RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 WDR97A6NE52 1622 aa23.17■■□□□ 1.3
SDHA-215ENST00000512962 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
SDHA-215ENST00000512962 CUX1P39880 1505 aa23.13■■□□□ 1.29
SDHA-215ENST00000512962 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
SDHA-215ENST00000512962 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
SDHA-215ENST00000512962 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
SDHA-215ENST00000512962 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
SDHA-215ENST00000512962 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
SDHA-215ENST00000512962 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
SDHA-215ENST00000512962 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
SDHA-215ENST00000512962 MYCNP04198 464 aaPredicted RBP22.97■■□□□ 1.27
SDHA-215ENST00000512962 KIF13AQ9H1H9 1805 aa22.91■■□□□ 1.26
SDHA-215ENST00000512962 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
SDHA-215ENST00000512962 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
SDHA-215ENST00000512962 DCAF8L1A6NGE4 600 aa22.84■■□□□ 1.25
SDHA-215ENST00000512962 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
SDHA-215ENST00000512962 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
SDHA-215ENST00000512962 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
SDHA-215ENST00000512962 ATXN8OSP0DMR3 200 aa22.79■■□□□ 1.24
SDHA-215ENST00000512962 NUP160Q12769 1436 aa22.78■■□□□ 1.24
SDHA-215ENST00000512962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.64■■□□□ 1.21
SDHA-215ENST00000512962 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
SDHA-215ENST00000512962 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
SDHA-215ENST00000512962 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
SDHA-215ENST00000512962 DIP2BQ9P265 1576 aa22.57■■□□□ 1.2
SDHA-215ENST00000512962 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
SDHA-215ENST00000512962 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
SDHA-215ENST00000512962 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
SDHA-215ENST00000512962 ABCC10Q5T3U5 1492 aa22.54■■□□□ 1.2
SDHA-215ENST00000512962 ERICH3Q5RHP9 1530 aa22.53■■□□□ 1.2
SDHA-215ENST00000512962 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
SDHA-215ENST00000512962 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
SDHA-215ENST00000512962 KDM4FA0A1W2PPD8 638 aa22.49■■□□□ 1.19
SDHA-215ENST00000512962 KDM6BO15054 1643 aa22.47■■□□□ 1.19
SDHA-215ENST00000512962 FAM69CQ0P6D2 419 aa22.47■■□□□ 1.19
SDHA-215ENST00000512962 TSPOAP1O95153 1857 aa22.47■■□□□ 1.19
SDHA-215ENST00000512962 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
SDHA-215ENST00000512962 U3KPZ7 1027 aaPredicted RBP22.41■■□□□ 1.18
SDHA-215ENST00000512962 ILDR1Q86SU0 546 aaPredicted RBP22.38■■□□□ 1.17
SDHA-215ENST00000512962 ATF5Q9Y2D1 282 aaPredicted RBP22.35■■□□□ 1.17
SDHA-215ENST00000512962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
SDHA-215ENST00000512962 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
SDHA-215ENST00000512962 PPRC1Q5VV67 1664 aaKnown RBP22.31■■□□□ 1.16
SDHA-215ENST00000512962 SAMD1Q6SPF0 538 aaPredicted RBP22.31■■□□□ 1.16
SDHA-215ENST00000512962 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
SDHA-215ENST00000512962 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
SDHA-215ENST00000512962 KIAA0586Q9BVV6 1533 aa22.21■■□□□ 1.15
SDHA-215ENST00000512962 ADGRL1O94910 1474 aa22.2■■□□□ 1.14
SDHA-215ENST00000512962 CUL7Q14999 1698 aa22.16■■□□□ 1.14
SDHA-215ENST00000512962 COL17A1Q9UMD9 1497 aaPredicted RBP22.14■■□□□ 1.13
SDHA-215ENST00000512962 FKBP8Q14318 412 aa22.13■■□□□ 1.13
SDHA-215ENST00000512962 HECW2Q9P2P5 1572 aa22.12■■□□□ 1.13
SDHA-215ENST00000512962 GLI2P10070 1586 aa22.12■■□□□ 1.13
SDHA-215ENST00000512962 ABCC2Q92887 1545 aa22.11■■□□□ 1.13
SDHA-215ENST00000512962 ASXL2Q76L83 1435 aa22.1■■□□□ 1.13
SDHA-215ENST00000512962 IGF1RP08069 1367 aa22.1■■□□□ 1.13
SDHA-215ENST00000512962 TTBK1Q5TCY1 1321 aaPredicted RBP22.07■■□□□ 1.12
SDHA-215ENST00000512962 PTPRGP23470 1445 aa22.07■■□□□ 1.12
SDHA-215ENST00000512962 MAP3K4Q9Y6R4 1608 aa22.06■■□□□ 1.12
SDHA-215ENST00000512962 PLB1Q6P1J6 1458 aa22.01■■□□□ 1.11
SDHA-215ENST00000512962 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
SDHA-215ENST00000512962 UHRF1BP1LA0JNW5 1464 aa21.98■■□□□ 1.11
SDHA-215ENST00000512962 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
SDHA-215ENST00000512962 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
SDHA-215ENST00000512962 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
SDHA-215ENST00000512962 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
SDHA-215ENST00000512962 ZCCHC11Q5TAX3 1644 aaKnown RBP21.96■■□□□ 1.11
SDHA-215ENST00000512962 KDM5BQ9UGL1 1544 aa21.92■■□□□ 1.1
SDHA-215ENST00000512962 UACAQ9BZF9 1416 aa21.92■■□□□ 1.1
SDHA-215ENST00000512962 CARMIL2Q6F5E8 1435 aa21.91■■□□□ 1.1
SDHA-215ENST00000512962 CARMIL1Q5VZK9 1371 aa21.89■■□□□ 1.1
SDHA-215ENST00000512962 APLP2Q06481 763 aa21.88■■□□□ 1.09
SDHA-215ENST00000512962 ZNF219Q9P2Y4 722 aaPredicted RBP21.86■■□□□ 1.09
SDHA-215ENST00000512962 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
SDHA-215ENST00000512962 KIAA0556O60303 1618 aa21.84■■□□□ 1.09
SDHA-215ENST00000512962 KIF21BO75037 1637 aa21.83■■□□□ 1.08
SDHA-215ENST00000512962 UGGT2Q9NYU1 1516 aa21.8■■□□□ 1.08
SDHA-215ENST00000512962 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.08
SDHA-215ENST00000512962 CFAP43Q8NDM7 1665 aa21.75■■□□□ 1.07
SDHA-215ENST00000512962 MAGI3Q5TCQ9 1506 aa21.7■■□□□ 1.07
SDHA-215ENST00000512962 ABCA8O94911 1581 aa21.66■■□□□ 1.06
SDHA-215ENST00000512962 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
SDHA-215ENST00000512962 CTTNBP2Q8WZ74 1663 aa21.66■■□□□ 1.06
SDHA-215ENST00000512962 RAPGEF2Q9Y4G8 1499 aa21.65■■□□□ 1.06
SDHA-215ENST00000512962 RTN4Q9NQC3 1192 aaKnown RBP21.64■■□□□ 1.05
SDHA-215ENST00000512962 FBXO41Q8TF61 875 aa21.63■■□□□ 1.05
SDHA-215ENST00000512962 ADAMTSL3P82987 1691 aa21.63■■□□□ 1.05
SDHA-215ENST00000512962 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
SDHA-215ENST00000512962 RNF39Q9H2S5 420 aa21.59■■□□□ 1.05
SDHA-215ENST00000512962 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
SDHA-215ENST00000512962 PTPRMP28827 1452 aa21.57■■□□□ 1.04
SDHA-215ENST00000512962 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
SDHA-215ENST00000512962 SPINK5Q9NQ38 1064 aaPredicted RBP21.54■■□□□ 1.04
SDHA-215ENST00000512962 MADDQ8WXG6 1647 aa21.52■■□□□ 1.04
SDHA-215ENST00000512962 FRMPD1Q5SYB0 1578 aa21.52■■□□□ 1.04
SDHA-215ENST00000512962 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.03
SDHA-215ENST00000512962 LMTK3Q96Q04 1460 aa21.49■■□□□ 1.03
SDHA-215ENST00000512962 PCF11O94913 1555 aaKnown RBP21.48■■□□□ 1.03
SDHA-215ENST00000512962 ABCA9Q8IUA7 1624 aa21.48■■□□□ 1.03
SDHA-215ENST00000512962 GOLGA3Q08378 1498 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms