RNA–Protein interactions for RNA: ENST00000514915.5

NEK11-215, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-215ENST00000514915 RAPGEF2Q9Y4G8 1499 aa10.25□□□□□ -0.77
NEK11-215ENST00000514915 TARBP1Q13395 1621 aaKnown RBP10.24□□□□□ -0.77
NEK11-215ENST00000514915 RAD54L2Q9Y4B4 1467 aa10.24□□□□□ -0.77
NEK11-215ENST00000514915 THOC2Q8NI27 1593 aaKnown RBP10.24□□□□□ -0.77
NEK11-215ENST00000514915 HOMEZQ8IX15 550 aa10.23□□□□□ -0.77
NEK11-215ENST00000514915 ABCA5Q8WWZ7 1642 aa10.23□□□□□ -0.77
NEK11-215ENST00000514915 GTF3C3Q9Y5Q9 886 aa10.22□□□□□ -0.77
NEK11-215ENST00000514915 CUL7Q14999 1698 aa10.22□□□□□ -0.77
NEK11-215ENST00000514915 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.78
NEK11-215ENST00000514915 IGF1RP08069 1367 aa10.21□□□□□ -0.78
NEK11-215ENST00000514915 IFT140Q96RY7 1462 aa10.2□□□□□ -0.78
NEK11-215ENST00000514915 ERCC6Q03468 1493 aa10.19□□□□□ -0.78
NEK11-215ENST00000514915 RANGAP1P46060 587 aaPredicted RBP10.18□□□□□ -0.78
NEK11-215ENST00000514915 FBLN2P98095 1184 aa10.18□□□□□ -0.78
NEK11-215ENST00000514915 PCGF6Q9BYE7 350 aa10.18□□□□□ -0.78
NEK11-215ENST00000514915 CLIP1P30622 1438 aa10.17□□□□□ -0.78
NEK11-215ENST00000514915 CARMIL1Q5VZK9 1371 aa10.17□□□□□ -0.78
NEK11-215ENST00000514915 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.79
NEK11-215ENST00000514915 KDM2AQ9Y2K7 1162 aa10.15□□□□□ -0.79
NEK11-215ENST00000514915 GAPVD1Q14C86 1478 aa10.14□□□□□ -0.79
NEK11-215ENST00000514915 TDRD9Q8NDG6 1382 aaKnown RBP10.14□□□□□ -0.79
NEK11-215ENST00000514915 PBRM1Q86U86 1689 aa10.13□□□□□ -0.79
NEK11-215ENST00000514915 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
NEK11-215ENST00000514915 EIF5BO60841 1220 aaKnown RBP10.12□□□□□ -0.79
NEK11-215ENST00000514915 FKBP8Q14318 412 aa10.12□□□□□ -0.79
NEK11-215ENST00000514915 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
NEK11-215ENST00000514915 GRIN2BQ13224 1484 aa10.1□□□□□ -0.79
NEK11-215ENST00000514915 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
NEK11-215ENST00000514915 ADAMTS12P58397 1594 aa10.08□□□□□ -0.8
NEK11-215ENST00000514915 CTTNBP2Q8WZ74 1663 aa10.08□□□□□ -0.8
NEK11-215ENST00000514915 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
NEK11-215ENST00000514915 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
NEK11-215ENST00000514915 EIF4G3O43432 1585 aaKnown RBP10.06□□□□□ -0.8
NEK11-215ENST00000514915 AQRO60306 1485 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEK11-215ENST00000514915 ARAP1Q96P48 1450 aa10.04□□□□□ -0.8
NEK11-215ENST00000514915 MAGI1Q96QZ7 1491 aaPredicted RBP10.04□□□□□ -0.8
NEK11-215ENST00000514915 TTBK1Q5TCY1 1321 aaPredicted RBP10.04□□□□□ -0.8
NEK11-215ENST00000514915 C14orf37Q86TY3 774 aa10.04□□□□□ -0.8
NEK11-215ENST00000514915 EFCAB5A4FU69 1503 aa10.03□□□□□ -0.8
NEK11-215ENST00000514915 ZNF608Q9ULD9 1512 aaPredicted RBP10.03□□□□□ -0.8
NEK11-215ENST00000514915 ARHGAP35Q9NRY4 1499 aa10.03□□□□□ -0.8
NEK11-215ENST00000514915 NPM2Q86SE8 214 aaKnown RBP10.01□□□□□ -0.81
NEK11-215ENST00000514915 TMEM132AQ24JP5 1023 aa10□□□□□ -0.81
NEK11-215ENST00000514915 SAMD9Q5K651 1589 aa9.98□□□□□ -0.81
NEK11-215ENST00000514915 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
NEK11-215ENST00000514915 MAP3K1Q13233 1512 aa9.97□□□□□ -0.81
NEK11-215ENST00000514915 SNAPC4Q5SXM2 1469 aa9.97□□□□□ -0.81
NEK11-215ENST00000514915 P3H3Q8IVL6 736 aa9.96□□□□□ -0.81
NEK11-215ENST00000514915 GRIN2AQ12879 1464 aa9.96□□□□□ -0.82
NEK11-215ENST00000514915 UGGT2Q9NYU1 1516 aa9.95□□□□□ -0.82
NEK11-215ENST00000514915 KIAA0586Q9BVV6 1533 aa9.94□□□□□ -0.82
NEK11-215ENST00000514915 HRCP23327 699 aa9.94□□□□□ -0.82
NEK11-215ENST00000514915 IQGAP2Q13576 1575 aa9.94□□□□□ -0.82
NEK11-215ENST00000514915 FHOD3Q2V2M9 1422 aa9.94□□□□□ -0.82
NEK11-215ENST00000514915 NUP160Q12769 1436 aa9.93□□□□□ -0.82
NEK11-215ENST00000514915 PPP6R1Q9UPN7 881 aa9.93□□□□□ -0.82
NEK11-215ENST00000514915 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
NEK11-215ENST00000514915 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
NEK11-215ENST00000514915 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
NEK11-215ENST00000514915 FMN1Q68DA7 1419 aa9.89□□□□□ -0.83
NEK11-215ENST00000514915 CEP170Q5SW79 1584 aa9.89□□□□□ -0.83
NEK11-215ENST00000514915 PCF11O94913 1555 aaKnown RBP9.88□□□□□ -0.83
NEK11-215ENST00000514915 FYCO1Q9BQS8 1478 aa9.88□□□□□ -0.83
NEK11-215ENST00000514915 CASKIN1Q8WXD9 1431 aa9.88□□□□□ -0.83
NEK11-215ENST00000514915 FOXD1Q16676 465 aa9.87□□□□□ -0.83
NEK11-215ENST00000514915 CFAP43Q8NDM7 1665 aa9.87□□□□□ -0.83
NEK11-215ENST00000514915 TIAM1Q13009 1591 aa9.87□□□□□ -0.83
NEK11-215ENST00000514915 MYT1Q01538 1121 aa9.85□□□□□ -0.83
NEK11-215ENST00000514915 KIAA0556O60303 1618 aa9.85□□□□□ -0.83
NEK11-215ENST00000514915 CHD1O14646 1710 aa9.84□□□□□ -0.83
NEK11-215ENST00000514915 SHROOM2Q13796 1616 aa9.84□□□□□ -0.83
NEK11-215ENST00000514915 ARID3CA6NKF2 412 aa9.84□□□□□ -0.83
NEK11-215ENST00000514915 DISP1Q96F81 1524 aa9.83□□□□□ -0.84
NEK11-215ENST00000514915 LRRC9Q6ZRR7 1453 aa9.83□□□□□ -0.84
NEK11-215ENST00000514915 TRHP20396 242 aaPredicted RBP9.82□□□□□ -0.84
NEK11-215ENST00000514915 HNRNPUL2Q1KMD3 747 aaKnown RBP9.81□□□□□ -0.84
NEK11-215ENST00000514915 CCDC18Q5T9S5 1454 aa9.8□□□□□ -0.84
NEK11-215ENST00000514915 HECW1Q76N89 1606 aa9.8□□□□□ -0.84
NEK11-215ENST00000514915 CARMIL2Q6F5E8 1435 aa9.79□□□□□ -0.84
NEK11-215ENST00000514915 CLASP1Q7Z460 1538 aa9.79□□□□□ -0.84
NEK11-215ENST00000514915 ZEB1P37275 1124 aaPredicted RBP9.78□□□□□ -0.84
NEK11-215ENST00000514915 JPH4Q96JJ6 628 aa9.78□□□□□ -0.84
NEK11-215ENST00000514915 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
NEK11-215ENST00000514915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.77□□□□□ -0.85
NEK11-215ENST00000514915 LRRIQ1Q96JM4 1722 aa9.76□□□□□ -0.85
NEK11-215ENST00000514915 MTUS2Q5JR59 1369 aa9.76□□□□□ -0.85
NEK11-215ENST00000514915 CCNB3Q8WWL7 1395 aa9.76□□□□□ -0.85
NEK11-215ENST00000514915 RAPGEF6Q8TEU7 1601 aa9.76□□□□□ -0.85
NEK11-215ENST00000514915 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
NEK11-215ENST00000514915 PHLDB1Q86UU1 1377 aa9.75□□□□□ -0.85
NEK11-215ENST00000514915 EHBP1L1Q8N3D4 1523 aa9.74□□□□□ -0.85
NEK11-215ENST00000514915 ABCA8O94911 1581 aa9.74□□□□□ -0.85
NEK11-215ENST00000514915 EPRSP07814 1512 aaKnown RBP9.73□□□□□ -0.85
NEK11-215ENST00000514915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.73□□□□□ -0.85
NEK11-215ENST00000514915 ARHGEF11O15085 1522 aa9.72□□□□□ -0.85
NEK11-215ENST00000514915 CDK13Q14004 1512 aaKnown RBP9.71□□□□□ -0.85
NEK11-215ENST00000514915 ITGAEP38570 1179 aa9.71□□□□□ -0.86
NEK11-215ENST00000514915 PRG4Q92954 1404 aaPredicted RBP9.71□□□□□ -0.86
NEK11-215ENST00000514915 FAM50AQ14320 339 aaKnown RBP9.7□□□□□ -0.86
NEK11-215ENST00000514915 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms