RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
SH3TC2-208ENST00000510779 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
SH3TC2-208ENST00000510779 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
SH3TC2-208ENST00000510779 HRCP23327 699 aa20.52■□□□□ 0.88
SH3TC2-208ENST00000510779 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
SH3TC2-208ENST00000510779 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.84
SH3TC2-208ENST00000510779 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
SH3TC2-208ENST00000510779 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
SH3TC2-208ENST00000510779 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
SH3TC2-208ENST00000510779 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
SH3TC2-208ENST00000510779 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
SH3TC2-208ENST00000510779 PELP1Q8IZL8 1130 aaKnown RBP19.62■□□□□ 0.73
SH3TC2-208ENST00000510779 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
SH3TC2-208ENST00000510779 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
SH3TC2-208ENST00000510779 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
SH3TC2-208ENST00000510779 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
SH3TC2-208ENST00000510779 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
SH3TC2-208ENST00000510779 ZEB1P37275 1124 aaPredicted RBP19.35■□□□□ 0.69
SH3TC2-208ENST00000510779 FAM9AQ8IZU1 332 aaPredicted RBP19.27■□□□□ 0.68
SH3TC2-208ENST00000510779 ABCC9O60706 1549 aa19.13■□□□□ 0.65
SH3TC2-208ENST00000510779 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
SH3TC2-208ENST00000510779 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
SH3TC2-208ENST00000510779 ACIN1Q9UKV3 1341 aaKnown RBP18.97■□□□□ 0.63
SH3TC2-208ENST00000510779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
SH3TC2-208ENST00000510779 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
SH3TC2-208ENST00000510779 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
SH3TC2-208ENST00000510779 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
SH3TC2-208ENST00000510779 TTBK1Q5TCY1 1321 aaPredicted RBP18.86■□□□□ 0.61
SH3TC2-208ENST00000510779 DIEXFQ68CQ4 756 aaKnown RBP18.8■□□□□ 0.6
SH3TC2-208ENST00000510779 MYT1Q01538 1121 aa18.78■□□□□ 0.6
SH3TC2-208ENST00000510779 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
SH3TC2-208ENST00000510779 NACADO15069 1562 aa18.6■□□□□ 0.57
SH3TC2-208ENST00000510779 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
SH3TC2-208ENST00000510779 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
SH3TC2-208ENST00000510779 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
SH3TC2-208ENST00000510779 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
SH3TC2-208ENST00000510779 MIER1Q8N108 512 aa18.31■□□□□ 0.52
SH3TC2-208ENST00000510779 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
SH3TC2-208ENST00000510779 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
SH3TC2-208ENST00000510779 UBTFP17480 764 aaKnown RBP18.21■□□□□ 0.51
SH3TC2-208ENST00000510779 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
SH3TC2-208ENST00000510779 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
SH3TC2-208ENST00000510779 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
SH3TC2-208ENST00000510779 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
SH3TC2-208ENST00000510779 CEP162Q5TB80 1403 aa18.03■□□□□ 0.48
SH3TC2-208ENST00000510779 APLP2Q06481 763 aa17.94■□□□□ 0.46
SH3TC2-208ENST00000510779 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
SH3TC2-208ENST00000510779 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
SH3TC2-208ENST00000510779 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
SH3TC2-208ENST00000510779 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.45
SH3TC2-208ENST00000510779 BCANQ96GW7 911 aa17.89■□□□□ 0.45
SH3TC2-208ENST00000510779 SOGA1O94964 1423 aa17.87■□□□□ 0.45
SH3TC2-208ENST00000510779 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
SH3TC2-208ENST00000510779 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
SH3TC2-208ENST00000510779 WIZO95785 1651 aa17.85■□□□□ 0.45
SH3TC2-208ENST00000510779 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
SH3TC2-208ENST00000510779 ANP32EQ9BTT0 268 aa17.82■□□□□ 0.44
SH3TC2-208ENST00000510779 TSHZ2Q9NRE2 1034 aa17.82■□□□□ 0.44
SH3TC2-208ENST00000510779 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
SH3TC2-208ENST00000510779 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
SH3TC2-208ENST00000510779 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.43
SH3TC2-208ENST00000510779 ITGAEP38570 1179 aa17.66■□□□□ 0.42
SH3TC2-208ENST00000510779 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
SH3TC2-208ENST00000510779 FKBP8Q14318 412 aa17.65■□□□□ 0.42
SH3TC2-208ENST00000510779 KCNH8Q96L42 1107 aa17.65■□□□□ 0.42
SH3TC2-208ENST00000510779 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
SH3TC2-208ENST00000510779 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
SH3TC2-208ENST00000510779 CLIP1P30622 1438 aa17.6■□□□□ 0.41
SH3TC2-208ENST00000510779 NEFLP07196 543 aa17.57■□□□□ 0.4
SH3TC2-208ENST00000510779 EEA1Q15075 1411 aa17.56■□□□□ 0.4
SH3TC2-208ENST00000510779 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
SH3TC2-208ENST00000510779 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
SH3TC2-208ENST00000510779 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
SH3TC2-208ENST00000510779 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
SH3TC2-208ENST00000510779 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
SH3TC2-208ENST00000510779 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
SH3TC2-208ENST00000510779 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
SH3TC2-208ENST00000510779 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
SH3TC2-208ENST00000510779 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
SH3TC2-208ENST00000510779 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
SH3TC2-208ENST00000510779 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
SH3TC2-208ENST00000510779 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
SH3TC2-208ENST00000510779 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
SH3TC2-208ENST00000510779 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
SH3TC2-208ENST00000510779 RAPGEF2Q9Y4G8 1499 aa17.33■□□□□ 0.37
SH3TC2-208ENST00000510779 IRX6P78412 446 aaPredicted RBP17.31■□□□□ 0.36
SH3TC2-208ENST00000510779 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
SH3TC2-208ENST00000510779 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
SH3TC2-208ENST00000510779 ANP32CO43423 234 aa17.27■□□□□ 0.36
SH3TC2-208ENST00000510779 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
SH3TC2-208ENST00000510779 KIF21BO75037 1637 aa17.24■□□□□ 0.35
SH3TC2-208ENST00000510779 MSH5O43196 834 aa17.22■□□□□ 0.35
SH3TC2-208ENST00000510779 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
SH3TC2-208ENST00000510779 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
SH3TC2-208ENST00000510779 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
SH3TC2-208ENST00000510779 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
SH3TC2-208ENST00000510779 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
SH3TC2-208ENST00000510779 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
SH3TC2-208ENST00000510779 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
SH3TC2-208ENST00000510779 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms