RNA–Protein interactions for RNA: ENST00000513748.1

NXPH3-202, Transcript of neurexophilin 3, humanhuman

TSL 1 (best) BASIC

Gene NXPH3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPH3-202ENST00000513748 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
NXPH3-202ENST00000513748 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
NXPH3-202ENST00000513748 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
NXPH3-202ENST00000513748 CLIP1P30622 1438 aa22.87■■□□□ 1.25
NXPH3-202ENST00000513748 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
NXPH3-202ENST00000513748 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
NXPH3-202ENST00000513748 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
NXPH3-202ENST00000513748 CUL7Q14999 1698 aa22.82■■□□□ 1.24
NXPH3-202ENST00000513748 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
NXPH3-202ENST00000513748 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
NXPH3-202ENST00000513748 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
NXPH3-202ENST00000513748 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
NXPH3-202ENST00000513748 VPS8Q8N3P4 1428 aa22.69■■□□□ 1.22
NXPH3-202ENST00000513748 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
NXPH3-202ENST00000513748 KIF13AQ9H1H9 1805 aa22.62■■□□□ 1.21
NXPH3-202ENST00000513748 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
NXPH3-202ENST00000513748 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
NXPH3-202ENST00000513748 ARHGAP35Q9NRY4 1499 aa22.58■■□□□ 1.21
NXPH3-202ENST00000513748 GRIN2AQ12879 1464 aa22.58■■□□□ 1.2
NXPH3-202ENST00000513748 NUP160Q12769 1436 aa22.55■■□□□ 1.2
NXPH3-202ENST00000513748 APLP2Q06481 763 aa22.54■■□□□ 1.2
NXPH3-202ENST00000513748 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
NXPH3-202ENST00000513748 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
NXPH3-202ENST00000513748 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
NXPH3-202ENST00000513748 ILDR1Q86SU0 546 aaPredicted RBP22.5■■□□□ 1.19
NXPH3-202ENST00000513748 EFCAB5A4FU69 1503 aa22.49■■□□□ 1.19
NXPH3-202ENST00000513748 PPARGC1BQ86YN6 1023 aaKnown RBP22.48■■□□□ 1.19
NXPH3-202ENST00000513748 KDM4FA0A1W2PPD8 638 aa22.47■■□□□ 1.19
NXPH3-202ENST00000513748 ABCC10Q5T3U5 1492 aa22.4■■□□□ 1.18
NXPH3-202ENST00000513748 FAM69CQ0P6D2 419 aa22.38■■□□□ 1.17
NXPH3-202ENST00000513748 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
NXPH3-202ENST00000513748 SAMD9Q5K651 1589 aa22.33■■□□□ 1.17
NXPH3-202ENST00000513748 IQGAP2Q13576 1575 aa22.33■■□□□ 1.16
NXPH3-202ENST00000513748 DIP2BQ9P265 1576 aa22.33■■□□□ 1.16
NXPH3-202ENST00000513748 MAP3K1Q13233 1512 aa22.33■■□□□ 1.16
NXPH3-202ENST00000513748 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
NXPH3-202ENST00000513748 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
NXPH3-202ENST00000513748 FHOD3Q2V2M9 1422 aa22.31■■□□□ 1.16
NXPH3-202ENST00000513748 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
NXPH3-202ENST00000513748 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
NXPH3-202ENST00000513748 KDM6BO15054 1643 aa22.27■■□□□ 1.16
NXPH3-202ENST00000513748 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
NXPH3-202ENST00000513748 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
NXPH3-202ENST00000513748 UGGT2Q9NYU1 1516 aa22.26■■□□□ 1.15
NXPH3-202ENST00000513748 CASKIN1Q8WXD9 1431 aa22.25■■□□□ 1.15
NXPH3-202ENST00000513748 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
NXPH3-202ENST00000513748 ADCY10Q96PN6 1610 aa22.24■■□□□ 1.15
NXPH3-202ENST00000513748 TIAM1Q13009 1591 aa22.2■■□□□ 1.14
NXPH3-202ENST00000513748 PCF11O94913 1555 aaKnown RBP22.19■■□□□ 1.14
NXPH3-202ENST00000513748 KANK4Q5T7N3 995 aaPredicted RBP22.19■■□□□ 1.14
NXPH3-202ENST00000513748 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
NXPH3-202ENST00000513748 HRCP23327 699 aa22.17■■□□□ 1.14
NXPH3-202ENST00000513748 TSPOAP1O95153 1857 aa22.16■■□□□ 1.14
NXPH3-202ENST00000513748 LRRC9Q6ZRR7 1453 aa22.12■■□□□ 1.13
NXPH3-202ENST00000513748 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
NXPH3-202ENST00000513748 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
NXPH3-202ENST00000513748 DISP1Q96F81 1524 aa22.09■■□□□ 1.13
NXPH3-202ENST00000513748 KIAA0556O60303 1618 aa22.08■■□□□ 1.13
NXPH3-202ENST00000513748 ADGRL1O94910 1474 aa22.06■■□□□ 1.12
NXPH3-202ENST00000513748 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
NXPH3-202ENST00000513748 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
NXPH3-202ENST00000513748 CCDC18Q5T9S5 1454 aa22.04■■□□□ 1.12
NXPH3-202ENST00000513748 PPRC1Q5VV67 1664 aaKnown RBP22.01■■□□□ 1.11
NXPH3-202ENST00000513748 HECW1Q76N89 1606 aa22.01■■□□□ 1.11
NXPH3-202ENST00000513748 HECW2Q9P2P5 1572 aa22■■□□□ 1.11
NXPH3-202ENST00000513748 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
NXPH3-202ENST00000513748 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
NXPH3-202ENST00000513748 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
NXPH3-202ENST00000513748 CCNB3Q8WWL7 1395 aa21.96■■□□□ 1.11
NXPH3-202ENST00000513748 EPRSP07814 1512 aaKnown RBP21.92■■□□□ 1.1
NXPH3-202ENST00000513748 GLI2P10070 1586 aa21.92■■□□□ 1.1
NXPH3-202ENST00000513748 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
NXPH3-202ENST00000513748 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
NXPH3-202ENST00000513748 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
NXPH3-202ENST00000513748 ASXL2Q76L83 1435 aa21.9■■□□□ 1.1
NXPH3-202ENST00000513748 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.1
NXPH3-202ENST00000513748 RAPGEF6Q8TEU7 1601 aa21.89■■□□□ 1.09
NXPH3-202ENST00000513748 PTPRGP23470 1445 aa21.89■■□□□ 1.09
NXPH3-202ENST00000513748 ABCC2Q92887 1545 aa21.89■■□□□ 1.09
NXPH3-202ENST00000513748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.85■■□□□ 1.09
NXPH3-202ENST00000513748 PLB1Q6P1J6 1458 aa21.85■■□□□ 1.09
NXPH3-202ENST00000513748 NUP153P49790 1475 aaKnown RBP21.84■■□□□ 1.09
NXPH3-202ENST00000513748 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
NXPH3-202ENST00000513748 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.08
NXPH3-202ENST00000513748 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
NXPH3-202ENST00000513748 NCOA2Q15596 1464 aa21.81■■□□□ 1.08
NXPH3-202ENST00000513748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
NXPH3-202ENST00000513748 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
NXPH3-202ENST00000513748 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
NXPH3-202ENST00000513748 MAP3K4Q9Y6R4 1608 aa21.78■■□□□ 1.08
NXPH3-202ENST00000513748 ABCA8O94911 1581 aa21.77■■□□□ 1.08
NXPH3-202ENST00000513748 UHRF1BP1LA0JNW5 1464 aa21.77■■□□□ 1.08
NXPH3-202ENST00000513748 MYOM3Q5VTT5 1437 aa21.76■■□□□ 1.07
NXPH3-202ENST00000513748 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
NXPH3-202ENST00000513748 FAM50AQ14320 339 aaKnown RBP21.73■■□□□ 1.07
NXPH3-202ENST00000513748 FBXO41Q8TF61 875 aa21.71■■□□□ 1.07
NXPH3-202ENST00000513748 UACAQ9BZF9 1416 aa21.71■■□□□ 1.07
NXPH3-202ENST00000513748 ARID3CA6NKF2 412 aa21.7■■□□□ 1.06
NXPH3-202ENST00000513748 TEX14Q8IWB6 1497 aa21.7■■□□□ 1.06
NXPH3-202ENST00000513748 KDM5BQ9UGL1 1544 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms