RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
MSH3-203ENST00000512531 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
MSH3-203ENST00000512531 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
MSH3-203ENST00000512531 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
MSH3-203ENST00000512531 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
MSH3-203ENST00000512531 CUX1P39880 1505 aa15.88■□□□□ 0.13
MSH3-203ENST00000512531 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
MSH3-203ENST00000512531 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
MSH3-203ENST00000512531 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
MSH3-203ENST00000512531 GAPVD1Q14C86 1478 aa15.79■□□□□ 0.12
MSH3-203ENST00000512531 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
MSH3-203ENST00000512531 ABCA5Q8WWZ7 1642 aa15.74■□□□□ 0.11
MSH3-203ENST00000512531 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
MSH3-203ENST00000512531 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
MSH3-203ENST00000512531 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
MSH3-203ENST00000512531 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
MSH3-203ENST00000512531 SLC24A1O60721 1099 aa15.68■□□□□ 0.1
MSH3-203ENST00000512531 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
MSH3-203ENST00000512531 NUP160Q12769 1436 aa15.66■□□□□ 0.1
MSH3-203ENST00000512531 FKBP8Q14318 412 aa15.64■□□□□ 0.09
MSH3-203ENST00000512531 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
MSH3-203ENST00000512531 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
MSH3-203ENST00000512531 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
MSH3-203ENST00000512531 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
MSH3-203ENST00000512531 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
MSH3-203ENST00000512531 ERICH3Q5RHP9 1530 aa15.59■□□□□ 0.09
MSH3-203ENST00000512531 SHROOM2Q13796 1616 aa15.59■□□□□ 0.09
MSH3-203ENST00000512531 CEP170Q5SW79 1584 aa15.58■□□□□ 0.09
MSH3-203ENST00000512531 ERCC6L2Q5T890 1561 aa15.55■□□□□ 0.08
MSH3-203ENST00000512531 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
MSH3-203ENST00000512531 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
MSH3-203ENST00000512531 PRG4Q92954 1404 aaPredicted RBP15.47■□□□□ 0.07
MSH3-203ENST00000512531 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
MSH3-203ENST00000512531 KIF13AQ9H1H9 1805 aa15.4■□□□□ 0.06
MSH3-203ENST00000512531 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
MSH3-203ENST00000512531 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
MSH3-203ENST00000512531 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
MSH3-203ENST00000512531 KIAA0586Q9BVV6 1533 aa15.37■□□□□ 0.05
MSH3-203ENST00000512531 IGF1RP08069 1367 aa15.34■□□□□ 0.05
MSH3-203ENST00000512531 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
MSH3-203ENST00000512531 FAM69CQ0P6D2 419 aa15.32■□□□□ 0.04
MSH3-203ENST00000512531 CUL7Q14999 1698 aa15.31■□□□□ 0.04
MSH3-203ENST00000512531 ADCY10Q96PN6 1610 aa15.29■□□□□ 0.04
MSH3-203ENST00000512531 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
MSH3-203ENST00000512531 PTPRGP23470 1445 aa15.23■□□□□ 0.03
MSH3-203ENST00000512531 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
MSH3-203ENST00000512531 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
MSH3-203ENST00000512531 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
MSH3-203ENST00000512531 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.02
MSH3-203ENST00000512531 KDM6BO15054 1643 aa15.19■□□□□ 0.02
MSH3-203ENST00000512531 ABCC2Q92887 1545 aa15.18■□□□□ 0.02
MSH3-203ENST00000512531 UHRF1BP1LA0JNW5 1464 aa15.17■□□□□ 0.02
MSH3-203ENST00000512531 PLB1Q6P1J6 1458 aa15.17■□□□□ 0.02
MSH3-203ENST00000512531 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
MSH3-203ENST00000512531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
MSH3-203ENST00000512531 GLI2P10070 1586 aa15.15■□□□□ 0.02
MSH3-203ENST00000512531 IQGAP2Q13576 1575 aa15.14■□□□□ 0.01
MSH3-203ENST00000512531 KDM4FA0A1W2PPD8 638 aa15.12■□□□□ 0.01
MSH3-203ENST00000512531 ASXL2Q76L83 1435 aa15.11■□□□□ 0.01
MSH3-203ENST00000512531 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
MSH3-203ENST00000512531 TSPOAP1O95153 1857 aa15.1■□□□□ 0.01
MSH3-203ENST00000512531 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
MSH3-203ENST00000512531 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0.01
MSH3-203ENST00000512531 KDM5BQ9UGL1 1544 aa15.08■□□□□ 0.01
MSH3-203ENST00000512531 RAPGEF2Q9Y4G8 1499 aa15.07■□□□□ 0
MSH3-203ENST00000512531 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
MSH3-203ENST00000512531 PPRC1Q5VV67 1664 aaKnown RBP15.05■□□□□ -0
MSH3-203ENST00000512531 EPRSP07814 1512 aaKnown RBP15.04■□□□□ -0
MSH3-203ENST00000512531 TEX14Q8IWB6 1497 aa15.03■□□□□ -0
MSH3-203ENST00000512531 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
MSH3-203ENST00000512531 MAP3K4Q9Y6R4 1608 aa15.01□□□□□ -0.01
MSH3-203ENST00000512531 KIAA0556O60303 1618 aa15□□□□□ -0.01
MSH3-203ENST00000512531 EEA1Q15075 1411 aa14.99□□□□□ -0.01
MSH3-203ENST00000512531 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
MSH3-203ENST00000512531 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
MSH3-203ENST00000512531 ZCCHC11Q5TAX3 1644 aaKnown RBP14.97□□□□□ -0.01
MSH3-203ENST00000512531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
MSH3-203ENST00000512531 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
MSH3-203ENST00000512531 GOLGA3Q08378 1498 aa14.96□□□□□ -0.01
MSH3-203ENST00000512531 WDR7Q9Y4E6 1490 aa14.95□□□□□ -0.02
MSH3-203ENST00000512531 ADGRL1O94910 1474 aa14.95□□□□□ -0.02
MSH3-203ENST00000512531 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
MSH3-203ENST00000512531 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
MSH3-203ENST00000512531 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
MSH3-203ENST00000512531 CTTNBP2Q8WZ74 1663 aa14.9□□□□□ -0.02
MSH3-203ENST00000512531 ABCA8O94911 1581 aa14.9□□□□□ -0.02
MSH3-203ENST00000512531 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
MSH3-203ENST00000512531 CFAP43Q8NDM7 1665 aa14.88□□□□□ -0.03
MSH3-203ENST00000512531 CD109Q6YHK3 1445 aa14.88□□□□□ -0.03
MSH3-203ENST00000512531 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
MSH3-203ENST00000512531 PHLDB1Q86UU1 1377 aa14.84□□□□□ -0.03
MSH3-203ENST00000512531 ARAP3Q8WWN8 1544 aa14.82□□□□□ -0.04
MSH3-203ENST00000512531 TRIM26Q12899 539 aaPredicted RBP14.81□□□□□ -0.04
MSH3-203ENST00000512531 ILDR1Q86SU0 546 aaPredicted RBP14.81□□□□□ -0.04
MSH3-203ENST00000512531 KCNH8Q96L42 1107 aa14.8□□□□□ -0.04
MSH3-203ENST00000512531 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
MSH3-203ENST00000512531 PCGF6Q9BYE7 350 aa14.77□□□□□ -0.05
MSH3-203ENST00000512531 ATP10BO94823 1461 aa14.76□□□□□ -0.05
MSH3-203ENST00000512531 PROM2Q8N271 834 aa14.76□□□□□ -0.05
MSH3-203ENST00000512531 ABCA9Q8IUA7 1624 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms