RNA–Protein interactions for RNA: ENST00000511600.5

RNF4-214, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF4, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-214ENST00000511600 SALL2Q9Y467 1007 aaPredicted RBP9.54□□□□□ -0.88
RNF4-214ENST00000511600 CEP164Q9UPV0 1460 aa9.53□□□□□ -0.88
RNF4-214ENST00000511600 FBLN2P98095 1184 aa9.53□□□□□ -0.88
RNF4-214ENST00000511600 KIF21BO75037 1637 aa9.52□□□□□ -0.89
RNF4-214ENST00000511600 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
RNF4-214ENST00000511600 TOP2BQ02880 1626 aa9.51□□□□□ -0.89
RNF4-214ENST00000511600 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
RNF4-214ENST00000511600 BIVM-ERCC5R4GMW8 1640 aa9.5□□□□□ -0.89
RNF4-214ENST00000511600 PRDM2Q13029 1718 aa9.5□□□□□ -0.89
RNF4-214ENST00000511600 SOGA1O94964 1423 aa9.5□□□□□ -0.89
RNF4-214ENST00000511600 ZBTB47Q9UFB7 747 aaPredicted RBP9.49□□□□□ -0.89
RNF4-214ENST00000511600 NESP48681 1621 aa9.48□□□□□ -0.89
RNF4-214ENST00000511600 CEP162Q5TB80 1403 aa9.48□□□□□ -0.89
RNF4-214ENST00000511600 CADPSQ9ULU8 1353 aa9.48□□□□□ -0.89
RNF4-214ENST00000511600 UBTFP17480 764 aaKnown RBP9.47□□□□□ -0.89
RNF4-214ENST00000511600 NOP58Q9Y2X3 529 aaKnown RBP9.47□□□□□ -0.89
RNF4-214ENST00000511600 CFTRP13569 1480 aa9.46□□□□□ -0.89
RNF4-214ENST00000511600 ITGAEP38570 1179 aa9.46□□□□□ -0.9
RNF4-214ENST00000511600 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
RNF4-214ENST00000511600 NEFMP07197 916 aa9.44□□□□□ -0.9
RNF4-214ENST00000511600 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
RNF4-214ENST00000511600 FANCIQ9NVI1 1328 aa9.43□□□□□ -0.9
RNF4-214ENST00000511600 LAMC3Q9Y6N6 1575 aa9.42□□□□□ -0.9
RNF4-214ENST00000511600 ERICH3Q5RHP9 1530 aa9.42□□□□□ -0.9
RNF4-214ENST00000511600 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
RNF4-214ENST00000511600 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.9
RNF4-214ENST00000511600 RUSC2Q8N2Y8 1516 aa9.4□□□□□ -0.91
RNF4-214ENST00000511600 CLIP1P30622 1438 aa9.38□□□□□ -0.91
RNF4-214ENST00000511600 CUX1P39880 1505 aa9.37□□□□□ -0.91
RNF4-214ENST00000511600 PLPPR3Q6T4P5 718 aa9.37□□□□□ -0.91
RNF4-214ENST00000511600 CYB5RLQ6IPT4 315 aa9.37□□□□□ -0.91
RNF4-214ENST00000511600 A0A0U1RQG5 324 aaPredicted RBP9.35□□□□□ -0.91
RNF4-214ENST00000511600 PPM1GO15355 546 aaPredicted RBP9.35□□□□□ -0.91
RNF4-214ENST00000511600 HNRNPUL2Q1KMD3 747 aaKnown RBP9.35□□□□□ -0.91
RNF4-214ENST00000511600 PLEKHG5O94827 1062 aa9.34□□□□□ -0.91
RNF4-214ENST00000511600 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
RNF4-214ENST00000511600 VPS8Q8N3P4 1428 aa9.34□□□□□ -0.91
RNF4-214ENST00000511600 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
RNF4-214ENST00000511600 NAP1L5Q96NT1 182 aaPredicted RBP9.33□□□□□ -0.92
RNF4-214ENST00000511600 PRXQ9BXM0 1461 aa9.33□□□□□ -0.92
RNF4-214ENST00000511600 ANP32CO43423 234 aa9.33□□□□□ -0.92
RNF4-214ENST00000511600 NCLP19338 710 aaKnown RBP9.33□□□□□ -0.92
RNF4-214ENST00000511600 RAPGEF2Q9Y4G8 1499 aa9.32□□□□□ -0.92
RNF4-214ENST00000511600 HSP90AA1P07900 732 aaKnown RBP9.32□□□□□ -0.92
RNF4-214ENST00000511600 HSP90AA2PQ14568 343 aaPredicted RBP9.31□□□□□ -0.92
RNF4-214ENST00000511600 NPM2Q86SE8 214 aaKnown RBP9.31□□□□□ -0.92
RNF4-214ENST00000511600 PDE4CQ08493 712 aa9.29□□□□□ -0.92
RNF4-214ENST00000511600 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
RNF4-214ENST00000511600 TNNT2P45379 298 aaPredicted RBP9.29□□□□□ -0.92
RNF4-214ENST00000511600 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
RNF4-214ENST00000511600 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
RNF4-214ENST00000511600 DNMBPQ6XZF7 1577 aa9.28□□□□□ -0.92
RNF4-214ENST00000511600 SENP3Q9H4L4 574 aaPredicted RBP9.26□□□□□ -0.93
RNF4-214ENST00000511600 USP35Q9P2H5 1018 aa9.26□□□□□ -0.93
RNF4-214ENST00000511600 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
RNF4-214ENST00000511600 FGD5Q6ZNL6 1462 aa9.26□□□□□ -0.93
RNF4-214ENST00000511600 ZNF326Q5BKZ1 582 aaKnown RBP9.25□□□□□ -0.93
RNF4-214ENST00000511600 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
RNF4-214ENST00000511600 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
RNF4-214ENST00000511600 ZMYND15Q9H091 742 aa9.23□□□□□ -0.93
RNF4-214ENST00000511600 LAS1LQ9Y4W2 734 aaKnown RBP9.21□□□□□ -0.93
RNF4-214ENST00000511600 CUL7Q14999 1698 aa9.21□□□□□ -0.93
RNF4-214ENST00000511600 DDRGK1Q96HY6 314 aa9.21□□□□□ -0.93
RNF4-214ENST00000511600 MSH5O43196 834 aa9.21□□□□□ -0.94
RNF4-214ENST00000511600 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.94
RNF4-214ENST00000511600 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.94
RNF4-214ENST00000511600 CARMIL1Q5VZK9 1371 aa9.21□□□□□ -0.94
RNF4-214ENST00000511600 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
RNF4-214ENST00000511600 THOC2Q8NI27 1593 aaKnown RBP9.2□□□□□ -0.94
RNF4-214ENST00000511600 TOPBP1Q92547 1522 aa9.2□□□□□ -0.94
RNF4-214ENST00000511600 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
RNF4-214ENST00000511600 IRX6P78412 446 aaPredicted RBP9.2□□□□□ -0.94
RNF4-214ENST00000511600 IPO9Q96P70 1041 aaKnown RBP9.2□□□□□ -0.94
RNF4-214ENST00000511600 IFT140Q96RY7 1462 aa9.19□□□□□ -0.94
RNF4-214ENST00000511600 IGF1RP08069 1367 aa9.19□□□□□ -0.94
RNF4-214ENST00000511600 HNRNPUQ00839 825 aaKnown RBP eCLIP9.19□□□□□ -0.94
RNF4-214ENST00000511600 ARAP1Q96P48 1450 aa9.19□□□□□ -0.94
RNF4-214ENST00000511600 FHAD1B1AJZ9 1412 aa9.17□□□□□ -0.94
RNF4-214ENST00000511600 WDR62O43379 1518 aa9.17□□□□□ -0.94
RNF4-214ENST00000511600 PDIA4P13667 645 aaKnown RBP9.17□□□□□ -0.94
RNF4-214ENST00000511600 MAP3K1Q13233 1512 aa9.17□□□□□ -0.94
RNF4-214ENST00000511600 POLA1P09884 1462 aaPredicted RBP9.16□□□□□ -0.94
RNF4-214ENST00000511600 EFCAB5A4FU69 1503 aa9.16□□□□□ -0.94
RNF4-214ENST00000511600 CNGB1Q14028 1251 aaPredicted RBP9.15□□□□□ -0.94
RNF4-214ENST00000511600 TRIM44Q96DX7 344 aaPredicted RBP9.15□□□□□ -0.94
RNF4-214ENST00000511600 RRP9O43818 475 aaKnown RBP9.14□□□□□ -0.95
RNF4-214ENST00000511600 ARHGAP35Q9NRY4 1499 aa9.14□□□□□ -0.95
RNF4-214ENST00000511600 L1TD1Q5T7N2 865 aaKnown RBP9.14□□□□□ -0.95
RNF4-214ENST00000511600 ANP32BQ92688 251 aaKnown RBP9.14□□□□□ -0.95
RNF4-214ENST00000511600 GSE1Q14687 1217 aa9.13□□□□□ -0.95
RNF4-214ENST00000511600 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
RNF4-214ENST00000511600 DDX10Q13206 875 aaKnown RBP9.13□□□□□ -0.95
RNF4-214ENST00000511600 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
RNF4-214ENST00000511600 FAM43AQ8N2R8 423 aa9.12□□□□□ -0.95
RNF4-214ENST00000511600 CTTNBP2Q8WZ74 1663 aa9.11□□□□□ -0.95
RNF4-214ENST00000511600 ADRA2BP18089 450 aa9.11□□□□□ -0.95
RNF4-214ENST00000511600 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
RNF4-214ENST00000511600 RAD54L2Q9Y4B4 1467 aa9.09□□□□□ -0.95
RNF4-214ENST00000511600 ABCA5Q8WWZ7 1642 aa9.09□□□□□ -0.95
RNF4-214ENST00000511600 BRPF3Q9ULD4 1205 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms