABLIM3-209ENST00000515171 PKD2Q13563 968 aa13.13□□□□□ -0.31
ABLIM3-209ENST00000515171 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
ABLIM3-209ENST00000515171 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
ABLIM3-209ENST00000515171 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
ABLIM3-209ENST00000515171 PLB1Q6P1J6 1458 aa13.12□□□□□ -0.31
ABLIM3-209ENST00000515171 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
ABLIM3-209ENST00000515171 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
ABLIM3-209ENST00000515171 KIAA0586Q9BVV6 1533 aa13.11□□□□□ -0.31
ABLIM3-209ENST00000515171 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
ABLIM3-209ENST00000515171 ABCA5Q8WWZ7 1642 aa13.09□□□□□ -0.31
ABLIM3-209ENST00000515171 CTTNBP2Q8WZ74 1663 aa13.09□□□□□ -0.31
ABLIM3-209ENST00000515171 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
ABLIM3-209ENST00000515171 HSPA5P11021 654 aaKnown RBP13.08□□□□□ -0.32
ABLIM3-209ENST00000515171 PTPRKQ15262 1439 aa13.08□□□□□ -0.32
ABLIM3-209ENST00000515171 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.32
ABLIM3-209ENST00000515171 NUP155O75694 1391 aa13.07□□□□□ -0.32
ABLIM3-209ENST00000515171 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
ABLIM3-209ENST00000515171 EHBP1L1Q8N3D4 1523 aa13.06□□□□□ -0.32
ABLIM3-209ENST00000515171 SYNJ2O15056 1496 aa13.06□□□□□ -0.32
ABLIM3-209ENST00000515171 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
ABLIM3-209ENST00000515171 MAP3K1Q13233 1512 aa13.05□□□□□ -0.32
ABLIM3-209ENST00000515171 ADAMTS12P58397 1594 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms