RNA–Protein interactions for RNA: ENST00000512557.5

SLC41A3-216, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2

Gene SLC41A3, Length 3,828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-216ENST00000512557 PRXQ9BXM0 1461 aa13.13□□□□□ -0.31
SLC41A3-216ENST00000512557 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
SLC41A3-216ENST00000512557 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
SLC41A3-216ENST00000512557 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
SLC41A3-216ENST00000512557 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
SLC41A3-216ENST00000512557 ARAP1Q96P48 1450 aa13.07□□□□□ -0.32
SLC41A3-216ENST00000512557 FHOD3Q2V2M9 1422 aa13.07□□□□□ -0.32
SLC41A3-216ENST00000512557 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
SLC41A3-216ENST00000512557 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
SLC41A3-216ENST00000512557 PRDM2Q13029 1718 aa13.02□□□□□ -0.32
SLC41A3-216ENST00000512557 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
SLC41A3-216ENST00000512557 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
SLC41A3-216ENST00000512557 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
SLC41A3-216ENST00000512557 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
SLC41A3-216ENST00000512557 GRIN2BQ13224 1484 aa13□□□□□ -0.33
SLC41A3-216ENST00000512557 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
SLC41A3-216ENST00000512557 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
SLC41A3-216ENST00000512557 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
SLC41A3-216ENST00000512557 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
SLC41A3-216ENST00000512557 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.33
SLC41A3-216ENST00000512557 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
SLC41A3-216ENST00000512557 MIER1Q8N108 512 aa12.94□□□□□ -0.34
SLC41A3-216ENST00000512557 WDR62O43379 1518 aa12.9□□□□□ -0.34
SLC41A3-216ENST00000512557 CHIC2Q9UKJ5 165 aa12.9□□□□□ -0.34
SLC41A3-216ENST00000512557 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
SLC41A3-216ENST00000512557 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
SLC41A3-216ENST00000512557 SIN3AQ96ST3 1273 aa12.86□□□□□ -0.35
SLC41A3-216ENST00000512557 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
SLC41A3-216ENST00000512557 TARBP1Q13395 1621 aaKnown RBP12.85□□□□□ -0.35
SLC41A3-216ENST00000512557 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
SLC41A3-216ENST00000512557 PHLDB1Q86UU1 1377 aa12.85□□□□□ -0.35
SLC41A3-216ENST00000512557 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
SLC41A3-216ENST00000512557 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
SLC41A3-216ENST00000512557 RAB3GAP2Q9H2M9 1393 aa12.83□□□□□ -0.36
SLC41A3-216ENST00000512557 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
SLC41A3-216ENST00000512557 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
SLC41A3-216ENST00000512557 CUL7Q14999 1698 aa12.82□□□□□ -0.36
SLC41A3-216ENST00000512557 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
SLC41A3-216ENST00000512557 GRIN2AQ12879 1464 aa12.82□□□□□ -0.36
SLC41A3-216ENST00000512557 ABCA5Q8WWZ7 1642 aa12.81□□□□□ -0.36
SLC41A3-216ENST00000512557 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
SLC41A3-216ENST00000512557 PLEKHD1A6NEE1 506 aa12.81□□□□□ -0.36
SLC41A3-216ENST00000512557 CARMIL2Q6F5E8 1435 aa12.81□□□□□ -0.36
SLC41A3-216ENST00000512557 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
SLC41A3-216ENST00000512557 LRRC9Q6ZRR7 1453 aa12.79□□□□□ -0.36
SLC41A3-216ENST00000512557 SYNJ2O15056 1496 aa12.79□□□□□ -0.36
SLC41A3-216ENST00000512557 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
SLC41A3-216ENST00000512557 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
SLC41A3-216ENST00000512557 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
SLC41A3-216ENST00000512557 PRG4Q92954 1404 aaPredicted RBP12.76□□□□□ -0.37
SLC41A3-216ENST00000512557 SETD5Q9C0A6 1442 aa12.76□□□□□ -0.37
SLC41A3-216ENST00000512557 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
SLC41A3-216ENST00000512557 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
SLC41A3-216ENST00000512557 CLSPNQ9HAW4 1339 aa12.75□□□□□ -0.37
SLC41A3-216ENST00000512557 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
SLC41A3-216ENST00000512557 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
SLC41A3-216ENST00000512557 PTPRGP23470 1445 aa12.75□□□□□ -0.37
SLC41A3-216ENST00000512557 PBRM1Q86U86 1689 aa12.74□□□□□ -0.37
SLC41A3-216ENST00000512557 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLC41A3-216ENST00000512557 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
SLC41A3-216ENST00000512557 PCF11O94913 1555 aaKnown RBP12.72□□□□□ -0.37
SLC41A3-216ENST00000512557 CASKIN1Q8WXD9 1431 aa12.71□□□□□ -0.37
SLC41A3-216ENST00000512557 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.38
SLC41A3-216ENST00000512557 WDR97A6NE52 1622 aa12.71□□□□□ -0.38
SLC41A3-216ENST00000512557 PLB1Q6P1J6 1458 aa12.69□□□□□ -0.38
SLC41A3-216ENST00000512557 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
SLC41A3-216ENST00000512557 CDK13Q14004 1512 aaKnown RBP12.69□□□□□ -0.38
SLC41A3-216ENST00000512557 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
SLC41A3-216ENST00000512557 ZNF644Q9H582 1327 aaPredicted RBP12.68□□□□□ -0.38
SLC41A3-216ENST00000512557 FYCO1Q9BQS8 1478 aa12.66□□□□□ -0.38
SLC41A3-216ENST00000512557 TONSLQ96HA7 1378 aa12.66□□□□□ -0.38
SLC41A3-216ENST00000512557 CTTNBP2Q8WZ74 1663 aa12.65□□□□□ -0.38
SLC41A3-216ENST00000512557 FGD6Q6ZV73 1430 aa12.65□□□□□ -0.39
SLC41A3-216ENST00000512557 FOXD1Q16676 465 aa12.64□□□□□ -0.39
SLC41A3-216ENST00000512557 CNGB1Q14028 1251 aaPredicted RBP12.63□□□□□ -0.39
SLC41A3-216ENST00000512557 CEP170Q5SW79 1584 aa12.63□□□□□ -0.39
SLC41A3-216ENST00000512557 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
SLC41A3-216ENST00000512557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLC41A3-216ENST00000512557 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
SLC41A3-216ENST00000512557 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
SLC41A3-216ENST00000512557 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
SLC41A3-216ENST00000512557 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
SLC41A3-216ENST00000512557 ZNF326Q5BKZ1 582 aaKnown RBP12.6□□□□□ -0.39
SLC41A3-216ENST00000512557 EPRSP07814 1512 aaKnown RBP12.59□□□□□ -0.39
SLC41A3-216ENST00000512557 DISP1Q96F81 1524 aa12.59□□□□□ -0.39
SLC41A3-216ENST00000512557 NUP160Q12769 1436 aa12.59□□□□□ -0.39
SLC41A3-216ENST00000512557 POLR3GLQ9BT43 218 aa12.59□□□□□ -0.39
SLC41A3-216ENST00000512557 MYOM3Q5VTT5 1437 aa12.58□□□□□ -0.4
SLC41A3-216ENST00000512557 CCDC18Q5T9S5 1454 aa12.58□□□□□ -0.4
SLC41A3-216ENST00000512557 PPP1R15AO75807 674 aaPredicted RBP12.57□□□□□ -0.4
SLC41A3-216ENST00000512557 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
SLC41A3-216ENST00000512557 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
SLC41A3-216ENST00000512557 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
SLC41A3-216ENST00000512557 KIAA0556O60303 1618 aa12.54□□□□□ -0.4
SLC41A3-216ENST00000512557 ANP32CO43423 234 aa12.54□□□□□ -0.4
SLC41A3-216ENST00000512557 BCANQ96GW7 911 aa12.53□□□□□ -0.4
SLC41A3-216ENST00000512557 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
SLC41A3-216ENST00000512557 NUP153P49790 1475 aaKnown RBP12.52□□□□□ -0.4
SLC41A3-216ENST00000512557 CHD1O14646 1710 aa12.52□□□□□ -0.41
SLC41A3-216ENST00000512557 MPHOSPH9Q99550 1183 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms