RNA–Protein interactions for RNA: ENST00000509581.5

PDCD6-207, Transcript of programmed cell death 6, humanhuman

TSL 1 (best) BASIC

Gene PDCD6, Length 1,156 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-207ENST00000509581 RIMBP3CA6NJZ7 1639 aa29.83■■■□□ 2.37
PDCD6-207ENST00000509581 RIMBP3BA6NNM3 1639 aa29.83■■■□□ 2.37
PDCD6-207ENST00000509581 RIMBP3Q9UFD9 1639 aa29.83■■■□□ 2.37
PDCD6-207ENST00000509581 SHROOM2Q13796 1616 aa29.82■■■□□ 2.36
PDCD6-207ENST00000509581 CTTNBP2Q8WZ74 1663 aa29.8■■■□□ 2.36
PDCD6-207ENST00000509581 KIF21BO75037 1637 aa29.78■■■□□ 2.36
PDCD6-207ENST00000509581 IQGAP2Q13576 1575 aa29.76■■■□□ 2.35
PDCD6-207ENST00000509581 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
PDCD6-207ENST00000509581 PRG4Q92954 1404 aaPredicted RBP29.64■■■□□ 2.34
PDCD6-207ENST00000509581 GOLGA3Q08378 1498 aa29.61■■■□□ 2.33
PDCD6-207ENST00000509581 CARMIL2Q6F5E8 1435 aa29.58■■■□□ 2.33
PDCD6-207ENST00000509581 ARAP1Q96P48 1450 aa29.58■■■□□ 2.33
PDCD6-207ENST00000509581 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
PDCD6-207ENST00000509581 UGGT2Q9NYU1 1516 aa29.56■■■□□ 2.32
PDCD6-207ENST00000509581 CYB5RLQ6IPT4 315 aa29.5■■■□□ 2.31
PDCD6-207ENST00000509581 UBTFP17480 764 aaKnown RBP29.47■■■□□ 2.31
PDCD6-207ENST00000509581 KIAA0556O60303 1618 aa29.45■■■□□ 2.3
PDCD6-207ENST00000509581 DISP1Q96F81 1524 aa29.43■■■□□ 2.3
PDCD6-207ENST00000509581 TNIKQ9UKE5 1360 aa29.4■■■□□ 2.3
PDCD6-207ENST00000509581 EHMT2Q96KQ7 1210 aa29.4■■■□□ 2.3
PDCD6-207ENST00000509581 PTPRGP23470 1445 aa29.35■■■□□ 2.29
PDCD6-207ENST00000509581 SAMD9Q5K651 1589 aa29.34■■■□□ 2.29
PDCD6-207ENST00000509581 EFCAB5A4FU69 1503 aa29.32■■■□□ 2.28
PDCD6-207ENST00000509581 RANGAP1P46060 587 aaPredicted RBP29.24■■■□□ 2.27
PDCD6-207ENST00000509581 TTBK1Q5TCY1 1321 aaPredicted RBP29.23■■■□□ 2.27
PDCD6-207ENST00000509581 ADCY10Q96PN6 1610 aa29.18■■■□□ 2.26
PDCD6-207ENST00000509581 UACAQ9BZF9 1416 aa29.17■■■□□ 2.26
PDCD6-207ENST00000509581 P3H3Q8IVL6 736 aa29.16■■■□□ 2.26
PDCD6-207ENST00000509581 NPM1P06748 294 aaKnown RBP eCLIP29.15■■■□□ 2.26
PDCD6-207ENST00000509581 UHRF1BP1LA0JNW5 1464 aa29.14■■■□□ 2.26
PDCD6-207ENST00000509581 ABCC2Q92887 1545 aa29.13■■■□□ 2.25
PDCD6-207ENST00000509581 FHOD3Q2V2M9 1422 aa29.11■■■□□ 2.25
PDCD6-207ENST00000509581 ARHGAP35Q9NRY4 1499 aa29.09■■■□□ 2.25
PDCD6-207ENST00000509581 ABCA8O94911 1581 aa29.08■■■□□ 2.25
PDCD6-207ENST00000509581 PLB1Q6P1J6 1458 aa29.05■■■□□ 2.24
PDCD6-207ENST00000509581 CLIP1P30622 1438 aa29.04■■■□□ 2.24
PDCD6-207ENST00000509581 RAPGEF6Q8TEU7 1601 aa29.04■■■□□ 2.24
PDCD6-207ENST00000509581 FMN1Q68DA7 1419 aa29.03■■■□□ 2.24
PDCD6-207ENST00000509581 LOC105371045A0A1W2PR82 267 aa29■■■□□ 2.23
PDCD6-207ENST00000509581 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
PDCD6-207ENST00000509581 KDM5BQ9UGL1 1544 aa28.98■■■□□ 2.23
PDCD6-207ENST00000509581 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
PDCD6-207ENST00000509581 ZCCHC11Q5TAX3 1644 aaKnown RBP28.96■■■□□ 2.23
PDCD6-207ENST00000509581 HECW1Q76N89 1606 aa28.89■■■□□ 2.22
PDCD6-207ENST00000509581 TRHP20396 242 aaPredicted RBP28.87■■■□□ 2.21
PDCD6-207ENST00000509581 NUP153P49790 1475 aaKnown RBP28.84■■■□□ 2.21
PDCD6-207ENST00000509581 ASXL2Q76L83 1435 aa28.83■■■□□ 2.21
PDCD6-207ENST00000509581 ATP10BO94823 1461 aa28.8■■■□□ 2.2
PDCD6-207ENST00000509581 KIF13AQ9H1H9 1805 aa28.79■■■□□ 2.2
PDCD6-207ENST00000509581 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
PDCD6-207ENST00000509581 PCF11O94913 1555 aaKnown RBP28.77■■■□□ 2.2
PDCD6-207ENST00000509581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.77■■■□□ 2.2
PDCD6-207ENST00000509581 HNRNPUL2Q1KMD3 747 aaKnown RBP28.77■■■□□ 2.2
PDCD6-207ENST00000509581 CASKIN1Q8WXD9 1431 aa28.77■■■□□ 2.2
PDCD6-207ENST00000509581 DIP2BQ9P265 1576 aa28.76■■■□□ 2.19
PDCD6-207ENST00000509581 ATP1B4Q9UN42 357 aaPredicted RBP28.76■■■□□ 2.19
PDCD6-207ENST00000509581 FYCO1Q9BQS8 1478 aa28.76■■■□□ 2.19
PDCD6-207ENST00000509581 WDR7Q9Y4E6 1490 aa28.76■■■□□ 2.19
PDCD6-207ENST00000509581 ARID3CA6NKF2 412 aa28.74■■■□□ 2.19
PDCD6-207ENST00000509581 EPRSP07814 1512 aaKnown RBP28.71■■■□□ 2.19
PDCD6-207ENST00000509581 CCDC18Q5T9S5 1454 aa28.71■■■□□ 2.19
PDCD6-207ENST00000509581 GLI2P10070 1586 aa28.68■■■□□ 2.18
PDCD6-207ENST00000509581 FAM69CQ0P6D2 419 aa28.68■■■□□ 2.18
PDCD6-207ENST00000509581 LRRIQ1Q96JM4 1722 aa28.66■■■□□ 2.18
PDCD6-207ENST00000509581 CDK13Q14004 1512 aaKnown RBP28.66■■■□□ 2.18
PDCD6-207ENST00000509581 CDK11AQ9UQ88 783 aaPredicted RBP28.66■■■□□ 2.18
PDCD6-207ENST00000509581 PLEKHD1A6NEE1 506 aa28.65■■■□□ 2.18
PDCD6-207ENST00000509581 VPS8Q8N3P4 1428 aa28.63■■■□□ 2.17
PDCD6-207ENST00000509581 CFAP43Q8NDM7 1665 aa28.59■■■□□ 2.17
PDCD6-207ENST00000509581 KCNH8Q96L42 1107 aa28.58■■■□□ 2.17
PDCD6-207ENST00000509581 TSPOAP1O95153 1857 aa28.57■■■□□ 2.16
PDCD6-207ENST00000509581 MAP3K4Q9Y6R4 1608 aa28.56■■■□□ 2.16
PDCD6-207ENST00000509581 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
PDCD6-207ENST00000509581 TROQ12816 1431 aaPredicted RBP28.49■■■□□ 2.15
PDCD6-207ENST00000509581 KIF14Q15058 1648 aa28.48■■■□□ 2.15
PDCD6-207ENST00000509581 TEX14Q8IWB6 1497 aa28.46■■■□□ 2.15
PDCD6-207ENST00000509581 CD109Q6YHK3 1445 aa28.45■■■□□ 2.15
PDCD6-207ENST00000509581 PPRC1Q5VV67 1664 aaKnown RBP28.42■■■□□ 2.14
PDCD6-207ENST00000509581 TIAM1Q13009 1591 aa28.41■■■□□ 2.14
PDCD6-207ENST00000509581 MAGI3Q5TCQ9 1506 aa28.4■■■□□ 2.14
PDCD6-207ENST00000509581 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.4■■■□□ 2.14
PDCD6-207ENST00000509581 MTUS2Q5JR59 1369 aa28.39■■■□□ 2.14
PDCD6-207ENST00000509581 MAP3K1Q13233 1512 aa28.39■■■□□ 2.14
PDCD6-207ENST00000509581 APLP2Q06481 763 aa28.39■■■□□ 2.14
PDCD6-207ENST00000509581 EHBP1L1Q8N3D4 1523 aa28.38■■■□□ 2.13
PDCD6-207ENST00000509581 MYO5CQ9NQX4 1742 aa28.37■■■□□ 2.13
PDCD6-207ENST00000509581 TTC37Q6PGP7 1564 aa28.37■■■□□ 2.13
PDCD6-207ENST00000509581 CFAP74Q9C0B2 1584 aa28.33■■■□□ 2.12
PDCD6-207ENST00000509581 SUPT6HQ7KZ85 1726 aaKnown RBP28.29■■■□□ 2.12
PDCD6-207ENST00000509581 KDM6BO15054 1643 aa28.29■■■□□ 2.12
PDCD6-207ENST00000509581 ARAP3Q8WWN8 1544 aa28.28■■■□□ 2.12
PDCD6-207ENST00000509581 PHLDB1Q86UU1 1377 aa28.27■■■□□ 2.12
PDCD6-207ENST00000509581 NEO1Q92859 1461 aa28.26■■■□□ 2.11
PDCD6-207ENST00000509581 LRRC9Q6ZRR7 1453 aa28.24■■■□□ 2.11
PDCD6-207ENST00000509581 PLCH2O75038 1416 aa28.24■■■□□ 2.11
PDCD6-207ENST00000509581 PREX2Q70Z35 1606 aa28.22■■■□□ 2.11
PDCD6-207ENST00000509581 FANCAO15360 1455 aa28.21■■■□□ 2.11
PDCD6-207ENST00000509581 CDC42BPAQ5VT25 1732 aa28.21■■■□□ 2.11
PDCD6-207ENST00000509581 ITSN2Q9NZM3 1697 aa28.2■■■□□ 2.11
PDCD6-207ENST00000509581 ARHGAP5Q13017 1502 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms