RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 FKBP8Q14318 412 aa16.13■□□□□ 0.17
CTNND2-215ENST00000513588 BCL11AQ9H165 835 aa16.12■□□□□ 0.17
CTNND2-215ENST00000513588 IGF1RP08069 1367 aa16.1■□□□□ 0.17
CTNND2-215ENST00000513588 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
CTNND2-215ENST00000513588 CUX1P39880 1505 aa16.1■□□□□ 0.17
CTNND2-215ENST00000513588 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
CTNND2-215ENST00000513588 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.17
CTNND2-215ENST00000513588 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.17
CTNND2-215ENST00000513588 CFTRP13569 1480 aa16.07■□□□□ 0.16
CTNND2-215ENST00000513588 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
CTNND2-215ENST00000513588 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
CTNND2-215ENST00000513588 POLR3GLQ9BT43 218 aa16.04■□□□□ 0.16
CTNND2-215ENST00000513588 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
CTNND2-215ENST00000513588 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
CTNND2-215ENST00000513588 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.16
CTNND2-215ENST00000513588 KCNH8Q96L42 1107 aa16.02■□□□□ 0.15
CTNND2-215ENST00000513588 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
CTNND2-215ENST00000513588 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
CTNND2-215ENST00000513588 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
CTNND2-215ENST00000513588 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
CTNND2-215ENST00000513588 PHLDB1Q86UU1 1377 aa15.98■□□□□ 0.15
CTNND2-215ENST00000513588 HNRNPUQ00839 825 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTNND2-215ENST00000513588 PPP1R15AO75807 674 aaPredicted RBP15.96■□□□□ 0.14
CTNND2-215ENST00000513588 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
CTNND2-215ENST00000513588 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
CTNND2-215ENST00000513588 FMN1Q68DA7 1419 aa15.91■□□□□ 0.14
CTNND2-215ENST00000513588 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
CTNND2-215ENST00000513588 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
CTNND2-215ENST00000513588 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
CTNND2-215ENST00000513588 CCER2I3L3R5 266 aa15.88■□□□□ 0.13
CTNND2-215ENST00000513588 RAD54L2Q9Y4B4 1467 aa15.88■□□□□ 0.13
CTNND2-215ENST00000513588 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTNND2-215ENST00000513588 CDK11AQ9UQ88 783 aaPredicted RBP15.87■□□□□ 0.13
CTNND2-215ENST00000513588 TSHZ2Q9NRE2 1034 aa15.85■□□□□ 0.13
CTNND2-215ENST00000513588 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
CTNND2-215ENST00000513588 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.13
CTNND2-215ENST00000513588 ZNF777Q9ULD5 760 aaPredicted RBP15.83■□□□□ 0.12
CTNND2-215ENST00000513588 FBLN2P98095 1184 aa15.82■□□□□ 0.12
CTNND2-215ENST00000513588 FGD6Q6ZV73 1430 aa15.79■□□□□ 0.12
CTNND2-215ENST00000513588 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
CTNND2-215ENST00000513588 MRS2Q9HD23 443 aa15.79■□□□□ 0.12
CTNND2-215ENST00000513588 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
CTNND2-215ENST00000513588 CCDC18Q5T9S5 1454 aa15.78■□□□□ 0.12
CTNND2-215ENST00000513588 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
CTNND2-215ENST00000513588 MAP3K1Q13233 1512 aa15.77■□□□□ 0.12
CTNND2-215ENST00000513588 WDR97A6NE52 1622 aa15.77■□□□□ 0.11
CTNND2-215ENST00000513588 FYCO1Q9BQS8 1478 aa15.76■□□□□ 0.11
CTNND2-215ENST00000513588 HSPA5P11021 654 aaKnown RBP15.76■□□□□ 0.11
CTNND2-215ENST00000513588 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
CTNND2-215ENST00000513588 FOXD1Q16676 465 aa15.74■□□□□ 0.11
CTNND2-215ENST00000513588 PCF11O94913 1555 aaKnown RBP15.73■□□□□ 0.11
CTNND2-215ENST00000513588 POLA1P09884 1462 aaPredicted RBP15.72■□□□□ 0.11
CTNND2-215ENST00000513588 MAPKBP1O60336 1514 aa15.72■□□□□ 0.11
CTNND2-215ENST00000513588 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
CTNND2-215ENST00000513588 UACAQ9BZF9 1416 aa15.71■□□□□ 0.1
CTNND2-215ENST00000513588 MPHOSPH9Q99550 1183 aa15.7■□□□□ 0.1
CTNND2-215ENST00000513588 NESP48681 1621 aa15.7■□□□□ 0.1
CTNND2-215ENST00000513588 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
CTNND2-215ENST00000513588 EFCAB5A4FU69 1503 aa15.7■□□□□ 0.1
CTNND2-215ENST00000513588 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
CTNND2-215ENST00000513588 GAPVD1Q14C86 1478 aa15.68■□□□□ 0.1
CTNND2-215ENST00000513588 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
CTNND2-215ENST00000513588 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
CTNND2-215ENST00000513588 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
CTNND2-215ENST00000513588 NCOA2Q15596 1464 aa15.67■□□□□ 0.1
CTNND2-215ENST00000513588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.66■□□□□ 0.1
CTNND2-215ENST00000513588 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
CTNND2-215ENST00000513588 CFDP1Q9UEE9 299 aaPredicted RBP15.66■□□□□ 0.1
CTNND2-215ENST00000513588 DNMBPQ6XZF7 1577 aa15.65■□□□□ 0.1
CTNND2-215ENST00000513588 HFM1A2PYH4 1435 aa15.64■□□□□ 0.09
CTNND2-215ENST00000513588 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
CTNND2-215ENST00000513588 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.09
CTNND2-215ENST00000513588 KDM2AQ9Y2K7 1162 aa15.6■□□□□ 0.09
CTNND2-215ENST00000513588 TMC1Q8TDI8 760 aa15.6■□□□□ 0.09
CTNND2-215ENST00000513588 NAIPQ13075 1403 aa15.58■□□□□ 0.08
CTNND2-215ENST00000513588 TSPY4P0CV99 314 aa15.58■□□□□ 0.08
CTNND2-215ENST00000513588 TSPY10P0CW01 314 aa15.58■□□□□ 0.08
CTNND2-215ENST00000513588 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
CTNND2-215ENST00000513588 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
CTNND2-215ENST00000513588 WASHC2AQ641Q2 1341 aa15.56■□□□□ 0.08
CTNND2-215ENST00000513588 CUL7Q14999 1698 aa15.54■□□□□ 0.08
CTNND2-215ENST00000513588 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
CTNND2-215ENST00000513588 B4GALNT3Q6L9W6 998 aa15.54■□□□□ 0.08
CTNND2-215ENST00000513588 CCDC136Q96JN2 1154 aa15.54■□□□□ 0.08
CTNND2-215ENST00000513588 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
CTNND2-215ENST00000513588 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
CTNND2-215ENST00000513588 PTPRKQ15262 1439 aa15.52■□□□□ 0.07
CTNND2-215ENST00000513588 EHBP1L1Q8N3D4 1523 aa15.52■□□□□ 0.07
CTNND2-215ENST00000513588 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
CTNND2-215ENST00000513588 PKD2Q13563 968 aa15.51■□□□□ 0.07
CTNND2-215ENST00000513588 CARD11Q9BXL7 1154 aa15.51■□□□□ 0.07
CTNND2-215ENST00000513588 ZNF644Q9H582 1327 aaPredicted RBP15.5■□□□□ 0.07
CTNND2-215ENST00000513588 SUPT6HQ7KZ85 1726 aaKnown RBP15.48■□□□□ 0.07
CTNND2-215ENST00000513588 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
CTNND2-215ENST00000513588 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
CTNND2-215ENST00000513588 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
CTNND2-215ENST00000513588 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
CTNND2-215ENST00000513588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
CTNND2-215ENST00000513588 PTPN23Q9H3S7 1636 aa15.47■□□□□ 0.07
CTNND2-215ENST00000513588 ANP32AP39687 249 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms