RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
PDGFRA-210ENST00000512522 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
PDGFRA-210ENST00000512522 MSH5O43196 834 aa16.13■□□□□ 0.17
PDGFRA-210ENST00000512522 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
PDGFRA-210ENST00000512522 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
PDGFRA-210ENST00000512522 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
PDGFRA-210ENST00000512522 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
PDGFRA-210ENST00000512522 NUP160Q12769 1436 aa16.03■□□□□ 0.16
PDGFRA-210ENST00000512522 CTTNBP2Q8WZ74 1663 aa16.03■□□□□ 0.16
PDGFRA-210ENST00000512522 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
PDGFRA-210ENST00000512522 CLIP1P30622 1438 aa16■□□□□ 0.15
PDGFRA-210ENST00000512522 CEP170Q5SW79 1584 aa16■□□□□ 0.15
PDGFRA-210ENST00000512522 FBLN2P98095 1184 aa15.99■□□□□ 0.15
PDGFRA-210ENST00000512522 CHD1O14646 1710 aa15.99■□□□□ 0.15
PDGFRA-210ENST00000512522 IQGAP2Q13576 1575 aa15.96■□□□□ 0.14
PDGFRA-210ENST00000512522 ARHGAP35Q9NRY4 1499 aa15.95■□□□□ 0.14
PDGFRA-210ENST00000512522 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
PDGFRA-210ENST00000512522 EFCAB5A4FU69 1503 aa15.91■□□□□ 0.14
PDGFRA-210ENST00000512522 RANGAP1P46060 587 aaPredicted RBP15.91■□□□□ 0.14
PDGFRA-210ENST00000512522 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
PDGFRA-210ENST00000512522 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
PDGFRA-210ENST00000512522 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
PDGFRA-210ENST00000512522 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
PDGFRA-210ENST00000512522 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
PDGFRA-210ENST00000512522 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
PDGFRA-210ENST00000512522 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
PDGFRA-210ENST00000512522 SHROOM2Q13796 1616 aa15.83■□□□□ 0.12
PDGFRA-210ENST00000512522 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
PDGFRA-210ENST00000512522 KIAA0556O60303 1618 aa15.8■□□□□ 0.12
PDGFRA-210ENST00000512522 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
PDGFRA-210ENST00000512522 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
PDGFRA-210ENST00000512522 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.11
PDGFRA-210ENST00000512522 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
PDGFRA-210ENST00000512522 PRG4Q92954 1404 aaPredicted RBP15.76■□□□□ 0.11
PDGFRA-210ENST00000512522 KCNA4P22459 653 aa15.75■□□□□ 0.11
PDGFRA-210ENST00000512522 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
PDGFRA-210ENST00000512522 ERCC6L2Q5T890 1561 aa15.7■□□□□ 0.1
PDGFRA-210ENST00000512522 FYCO1Q9BQS8 1478 aa15.69■□□□□ 0.1
PDGFRA-210ENST00000512522 PCF11O94913 1555 aaKnown RBP15.69■□□□□ 0.1
PDGFRA-210ENST00000512522 MAP3K1Q13233 1512 aa15.67■□□□□ 0.1
PDGFRA-210ENST00000512522 PTPRGP23470 1445 aa15.65■□□□□ 0.1
PDGFRA-210ENST00000512522 ABCA8O94911 1581 aa15.62■□□□□ 0.09
PDGFRA-210ENST00000512522 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
PDGFRA-210ENST00000512522 RAPGEF6Q8TEU7 1601 aa15.61■□□□□ 0.09
PDGFRA-210ENST00000512522 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
PDGFRA-210ENST00000512522 TIAM1Q13009 1591 aa15.6■□□□□ 0.09
PDGFRA-210ENST00000512522 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
PDGFRA-210ENST00000512522 HECW1Q76N89 1606 aa15.59■□□□□ 0.09
PDGFRA-210ENST00000512522 APLP2Q06481 763 aa15.59■□□□□ 0.09
PDGFRA-210ENST00000512522 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.08
PDGFRA-210ENST00000512522 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
PDGFRA-210ENST00000512522 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
PDGFRA-210ENST00000512522 TTBK1Q5TCY1 1321 aaPredicted RBP15.57■□□□□ 0.08
PDGFRA-210ENST00000512522 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
PDGFRA-210ENST00000512522 CCDC18Q5T9S5 1454 aa15.56■□□□□ 0.08
PDGFRA-210ENST00000512522 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
PDGFRA-210ENST00000512522 ATP1B4Q9UN42 357 aaPredicted RBP15.55■□□□□ 0.08
PDGFRA-210ENST00000512522 UHRF1BP1LA0JNW5 1464 aa15.54■□□□□ 0.08
PDGFRA-210ENST00000512522 LRRC9Q6ZRR7 1453 aa15.54■□□□□ 0.08
PDGFRA-210ENST00000512522 PPARGC1BQ86YN6 1023 aaKnown RBP15.54■□□□□ 0.08
PDGFRA-210ENST00000512522 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
PDGFRA-210ENST00000512522 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
PDGFRA-210ENST00000512522 ATP10BO94823 1461 aa15.52■□□□□ 0.07
PDGFRA-210ENST00000512522 CDK13Q14004 1512 aaKnown RBP15.51■□□□□ 0.07
PDGFRA-210ENST00000512522 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
PDGFRA-210ENST00000512522 MAGI3Q5TCQ9 1506 aa15.49■□□□□ 0.07
PDGFRA-210ENST00000512522 RIMBP3CA6NJZ7 1639 aa15.47■□□□□ 0.07
PDGFRA-210ENST00000512522 RIMBP3BA6NNM3 1639 aa15.47■□□□□ 0.07
PDGFRA-210ENST00000512522 RIMBP3Q9UFD9 1639 aa15.47■□□□□ 0.07
PDGFRA-210ENST00000512522 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
PDGFRA-210ENST00000512522 KDM5BQ9UGL1 1544 aa15.46■□□□□ 0.07
PDGFRA-210ENST00000512522 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.06
PDGFRA-210ENST00000512522 ARID3CA6NKF2 412 aa15.45■□□□□ 0.06
PDGFRA-210ENST00000512522 EHBP1L1Q8N3D4 1523 aa15.44■□□□□ 0.06
PDGFRA-210ENST00000512522 MTUS2Q5JR59 1369 aa15.44■□□□□ 0.06
PDGFRA-210ENST00000512522 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
PDGFRA-210ENST00000512522 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
PDGFRA-210ENST00000512522 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
PDGFRA-210ENST00000512522 ZCCHC11Q5TAX3 1644 aaKnown RBP15.39■□□□□ 0.05
PDGFRA-210ENST00000512522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
PDGFRA-210ENST00000512522 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
PDGFRA-210ENST00000512522 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
PDGFRA-210ENST00000512522 PLEKHD1A6NEE1 506 aa15.38■□□□□ 0.05
PDGFRA-210ENST00000512522 NCOA2Q15596 1464 aa15.38■□□□□ 0.05
PDGFRA-210ENST00000512522 PHLDB1Q86UU1 1377 aa15.37■□□□□ 0.05
PDGFRA-210ENST00000512522 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
PDGFRA-210ENST00000512522 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
PDGFRA-210ENST00000512522 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
PDGFRA-210ENST00000512522 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
PDGFRA-210ENST00000512522 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
PDGFRA-210ENST00000512522 KIF14Q15058 1648 aa15.32■□□□□ 0.04
PDGFRA-210ENST00000512522 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
PDGFRA-210ENST00000512522 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
PDGFRA-210ENST00000512522 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
PDGFRA-210ENST00000512522 CCNB3Q8WWL7 1395 aa15.29■□□□□ 0.04
PDGFRA-210ENST00000512522 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDGFRA-210ENST00000512522 WDR7Q9Y4E6 1490 aa15.28■□□□□ 0.04
PDGFRA-210ENST00000512522 FGD6Q6ZV73 1430 aa15.28■□□□□ 0.04
PDGFRA-210ENST00000512522 ASXL2Q76L83 1435 aa15.28■□□□□ 0.04
PDGFRA-210ENST00000512522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms