RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.9
SCAMP1-203ENST00000510030 SYNJ2O15056 1496 aa26.9■■□□□ 1.9
SCAMP1-203ENST00000510030 CYB5RLQ6IPT4 315 aa26.88■■□□□ 1.89
SCAMP1-203ENST00000510030 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
SCAMP1-203ENST00000510030 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
SCAMP1-203ENST00000510030 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.89
SCAMP1-203ENST00000510030 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
SCAMP1-203ENST00000510030 CEP162Q5TB80 1403 aa26.76■■□□□ 1.87
SCAMP1-203ENST00000510030 CHMP7Q8WUX9 453 aaPredicted RBP26.76■■□□□ 1.87
SCAMP1-203ENST00000510030 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
SCAMP1-203ENST00000510030 CLIP1P30622 1438 aa26.68■■□□□ 1.86
SCAMP1-203ENST00000510030 IQGAP2Q13576 1575 aa26.67■■□□□ 1.86
SCAMP1-203ENST00000510030 KIAA0586Q9BVV6 1533 aa26.65■■□□□ 1.86
SCAMP1-203ENST00000510030 NUP160Q12769 1436 aa26.65■■□□□ 1.86
SCAMP1-203ENST00000510030 EFCAB5A4FU69 1503 aa26.64■■□□□ 1.85
SCAMP1-203ENST00000510030 CEP170Q5SW79 1584 aa26.59■■□□□ 1.85
SCAMP1-203ENST00000510030 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
SCAMP1-203ENST00000510030 UGGT2Q9NYU1 1516 aa26.52■■□□□ 1.84
SCAMP1-203ENST00000510030 SAMD9Q5K651 1589 aa26.5■■□□□ 1.83
SCAMP1-203ENST00000510030 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
SCAMP1-203ENST00000510030 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
SCAMP1-203ENST00000510030 VPS8Q8N3P4 1428 aa26.42■■□□□ 1.82
SCAMP1-203ENST00000510030 RANGAP1P46060 587 aaPredicted RBP26.42■■□□□ 1.82
SCAMP1-203ENST00000510030 CARMIL2Q6F5E8 1435 aa26.39■■□□□ 1.82
SCAMP1-203ENST00000510030 SHROOM2Q13796 1616 aa26.37■■□□□ 1.81
SCAMP1-203ENST00000510030 KIAA0556O60303 1618 aa26.36■■□□□ 1.81
SCAMP1-203ENST00000510030 FMN1Q68DA7 1419 aa26.36■■□□□ 1.81
SCAMP1-203ENST00000510030 JPH4Q96JJ6 628 aa26.32■■□□□ 1.8
SCAMP1-203ENST00000510030 DISP1Q96F81 1524 aa26.3■■□□□ 1.8
SCAMP1-203ENST00000510030 FHOD3Q2V2M9 1422 aa26.29■■□□□ 1.8
SCAMP1-203ENST00000510030 FYCO1Q9BQS8 1478 aa26.23■■□□□ 1.79
SCAMP1-203ENST00000510030 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
SCAMP1-203ENST00000510030 APLP2Q06481 763 aa26.19■■□□□ 1.78
SCAMP1-203ENST00000510030 P3H3Q8IVL6 736 aa26.19■■□□□ 1.78
SCAMP1-203ENST00000510030 CASKIN1Q8WXD9 1431 aa26.19■■□□□ 1.78
SCAMP1-203ENST00000510030 PCF11O94913 1555 aaKnown RBP26.16■■□□□ 1.78
SCAMP1-203ENST00000510030 HECW1Q76N89 1606 aa26.14■■□□□ 1.77
SCAMP1-203ENST00000510030 MAP3K1Q13233 1512 aa26.14■■□□□ 1.77
SCAMP1-203ENST00000510030 CCDC18Q5T9S5 1454 aa26.08■■□□□ 1.77
SCAMP1-203ENST00000510030 RAPGEF6Q8TEU7 1601 aa26.07■■□□□ 1.76
SCAMP1-203ENST00000510030 CFAP43Q8NDM7 1665 aa26.06■■□□□ 1.76
SCAMP1-203ENST00000510030 PTPRGP23470 1445 aa26.05■■□□□ 1.76
SCAMP1-203ENST00000510030 TIAM1Q13009 1591 aa26.03■■□□□ 1.76
SCAMP1-203ENST00000510030 ABCA8O94911 1581 aa25.99■■□□□ 1.75
SCAMP1-203ENST00000510030 ATP1B4Q9UN42 357 aaPredicted RBP25.94■■□□□ 1.74
SCAMP1-203ENST00000510030 EPRSP07814 1512 aaKnown RBP25.93■■□□□ 1.74
SCAMP1-203ENST00000510030 PLB1Q6P1J6 1458 aa25.92■■□□□ 1.74
SCAMP1-203ENST00000510030 UACAQ9BZF9 1416 aa25.92■■□□□ 1.74
SCAMP1-203ENST00000510030 NUP153P49790 1475 aaKnown RBP25.91■■□□□ 1.74
SCAMP1-203ENST00000510030 LRRIQ1Q96JM4 1722 aa25.9■■□□□ 1.74
SCAMP1-203ENST00000510030 KIF13AQ9H1H9 1805 aa25.9■■□□□ 1.74
SCAMP1-203ENST00000510030 ABCC2Q92887 1545 aa25.89■■□□□ 1.74
SCAMP1-203ENST00000510030 UHRF1BP1LA0JNW5 1464 aa25.89■■□□□ 1.73
SCAMP1-203ENST00000510030 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
SCAMP1-203ENST00000510030 ADCY10Q96PN6 1610 aa25.88■■□□□ 1.73
SCAMP1-203ENST00000510030 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
SCAMP1-203ENST00000510030 CDK11AQ9UQ88 783 aaPredicted RBP25.86■■□□□ 1.73
SCAMP1-203ENST00000510030 EHBP1L1Q8N3D4 1523 aa25.85■■□□□ 1.73
SCAMP1-203ENST00000510030 MTUS2Q5JR59 1369 aa25.82■■□□□ 1.72
SCAMP1-203ENST00000510030 CDK13Q14004 1512 aaKnown RBP25.79■■□□□ 1.72
SCAMP1-203ENST00000510030 SUPT6HQ7KZ85 1726 aaKnown RBP25.76■■□□□ 1.71
SCAMP1-203ENST00000510030 FAM69CQ0P6D2 419 aa25.75■■□□□ 1.71
SCAMP1-203ENST00000510030 KDM5BQ9UGL1 1544 aa25.73■■□□□ 1.71
SCAMP1-203ENST00000510030 ABCC10Q5T3U5 1492 aa25.73■■□□□ 1.71
SCAMP1-203ENST00000510030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
SCAMP1-203ENST00000510030 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
SCAMP1-203ENST00000510030 DIP2BQ9P265 1576 aa25.73■■□□□ 1.71
SCAMP1-203ENST00000510030 ATP10BO94823 1461 aa25.72■■□□□ 1.71
SCAMP1-203ENST00000510030 KANK4Q5T7N3 995 aaPredicted RBP25.72■■□□□ 1.71
SCAMP1-203ENST00000510030 MAPKBP1O60336 1514 aa25.72■■□□□ 1.71
SCAMP1-203ENST00000510030 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
SCAMP1-203ENST00000510030 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
SCAMP1-203ENST00000510030 NPM1P06748 294 aaKnown RBP eCLIP25.69■■□□□ 1.7
SCAMP1-203ENST00000510030 TROQ12816 1431 aaPredicted RBP25.69■■□□□ 1.7
SCAMP1-203ENST00000510030 ZCCHC11Q5TAX3 1644 aaKnown RBP25.68■■□□□ 1.7
SCAMP1-203ENST00000510030 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
SCAMP1-203ENST00000510030 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
SCAMP1-203ENST00000510030 MAGI3Q5TCQ9 1506 aa25.65■■□□□ 1.7
SCAMP1-203ENST00000510030 KIF14Q15058 1648 aa25.63■■□□□ 1.69
SCAMP1-203ENST00000510030 NCOA2Q15596 1464 aa25.62■■□□□ 1.69
SCAMP1-203ENST00000510030 ARID3CA6NKF2 412 aa25.61■■□□□ 1.69
SCAMP1-203ENST00000510030 TSPOAP1O95153 1857 aa25.59■■□□□ 1.69
SCAMP1-203ENST00000510030 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
SCAMP1-203ENST00000510030 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
SCAMP1-203ENST00000510030 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
SCAMP1-203ENST00000510030 PHLDB1Q86UU1 1377 aa25.51■■□□□ 1.67
SCAMP1-203ENST00000510030 WDR7Q9Y4E6 1490 aa25.51■■□□□ 1.67
SCAMP1-203ENST00000510030 KDM6BO15054 1643 aa25.49■■□□□ 1.67
SCAMP1-203ENST00000510030 ASXL2Q76L83 1435 aa25.49■■□□□ 1.67
SCAMP1-203ENST00000510030 MIA2Q96PC5 1412 aa25.49■■□□□ 1.67
SCAMP1-203ENST00000510030 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
SCAMP1-203ENST00000510030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.47■■□□□ 1.67
SCAMP1-203ENST00000510030 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
SCAMP1-203ENST00000510030 PPRC1Q5VV67 1664 aaKnown RBP25.42■■□□□ 1.66
SCAMP1-203ENST00000510030 PCGF6Q9BYE7 350 aa25.42■■□□□ 1.66
SCAMP1-203ENST00000510030 MYO5CQ9NQX4 1742 aa25.39■■□□□ 1.65
SCAMP1-203ENST00000510030 PREX2Q70Z35 1606 aa25.38■■□□□ 1.65
SCAMP1-203ENST00000510030 PTPN23Q9H3S7 1636 aa25.38■■□□□ 1.65
SCAMP1-203ENST00000510030 CDC42BPAQ5VT25 1732 aa25.38■■□□□ 1.65
SCAMP1-203ENST00000510030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms