RNA–Protein interactions for RNA: ENST00000511049.5

CAST-234, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-234ENST00000511049 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
CAST-234ENST00000511049 TOPBP1Q92547 1522 aa11.23□□□□□ -0.61
CAST-234ENST00000511049 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.62
CAST-234ENST00000511049 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
CAST-234ENST00000511049 SIN3AQ96ST3 1273 aa11.19□□□□□ -0.62
CAST-234ENST00000511049 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
CAST-234ENST00000511049 ZNF316A6NFI3 1004 aaPredicted RBP11.18□□□□□ -0.62
CAST-234ENST00000511049 CHMP7Q8WUX9 453 aaPredicted RBP11.17□□□□□ -0.62
CAST-234ENST00000511049 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
CAST-234ENST00000511049 RRP7BPQ9NSQ0 103 aa11.16□□□□□ -0.62
CAST-234ENST00000511049 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
CAST-234ENST00000511049 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.62
CAST-234ENST00000511049 CNGB1Q14028 1251 aaPredicted RBP11.15□□□□□ -0.63
CAST-234ENST00000511049 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
CAST-234ENST00000511049 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
CAST-234ENST00000511049 MIER1Q8N108 512 aa11.13□□□□□ -0.63
CAST-234ENST00000511049 ERICH3Q5RHP9 1530 aa11.13□□□□□ -0.63
CAST-234ENST00000511049 TRIM52Q96A61 297 aa11.13□□□□□ -0.63
CAST-234ENST00000511049 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
CAST-234ENST00000511049 ZNF608Q9ULD9 1512 aaPredicted RBP11.1□□□□□ -0.63
CAST-234ENST00000511049 FOXD1Q16676 465 aa11.08□□□□□ -0.64
CAST-234ENST00000511049 RAB3GAP2Q9H2M9 1393 aa11.08□□□□□ -0.64
CAST-234ENST00000511049 ABCA10Q8WWZ4 1543 aa11.07□□□□□ -0.64
CAST-234ENST00000511049 KIF21AQ7Z4S6 1674 aa11.07□□□□□ -0.64
CAST-234ENST00000511049 DHX57Q6P158 1386 aaKnown RBP11.06□□□□□ -0.64
CAST-234ENST00000511049 SCAF1Q9H7N4 1312 aaKnown RBP11.05□□□□□ -0.64
CAST-234ENST00000511049 FHAD1B1AJZ9 1412 aa11.04□□□□□ -0.64
CAST-234ENST00000511049 ZNF644Q9H582 1327 aaPredicted RBP11.03□□□□□ -0.64
CAST-234ENST00000511049 LRRC9Q6ZRR7 1453 aa11.02□□□□□ -0.64
CAST-234ENST00000511049 PCF11O94913 1555 aaKnown RBP11.01□□□□□ -0.65
CAST-234ENST00000511049 DDX10Q13206 875 aaKnown RBP11.01□□□□□ -0.65
CAST-234ENST00000511049 ZNF326Q5BKZ1 582 aaKnown RBP11.01□□□□□ -0.65
CAST-234ENST00000511049 GTF3C3Q9Y5Q9 886 aa11□□□□□ -0.65
CAST-234ENST00000511049 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
CAST-234ENST00000511049 TARBP1Q13395 1621 aaKnown RBP10.99□□□□□ -0.65
CAST-234ENST00000511049 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
CAST-234ENST00000511049 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
CAST-234ENST00000511049 MRC2Q9UBG0 1479 aa10.97□□□□□ -0.65
CAST-234ENST00000511049 TIAM1Q13009 1591 aa10.97□□□□□ -0.65
CAST-234ENST00000511049 FMN1Q68DA7 1419 aa10.97□□□□□ -0.65
CAST-234ENST00000511049 JPH4Q96JJ6 628 aa10.96□□□□□ -0.66
CAST-234ENST00000511049 SETD5Q9C0A6 1442 aa10.96□□□□□ -0.66
CAST-234ENST00000511049 RRBP1Q9P2E9 1410 aaKnown RBP10.96□□□□□ -0.66
CAST-234ENST00000511049 ABCA5Q8WWZ7 1642 aa10.96□□□□□ -0.66
CAST-234ENST00000511049 SNAPC4Q5SXM2 1469 aa10.95□□□□□ -0.66
CAST-234ENST00000511049 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
CAST-234ENST00000511049 CDK13Q14004 1512 aaKnown RBP10.94□□□□□ -0.66
CAST-234ENST00000511049 SENP3-EIF4A1A0A087X0R7 540 aa10.92□□□□□ -0.66
CAST-234ENST00000511049 CASKIN1Q8WXD9 1431 aa10.92□□□□□ -0.66
CAST-234ENST00000511049 CFDP1Q9UEE9 299 aaPredicted RBP10.92□□□□□ -0.66
CAST-234ENST00000511049 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
CAST-234ENST00000511049 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
CAST-234ENST00000511049 PTPRKQ15262 1439 aa10.9□□□□□ -0.67
CAST-234ENST00000511049 FGD6Q6ZV73 1430 aa10.9□□□□□ -0.67
CAST-234ENST00000511049 TONSLQ96HA7 1378 aa10.9□□□□□ -0.67
CAST-234ENST00000511049 NCOA2Q15596 1464 aa10.89□□□□□ -0.67
CAST-234ENST00000511049 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
CAST-234ENST00000511049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.89□□□□□ -0.679e-7■■■□□ 17.1
CAST-234ENST00000511049 FYCO1Q9BQS8 1478 aa10.87□□□□□ -0.67
CAST-234ENST00000511049 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
CAST-234ENST00000511049 SHROOM2Q13796 1616 aa10.86□□□□□ -0.67
CAST-234ENST00000511049 PLEKHD1A6NEE1 506 aa10.86□□□□□ -0.67
CAST-234ENST00000511049 CUL7Q14999 1698 aa10.86□□□□□ -0.67
CAST-234ENST00000511049 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
CAST-234ENST00000511049 SENP3Q9H4L4 574 aaPredicted RBP10.86□□□□□ -0.67
CAST-234ENST00000511049 PRG4Q92954 1404 aaPredicted RBP10.86□□□□□ -0.67
CAST-234ENST00000511049 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
CAST-234ENST00000511049 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
CAST-234ENST00000511049 IFT140Q96RY7 1462 aa10.85□□□□□ -0.67
CAST-234ENST00000511049 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
CAST-234ENST00000511049 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
CAST-234ENST00000511049 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
CAST-234ENST00000511049 BCANQ96GW7 911 aa10.82□□□□□ -0.68
CAST-234ENST00000511049 MPHOSPH9Q99550 1183 aa10.82□□□□□ -0.68
CAST-234ENST00000511049 CTTNBP2Q8WZ74 1663 aa10.81□□□□□ -0.68
CAST-234ENST00000511049 EFCAB5A4FU69 1503 aa10.81□□□□□ -0.68
CAST-234ENST00000511049 MAGI3Q5TCQ9 1506 aa10.81□□□□□ -0.68
CAST-234ENST00000511049 CCDC18Q5T9S5 1454 aa10.81□□□□□ -0.68
CAST-234ENST00000511049 EPRSP07814 1512 aaKnown RBP10.81□□□□□ -0.68
CAST-234ENST00000511049 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
CAST-234ENST00000511049 PPP1R15AO75807 674 aaPredicted RBP10.8□□□□□ -0.68
CAST-234ENST00000511049 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
CAST-234ENST00000511049 CLSPNQ9HAW4 1339 aa10.79□□□□□ -0.68
CAST-234ENST00000511049 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
CAST-234ENST00000511049 MAPKBP1O60336 1514 aa10.78□□□□□ -0.68
CAST-234ENST00000511049 L3MBTL2Q969R5 705 aa10.78□□□□□ -0.68
CAST-234ENST00000511049 TSPY4P0CV99 314 aa10.77□□□□□ -0.69
CAST-234ENST00000511049 TSPY10P0CW01 314 aa10.77□□□□□ -0.69
CAST-234ENST00000511049 ADAMTS12P58397 1594 aa10.77□□□□□ -0.69
CAST-234ENST00000511049 KIAA0586Q9BVV6 1533 aa10.76□□□□□ -0.69
CAST-234ENST00000511049 NAIPQ13075 1403 aa10.75□□□□□ -0.69
CAST-234ENST00000511049 CARMIL2Q6F5E8 1435 aa10.75□□□□□ -0.69
CAST-234ENST00000511049 PKD2Q13563 968 aa10.75□□□□□ -0.69
CAST-234ENST00000511049 PTPRGP23470 1445 aa10.74□□□□□ -0.69
CAST-234ENST00000511049 DISP1Q96F81 1524 aa10.74□□□□□ -0.69
CAST-234ENST00000511049 NUP153P49790 1475 aaKnown RBP10.73□□□□□ -0.69
CAST-234ENST00000511049 ANP32CO43423 234 aa10.73□□□□□ -0.69
CAST-234ENST00000511049 CLASP1Q7Z460 1538 aa10.73□□□□□ -0.69
CAST-234ENST00000511049 HSPA5P11021 654 aaKnown RBP10.73□□□□□ -0.69
CAST-234ENST00000511049 SYNJ2O15056 1496 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms