RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
TRIO-219ENST00000512303 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
TRIO-219ENST00000512303 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
TRIO-219ENST00000512303 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
TRIO-219ENST00000512303 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
TRIO-219ENST00000512303 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
TRIO-219ENST00000512303 RSF1Q96T23 1441 aaPredicted RBP12.7□□□□□ -0.38
TRIO-219ENST00000512303 ABCC8Q09428 1581 aa12.67□□□□□ -0.38
TRIO-219ENST00000512303 PROM2Q8N271 834 aa12.63□□□□□ -0.39
TRIO-219ENST00000512303 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
TRIO-219ENST00000512303 WIZO95785 1651 aa12.62□□□□□ -0.39
TRIO-219ENST00000512303 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
TRIO-219ENST00000512303 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
TRIO-219ENST00000512303 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
TRIO-219ENST00000512303 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
TRIO-219ENST00000512303 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
TRIO-219ENST00000512303 EIF4G3O43432 1585 aaKnown RBP12.54□□□□□ -0.4
TRIO-219ENST00000512303 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
TRIO-219ENST00000512303 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRIO-219ENST00000512303 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
TRIO-219ENST00000512303 DNMBPQ6XZF7 1577 aa12.48□□□□□ -0.41
TRIO-219ENST00000512303 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
TRIO-219ENST00000512303 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
TRIO-219ENST00000512303 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
TRIO-219ENST00000512303 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
TRIO-219ENST00000512303 CHD1O14646 1710 aa12.42□□□□□ -0.42
TRIO-219ENST00000512303 MAGI1Q96QZ7 1491 aaPredicted RBP12.42□□□□□ -0.42
TRIO-219ENST00000512303 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
TRIO-219ENST00000512303 TARBP1Q13395 1621 aaKnown RBP12.41□□□□□ -0.42
TRIO-219ENST00000512303 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
TRIO-219ENST00000512303 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
TRIO-219ENST00000512303 SOGA1O94964 1423 aa12.39□□□□□ -0.43
TRIO-219ENST00000512303 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
TRIO-219ENST00000512303 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
TRIO-219ENST00000512303 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
TRIO-219ENST00000512303 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
TRIO-219ENST00000512303 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
TRIO-219ENST00000512303 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
TRIO-219ENST00000512303 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
TRIO-219ENST00000512303 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
TRIO-219ENST00000512303 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
TRIO-219ENST00000512303 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
TRIO-219ENST00000512303 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
TRIO-219ENST00000512303 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
TRIO-219ENST00000512303 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
TRIO-219ENST00000512303 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRIO-219ENST00000512303 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
TRIO-219ENST00000512303 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
TRIO-219ENST00000512303 MIER1Q8N108 512 aa12.18□□□□□ -0.46
TRIO-219ENST00000512303 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
TRIO-219ENST00000512303 GRIN2AQ12879 1464 aa12.15□□□□□ -0.46
TRIO-219ENST00000512303 NUP160Q12769 1436 aa12.15□□□□□ -0.46
TRIO-219ENST00000512303 FAM69CQ0P6D2 419 aa12.15□□□□□ -0.46
TRIO-219ENST00000512303 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
TRIO-219ENST00000512303 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
TRIO-219ENST00000512303 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
TRIO-219ENST00000512303 CUX1P39880 1505 aa12.12□□□□□ -0.47
TRIO-219ENST00000512303 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
TRIO-219ENST00000512303 CEP170Q5SW79 1584 aa12.12□□□□□ -0.47
TRIO-219ENST00000512303 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
TRIO-219ENST00000512303 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
TRIO-219ENST00000512303 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
TRIO-219ENST00000512303 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
TRIO-219ENST00000512303 WRNQ14191 1432 aaPredicted RBP eCLIP12.08□□□□□ -0.48
TRIO-219ENST00000512303 MAPKBP1O60336 1514 aa12.07□□□□□ -0.48
TRIO-219ENST00000512303 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
TRIO-219ENST00000512303 JPH4Q96JJ6 628 aa12.07□□□□□ -0.48
TRIO-219ENST00000512303 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
TRIO-219ENST00000512303 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
TRIO-219ENST00000512303 ABCA5Q8WWZ7 1642 aa12.06□□□□□ -0.48
TRIO-219ENST00000512303 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
TRIO-219ENST00000512303 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
TRIO-219ENST00000512303 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
TRIO-219ENST00000512303 KDM6BO15054 1643 aa12.03□□□□□ -0.48
TRIO-219ENST00000512303 ADAMTS12P58397 1594 aa12.02□□□□□ -0.49
TRIO-219ENST00000512303 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
TRIO-219ENST00000512303 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
TRIO-219ENST00000512303 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
TRIO-219ENST00000512303 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
TRIO-219ENST00000512303 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
TRIO-219ENST00000512303 DIP2BQ9P265 1576 aa11.99□□□□□ -0.49
TRIO-219ENST00000512303 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.491e-7■■■■■ 37.2
TRIO-219ENST00000512303 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
TRIO-219ENST00000512303 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
TRIO-219ENST00000512303 ADGRL1O94910 1474 aa11.91□□□□□ -0.5
TRIO-219ENST00000512303 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
TRIO-219ENST00000512303 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
TRIO-219ENST00000512303 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
TRIO-219ENST00000512303 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
TRIO-219ENST00000512303 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
TRIO-219ENST00000512303 ADCY10Q96PN6 1610 aa11.87□□□□□ -0.51
TRIO-219ENST00000512303 PTPRGP23470 1445 aa11.86□□□□□ -0.51
TRIO-219ENST00000512303 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
TRIO-219ENST00000512303 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
TRIO-219ENST00000512303 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
TRIO-219ENST00000512303 HECW2Q9P2P5 1572 aa11.85□□□□□ -0.51
TRIO-219ENST00000512303 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
TRIO-219ENST00000512303 FARP1Q9Y4F1 1045 aaPredicted RBP11.85□□□□□ -0.51
TRIO-219ENST00000512303 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
TRIO-219ENST00000512303 GLI2P10070 1586 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms