RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
SH3TC2-208ENST00000510779 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
SH3TC2-208ENST00000510779 PPP1R15AO75807 674 aaPredicted RBP17.09■□□□□ 0.33
SH3TC2-208ENST00000510779 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.33
SH3TC2-208ENST00000510779 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
SH3TC2-208ENST00000510779 NBR1Q14596 966 aa17.05■□□□□ 0.32
SH3TC2-208ENST00000510779 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
SH3TC2-208ENST00000510779 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
SH3TC2-208ENST00000510779 WDR97A6NE52 1622 aa17.02■□□□□ 0.32
SH3TC2-208ENST00000510779 P3H3Q8IVL6 736 aa17.02■□□□□ 0.31
SH3TC2-208ENST00000510779 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
SH3TC2-208ENST00000510779 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
SH3TC2-208ENST00000510779 SETD5Q9C0A6 1442 aa16.99■□□□□ 0.31
SH3TC2-208ENST00000510779 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
SH3TC2-208ENST00000510779 B4GALNT3Q6L9W6 998 aa16.97■□□□□ 0.31
SH3TC2-208ENST00000510779 TONSLQ96HA7 1378 aa16.96■□□□□ 0.3
SH3TC2-208ENST00000510779 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
SH3TC2-208ENST00000510779 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
SH3TC2-208ENST00000510779 PPP4R2Q9NY27 417 aa16.89■□□□□ 0.29
SH3TC2-208ENST00000510779 CUX2O14529 1486 aa16.88■□□□□ 0.29
SH3TC2-208ENST00000510779 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
SH3TC2-208ENST00000510779 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
SH3TC2-208ENST00000510779 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
SH3TC2-208ENST00000510779 PHLDB1Q86UU1 1377 aa16.84■□□□□ 0.29
SH3TC2-208ENST00000510779 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
SH3TC2-208ENST00000510779 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
SH3TC2-208ENST00000510779 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.29
SH3TC2-208ENST00000510779 KIF27Q86VH2 1401 aa16.83■□□□□ 0.29
SH3TC2-208ENST00000510779 CFTRP13569 1480 aa16.83■□□□□ 0.28
SH3TC2-208ENST00000510779 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
SH3TC2-208ENST00000510779 NESP48681 1621 aa16.82■□□□□ 0.28
SH3TC2-208ENST00000510779 PAK3O75914 559 aaPredicted RBP16.8■□□□□ 0.28
SH3TC2-208ENST00000510779 CCDC184Q52MB2 194 aa16.79■□□□□ 0.28
SH3TC2-208ENST00000510779 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
SH3TC2-208ENST00000510779 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
SH3TC2-208ENST00000510779 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
SH3TC2-208ENST00000510779 POLR3GLQ9BT43 218 aa16.76■□□□□ 0.27
SH3TC2-208ENST00000510779 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
SH3TC2-208ENST00000510779 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
SH3TC2-208ENST00000510779 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
SH3TC2-208ENST00000510779 ANO8Q9HCE9 1232 aaPredicted RBP16.75■□□□□ 0.27
SH3TC2-208ENST00000510779 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
SH3TC2-208ENST00000510779 NPM2Q86SE8 214 aaKnown RBP16.73■□□□□ 0.27
SH3TC2-208ENST00000510779 CCDC136Q96JN2 1154 aa16.71■□□□□ 0.27
SH3TC2-208ENST00000510779 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
SH3TC2-208ENST00000510779 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
SH3TC2-208ENST00000510779 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
SH3TC2-208ENST00000510779 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
SH3TC2-208ENST00000510779 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
SH3TC2-208ENST00000510779 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
SH3TC2-208ENST00000510779 EIF4G2P78344 907 aaKnown RBP eCLIP16.68■□□□□ 0.26
SH3TC2-208ENST00000510779 TIAM1Q13009 1591 aa16.66■□□□□ 0.26
SH3TC2-208ENST00000510779 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
SH3TC2-208ENST00000510779 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
SH3TC2-208ENST00000510779 CUX1P39880 1505 aa16.62■□□□□ 0.25
SH3TC2-208ENST00000510779 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
SH3TC2-208ENST00000510779 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
SH3TC2-208ENST00000510779 IPO9Q96P70 1041 aaKnown RBP16.61■□□□□ 0.25
SH3TC2-208ENST00000510779 PRKRIP1Q9H875 184 aaPredicted RBP16.61■□□□□ 0.25
SH3TC2-208ENST00000510779 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
SH3TC2-208ENST00000510779 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
SH3TC2-208ENST00000510779 LAS1LQ9Y4W2 734 aaKnown RBP16.61■□□□□ 0.25
SH3TC2-208ENST00000510779 IGF1RP08069 1367 aa16.59■□□□□ 0.25
SH3TC2-208ENST00000510779 FOXD1Q16676 465 aa16.59■□□□□ 0.25
SH3TC2-208ENST00000510779 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
SH3TC2-208ENST00000510779 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
SH3TC2-208ENST00000510779 FHOD3Q2V2M9 1422 aa16.58■□□□□ 0.24
SH3TC2-208ENST00000510779 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
SH3TC2-208ENST00000510779 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
SH3TC2-208ENST00000510779 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
SH3TC2-208ENST00000510779 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
SH3TC2-208ENST00000510779 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
SH3TC2-208ENST00000510779 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
SH3TC2-208ENST00000510779 AKNAQ7Z591 1439 aa16.55■□□□□ 0.24
SH3TC2-208ENST00000510779 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
SH3TC2-208ENST00000510779 NEFMP07197 916 aa16.53■□□□□ 0.24
SH3TC2-208ENST00000510779 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
SH3TC2-208ENST00000510779 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
SH3TC2-208ENST00000510779 ARID3CA6NKF2 412 aa16.5■□□□□ 0.23
SH3TC2-208ENST00000510779 CNTLNQ9NXG0 1405 aa16.5■□□□□ 0.23
SH3TC2-208ENST00000510779 FGD6Q6ZV73 1430 aa16.48■□□□□ 0.23
SH3TC2-208ENST00000510779 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
SH3TC2-208ENST00000510779 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
SH3TC2-208ENST00000510779 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
SH3TC2-208ENST00000510779 PTPRKQ15262 1439 aa16.46■□□□□ 0.23
SH3TC2-208ENST00000510779 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.23
SH3TC2-208ENST00000510779 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
SH3TC2-208ENST00000510779 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.23
SH3TC2-208ENST00000510779 PCF11O94913 1555 aaKnown RBP16.45■□□□□ 0.22
SH3TC2-208ENST00000510779 EIF5BO60841 1220 aaKnown RBP16.44■□□□□ 0.22
SH3TC2-208ENST00000510779 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
SH3TC2-208ENST00000510779 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
SH3TC2-208ENST00000510779 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
SH3TC2-208ENST00000510779 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
SH3TC2-208ENST00000510779 MPHOSPH9Q99550 1183 aa16.42■□□□□ 0.22
SH3TC2-208ENST00000510779 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
SH3TC2-208ENST00000510779 KIF7Q2M1P5 1343 aa16.42■□□□□ 0.22
SH3TC2-208ENST00000510779 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
SH3TC2-208ENST00000510779 NAIPQ13075 1403 aa16.41■□□□□ 0.22
SH3TC2-208ENST00000510779 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms