RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 IGF1RP08069 1367 aa16.67■□□□□ 0.26
NEK1-205ENST00000510108 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
NEK1-205ENST00000510108 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
NEK1-205ENST00000510108 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
NEK1-205ENST00000510108 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
NEK1-205ENST00000510108 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
NEK1-205ENST00000510108 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
NEK1-205ENST00000510108 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.25
NEK1-205ENST00000510108 ADAMTS12P58397 1594 aa16.58■□□□□ 0.25
NEK1-205ENST00000510108 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
NEK1-205ENST00000510108 TNIKQ9UKE5 1360 aa16.56■□□□□ 0.24
NEK1-205ENST00000510108 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
NEK1-205ENST00000510108 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.24
NEK1-205ENST00000510108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
NEK1-205ENST00000510108 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.24
NEK1-205ENST00000510108 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
NEK1-205ENST00000510108 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
NEK1-205ENST00000510108 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
NEK1-205ENST00000510108 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
NEK1-205ENST00000510108 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
NEK1-205ENST00000510108 ZBTB22O15209 634 aa16.43■□□□□ 0.22
NEK1-205ENST00000510108 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
NEK1-205ENST00000510108 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
NEK1-205ENST00000510108 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
NEK1-205ENST00000510108 CLIP1P30622 1438 aa16.34■□□□□ 0.21
NEK1-205ENST00000510108 NUP160Q12769 1436 aa16.33■□□□□ 0.21
NEK1-205ENST00000510108 CHD1O14646 1710 aa16.32■□□□□ 0.2
NEK1-205ENST00000510108 EFCAB5A4FU69 1503 aa16.32■□□□□ 0.2
NEK1-205ENST00000510108 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
NEK1-205ENST00000510108 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
NEK1-205ENST00000510108 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
NEK1-205ENST00000510108 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
NEK1-205ENST00000510108 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
NEK1-205ENST00000510108 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
NEK1-205ENST00000510108 FBLN2P98095 1184 aa16.27■□□□□ 0.2
NEK1-205ENST00000510108 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
NEK1-205ENST00000510108 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
NEK1-205ENST00000510108 UGGT2Q9NYU1 1516 aa16.26■□□□□ 0.19
NEK1-205ENST00000510108 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
NEK1-205ENST00000510108 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
NEK1-205ENST00000510108 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
NEK1-205ENST00000510108 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
NEK1-205ENST00000510108 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
NEK1-205ENST00000510108 KIAA0556O60303 1618 aa16.17■□□□□ 0.18
NEK1-205ENST00000510108 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
NEK1-205ENST00000510108 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
NEK1-205ENST00000510108 FHOD3Q2V2M9 1422 aa16.12■□□□□ 0.17
NEK1-205ENST00000510108 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
NEK1-205ENST00000510108 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
NEK1-205ENST00000510108 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
NEK1-205ENST00000510108 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
NEK1-205ENST00000510108 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
NEK1-205ENST00000510108 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
NEK1-205ENST00000510108 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
NEK1-205ENST00000510108 JPH4Q96JJ6 628 aa16.05■□□□□ 0.16
NEK1-205ENST00000510108 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
NEK1-205ENST00000510108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
NEK1-205ENST00000510108 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
NEK1-205ENST00000510108 CFAP43Q8NDM7 1665 aa16.03■□□□□ 0.16
NEK1-205ENST00000510108 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
NEK1-205ENST00000510108 HECW1Q76N89 1606 aa16■□□□□ 0.15
NEK1-205ENST00000510108 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
NEK1-205ENST00000510108 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
NEK1-205ENST00000510108 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
NEK1-205ENST00000510108 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
NEK1-205ENST00000510108 RAPGEF6Q8TEU7 1601 aa15.97■□□□□ 0.15
NEK1-205ENST00000510108 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
NEK1-205ENST00000510108 ABCA8O94911 1581 aa15.95■□□□□ 0.14
NEK1-205ENST00000510108 CCDC18Q5T9S5 1454 aa15.94■□□□□ 0.14
NEK1-205ENST00000510108 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
NEK1-205ENST00000510108 NUP153P49790 1475 aaKnown RBP15.9■□□□□ 0.14
NEK1-205ENST00000510108 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
NEK1-205ENST00000510108 PLB1Q6P1J6 1458 aa15.89■□□□□ 0.13
NEK1-205ENST00000510108 APLP2Q06481 763 aa15.89■□□□□ 0.13
NEK1-205ENST00000510108 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
NEK1-205ENST00000510108 PTPRGP23470 1445 aa15.88■□□□□ 0.13
NEK1-205ENST00000510108 EHBP1L1Q8N3D4 1523 aa15.85■□□□□ 0.13
NEK1-205ENST00000510108 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
NEK1-205ENST00000510108 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
NEK1-205ENST00000510108 ABCC2Q92887 1545 aa15.84■□□□□ 0.13
NEK1-205ENST00000510108 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
NEK1-205ENST00000510108 UACAQ9BZF9 1416 aa15.83■□□□□ 0.13
NEK1-205ENST00000510108 CDK13Q14004 1512 aaKnown RBP15.82■□□□□ 0.12
NEK1-205ENST00000510108 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
NEK1-205ENST00000510108 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
NEK1-205ENST00000510108 ARHGEF11O15085 1522 aa15.81■□□□□ 0.12
NEK1-205ENST00000510108 MAGI3Q5TCQ9 1506 aa15.81■□□□□ 0.12
NEK1-205ENST00000510108 SUPT6HQ7KZ85 1726 aaKnown RBP15.78■□□□□ 0.12
NEK1-205ENST00000510108 RIMBP3CA6NJZ7 1639 aa15.77■□□□□ 0.12
NEK1-205ENST00000510108 RIMBP3BA6NNM3 1639 aa15.77■□□□□ 0.12
NEK1-205ENST00000510108 ADCY10Q96PN6 1610 aa15.77■□□□□ 0.12
NEK1-205ENST00000510108 RIMBP3Q9UFD9 1639 aa15.77■□□□□ 0.12
NEK1-205ENST00000510108 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
NEK1-205ENST00000510108 ATP10BO94823 1461 aa15.76■□□□□ 0.11
NEK1-205ENST00000510108 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
NEK1-205ENST00000510108 KDM5BQ9UGL1 1544 aa15.75■□□□□ 0.11
NEK1-205ENST00000510108 PPARGC1BQ86YN6 1023 aaKnown RBP15.75■□□□□ 0.11
NEK1-205ENST00000510108 CAPN15O75808 1086 aa15.74■□□□□ 0.11
NEK1-205ENST00000510108 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
NEK1-205ENST00000510108 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms