RNA–Protein interactions for RNA: ENST00000512215.5

PPP3CA-207, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-207ENST00000512215 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
PPP3CA-207ENST00000512215 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
PPP3CA-207ENST00000512215 DDX10Q13206 875 aaKnown RBP22.12■■□□□ 1.13
PPP3CA-207ENST00000512215 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
PPP3CA-207ENST00000512215 CDK11AQ9UQ88 783 aaPredicted RBP22.08■■□□□ 1.13
PPP3CA-207ENST00000512215 IGF1RP08069 1367 aa22.07■■□□□ 1.12
PPP3CA-207ENST00000512215 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
PPP3CA-207ENST00000512215 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
PPP3CA-207ENST00000512215 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
PPP3CA-207ENST00000512215 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
PPP3CA-207ENST00000512215 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
PPP3CA-207ENST00000512215 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
PPP3CA-207ENST00000512215 BCANQ96GW7 911 aa21.99■■□□□ 1.11
PPP3CA-207ENST00000512215 CFTRP13569 1480 aa21.98■■□□□ 1.11
PPP3CA-207ENST00000512215 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
PPP3CA-207ENST00000512215 NEFLP07196 543 aa21.98■■□□□ 1.11
PPP3CA-207ENST00000512215 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
PPP3CA-207ENST00000512215 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
PPP3CA-207ENST00000512215 CUX1P39880 1505 aa21.95■■□□□ 1.1
PPP3CA-207ENST00000512215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.1
PPP3CA-207ENST00000512215 ANP32CO43423 234 aa21.9■■□□□ 1.1
PPP3CA-207ENST00000512215 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
PPP3CA-207ENST00000512215 KIF21BO75037 1637 aa21.86■■□□□ 1.09
PPP3CA-207ENST00000512215 FOXD1Q16676 465 aa21.86■■□□□ 1.09
PPP3CA-207ENST00000512215 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
PPP3CA-207ENST00000512215 CFDP1Q9UEE9 299 aaPredicted RBP21.84■■□□□ 1.09
PPP3CA-207ENST00000512215 KDM2AQ9Y2K7 1162 aa21.84■■□□□ 1.09
PPP3CA-207ENST00000512215 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.08
PPP3CA-207ENST00000512215 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
PPP3CA-207ENST00000512215 RAB3GAP2Q9H2M9 1393 aa21.82■■□□□ 1.08
PPP3CA-207ENST00000512215 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
PPP3CA-207ENST00000512215 AQRO60306 1485 aaKnown RBP eCLIP21.8■■□□□ 1.08
PPP3CA-207ENST00000512215 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
PPP3CA-207ENST00000512215 SENP3-EIF4A1A0A087X0R7 540 aa21.78■■□□□ 1.08
PPP3CA-207ENST00000512215 TSPY4P0CV99 314 aa21.77■■□□□ 1.08
PPP3CA-207ENST00000512215 TSPY10P0CW01 314 aa21.77■■□□□ 1.08
PPP3CA-207ENST00000512215 RTN4Q9NQC3 1192 aaKnown RBP21.77■■□□□ 1.08
PPP3CA-207ENST00000512215 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
PPP3CA-207ENST00000512215 PRXQ9BXM0 1461 aa21.76■■□□□ 1.07
PPP3CA-207ENST00000512215 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
PPP3CA-207ENST00000512215 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
PPP3CA-207ENST00000512215 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
PPP3CA-207ENST00000512215 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
PPP3CA-207ENST00000512215 SETD5Q9C0A6 1442 aa21.7■■□□□ 1.06
PPP3CA-207ENST00000512215 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
PPP3CA-207ENST00000512215 RGL3Q3MIN7 710 aa21.68■■□□□ 1.06
PPP3CA-207ENST00000512215 DHX57Q6P158 1386 aaKnown RBP21.67■■□□□ 1.06
PPP3CA-207ENST00000512215 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
PPP3CA-207ENST00000512215 FMN1Q68DA7 1419 aa21.66■■□□□ 1.06
PPP3CA-207ENST00000512215 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
PPP3CA-207ENST00000512215 JPH4Q96JJ6 628 aa21.63■■□□□ 1.05
PPP3CA-207ENST00000512215 FAM9BQ8IZU0 186 aa21.62■■□□□ 1.05
PPP3CA-207ENST00000512215 CHGAP10645 457 aaKnown RBP21.61■■□□□ 1.05
PPP3CA-207ENST00000512215 HNRNPUQ00839 825 aaKnown RBP eCLIP21.58■■□□□ 1.04
PPP3CA-207ENST00000512215 ZNF644Q9H582 1327 aaPredicted RBP21.56■■□□□ 1.04
PPP3CA-207ENST00000512215 SALL2Q9Y467 1007 aaPredicted RBP21.56■■□□□ 1.04
PPP3CA-207ENST00000512215 CLSPNQ9HAW4 1339 aa21.54■■□□□ 1.04
PPP3CA-207ENST00000512215 ERICH3Q5RHP9 1530 aa21.53■■□□□ 1.04
PPP3CA-207ENST00000512215 NPM1P06748 294 aaKnown RBP eCLIP21.53■■□□□ 1.04
PPP3CA-207ENST00000512215 EIF4G2P78344 907 aaKnown RBP eCLIP21.53■■□□□ 1.04
PPP3CA-207ENST00000512215 FKBP8Q14318 412 aa21.5■■□□□ 1.03
PPP3CA-207ENST00000512215 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.03
PPP3CA-207ENST00000512215 IRX6P78412 446 aaPredicted RBP21.48■■□□□ 1.03
PPP3CA-207ENST00000512215 MPHOSPH9Q99550 1183 aa21.46■■□□□ 1.03
PPP3CA-207ENST00000512215 LRRC9Q6ZRR7 1453 aa21.46■■□□□ 1.03
PPP3CA-207ENST00000512215 PPP1R15AO75807 674 aaPredicted RBP21.43■■□□□ 1.02
PPP3CA-207ENST00000512215 PKD2Q13563 968 aa21.42■■□□□ 1.02
PPP3CA-207ENST00000512215 MRS2Q9HD23 443 aa21.42■■□□□ 1.02
PPP3CA-207ENST00000512215 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
PPP3CA-207ENST00000512215 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.01
PPP3CA-207ENST00000512215 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
PPP3CA-207ENST00000512215 L3MBTL2Q969R5 705 aa21.38■■□□□ 1.01
PPP3CA-207ENST00000512215 HSPA5P11021 654 aaKnown RBP21.37■■□□□ 1.01
PPP3CA-207ENST00000512215 DCAF11Q8TEB1 546 aa21.35■■□□□ 1.01
PPP3CA-207ENST00000512215 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
PPP3CA-207ENST00000512215 FGD6Q6ZV73 1430 aa21.33■■□□□ 1.01
PPP3CA-207ENST00000512215 CARD11Q9BXL7 1154 aa21.33■■□□□ 1
PPP3CA-207ENST00000512215 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1
PPP3CA-207ENST00000512215 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
PPP3CA-207ENST00000512215 ANP32EQ9BTT0 268 aa21.3■■□□□ 1
PPP3CA-207ENST00000512215 RRBP1Q9P2E9 1410 aaKnown RBP21.29■■□□□ 1
PPP3CA-207ENST00000512215 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
PPP3CA-207ENST00000512215 GRIN2BQ13224 1484 aa21.28■■□□□ 1
PPP3CA-207ENST00000512215 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
PPP3CA-207ENST00000512215 NUP155O75694 1391 aa21.28■■□□□ 1
PPP3CA-207ENST00000512215 TMC1Q8TDI8 760 aa21.27■■□□□ 1
PPP3CA-207ENST00000512215 NCOA2Q15596 1464 aa21.27■■□□□ 1
PPP3CA-207ENST00000512215 EIF5BO60841 1220 aaKnown RBP21.26■□□□□ 0.99
PPP3CA-207ENST00000512215 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
PPP3CA-207ENST00000512215 PTPRGP23470 1445 aa21.23■□□□□ 0.99
PPP3CA-207ENST00000512215 MYOM3Q5VTT5 1437 aa21.23■□□□□ 0.99
PPP3CA-207ENST00000512215 TIAM1Q13009 1591 aa21.22■□□□□ 0.99
PPP3CA-207ENST00000512215 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
PPP3CA-207ENST00000512215 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
PPP3CA-207ENST00000512215 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
PPP3CA-207ENST00000512215 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
PPP3CA-207ENST00000512215 TIMELESSQ9UNS1 1208 aa21.18■□□□□ 0.98
PPP3CA-207ENST00000512215 CDK13Q14004 1512 aaKnown RBP21.17■□□□□ 0.98
PPP3CA-207ENST00000512215 FYCO1Q9BQS8 1478 aa21.17■□□□□ 0.98
PPP3CA-207ENST00000512215 STAG3Q9UJ98 1225 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms