RNA–Protein interactions for RNA: ENST00000509242.5

ESRRB-204, Transcript of estrogen related receptor beta, humanhuman

TSL 1 (best) BASIC

Gene ESRRB, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-204ENST00000509242 CFAP43Q8NDM7 1665 aa19.31■□□□□ 0.68
ESRRB-204ENST00000509242 RAB3GAP2Q9H2M9 1393 aa19.3■□□□□ 0.68
ESRRB-204ENST00000509242 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
ESRRB-204ENST00000509242 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
ESRRB-204ENST00000509242 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
ESRRB-204ENST00000509242 ITGAEP38570 1179 aa19.27■□□□□ 0.68
ESRRB-204ENST00000509242 PCF11O94913 1555 aaKnown RBP19.27■□□□□ 0.68
ESRRB-204ENST00000509242 PHLDB1Q86UU1 1377 aa19.27■□□□□ 0.68
ESRRB-204ENST00000509242 EFCAB5A4FU69 1503 aa19.26■□□□□ 0.67
ESRRB-204ENST00000509242 CUL7Q14999 1698 aa19.26■□□□□ 0.67
ESRRB-204ENST00000509242 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
ESRRB-204ENST00000509242 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
ESRRB-204ENST00000509242 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.677e-7■■■■■ 29.1
ESRRB-204ENST00000509242 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
ESRRB-204ENST00000509242 CTTNBP2Q8WZ74 1663 aa19.21■□□□□ 0.67
ESRRB-204ENST00000509242 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
ESRRB-204ENST00000509242 NESP48681 1621 aa19.2■□□□□ 0.66
ESRRB-204ENST00000509242 FHOD3Q2V2M9 1422 aa19.19■□□□□ 0.66
ESRRB-204ENST00000509242 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
ESRRB-204ENST00000509242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.18■□□□□ 0.669e-7■■■■■ 85.9
ESRRB-204ENST00000509242 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
ESRRB-204ENST00000509242 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
ESRRB-204ENST00000509242 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
ESRRB-204ENST00000509242 FMN1Q68DA7 1419 aa19.12■□□□□ 0.65
ESRRB-204ENST00000509242 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
ESRRB-204ENST00000509242 MYT1Q01538 1121 aa19.1■□□□□ 0.65
ESRRB-204ENST00000509242 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
ESRRB-204ENST00000509242 TIMELESSQ9UNS1 1208 aa19.1■□□□□ 0.65
ESRRB-204ENST00000509242 ABCA5Q8WWZ7 1642 aa19.09■□□□□ 0.65
ESRRB-204ENST00000509242 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
ESRRB-204ENST00000509242 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
ESRRB-204ENST00000509242 FGD6Q6ZV73 1430 aa19.04■□□□□ 0.64
ESRRB-204ENST00000509242 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
ESRRB-204ENST00000509242 SIN3AQ96ST3 1273 aa19.03■□□□□ 0.64
ESRRB-204ENST00000509242 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
ESRRB-204ENST00000509242 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
ESRRB-204ENST00000509242 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
ESRRB-204ENST00000509242 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
ESRRB-204ENST00000509242 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
ESRRB-204ENST00000509242 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
ESRRB-204ENST00000509242 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
ESRRB-204ENST00000509242 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
ESRRB-204ENST00000509242 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
ESRRB-204ENST00000509242 KIF21AQ7Z4S6 1674 aa18.93■□□□□ 0.62
ESRRB-204ENST00000509242 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
ESRRB-204ENST00000509242 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
ESRRB-204ENST00000509242 PTPRKQ15262 1439 aa18.92■□□□□ 0.62
ESRRB-204ENST00000509242 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
ESRRB-204ENST00000509242 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
ESRRB-204ENST00000509242 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
ESRRB-204ENST00000509242 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
ESRRB-204ENST00000509242 PTPN23Q9H3S7 1636 aa18.91■□□□□ 0.62
ESRRB-204ENST00000509242 UACAQ9BZF9 1416 aa18.9■□□□□ 0.62
ESRRB-204ENST00000509242 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
ESRRB-204ENST00000509242 NAIPQ13075 1403 aa18.87■□□□□ 0.61
ESRRB-204ENST00000509242 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
ESRRB-204ENST00000509242 SUPT16HQ9Y5B9 1047 aaKnown RBP18.87■□□□□ 0.61
ESRRB-204ENST00000509242 UGGT2Q9NYU1 1516 aa18.86■□□□□ 0.61
ESRRB-204ENST00000509242 KCNH8Q96L42 1107 aa18.84■□□□□ 0.61
ESRRB-204ENST00000509242 PBRM1Q86U86 1689 aa18.83■□□□□ 0.6
ESRRB-204ENST00000509242 MAGI3Q5TCQ9 1506 aa18.82■□□□□ 0.6
ESRRB-204ENST00000509242 TONSLQ96HA7 1378 aa18.82■□□□□ 0.6
ESRRB-204ENST00000509242 TCOF1Q13428 1488 aaKnown RBP18.81■□□□□ 0.6
ESRRB-204ENST00000509242 HECW1Q76N89 1606 aa18.8■□□□□ 0.6
ESRRB-204ENST00000509242 IQGAP2Q13576 1575 aa18.79■□□□□ 0.6
ESRRB-204ENST00000509242 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
ESRRB-204ENST00000509242 CCER2I3L3R5 266 aa18.76■□□□□ 0.59
ESRRB-204ENST00000509242 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
ESRRB-204ENST00000509242 GCC2Q8IWJ2 1684 aa18.75■□□□□ 0.59
ESRRB-204ENST00000509242 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
ESRRB-204ENST00000509242 HIRIP3Q9BW71 556 aaPredicted RBP18.73■□□□□ 0.59
ESRRB-204ENST00000509242 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
ESRRB-204ENST00000509242 MIA2Q96PC5 1412 aa18.73■□□□□ 0.59
ESRRB-204ENST00000509242 ANP32CO43423 234 aa18.71■□□□□ 0.59
ESRRB-204ENST00000509242 MRC2Q9UBG0 1479 aa18.71■□□□□ 0.59
ESRRB-204ENST00000509242 WDR62O43379 1518 aa18.7■□□□□ 0.58
ESRRB-204ENST00000509242 DENND4BO75064 1496 aaPredicted RBP18.67■□□□□ 0.58
ESRRB-204ENST00000509242 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
ESRRB-204ENST00000509242 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
ESRRB-204ENST00000509242 CHIC2Q9UKJ5 165 aa18.64■□□□□ 0.57
ESRRB-204ENST00000509242 KDM6BO15054 1643 aa18.63■□□□□ 0.57
ESRRB-204ENST00000509242 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
ESRRB-204ENST00000509242 KIAA0586Q9BVV6 1533 aa18.61■□□□□ 0.57
ESRRB-204ENST00000509242 ROCK1Q13464 1354 aa18.59■□□□□ 0.57
ESRRB-204ENST00000509242 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
ESRRB-204ENST00000509242 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
ESRRB-204ENST00000509242 KIAA0556O60303 1618 aa18.58■□□□□ 0.57
ESRRB-204ENST00000509242 DISP1Q96F81 1524 aa18.58■□□□□ 0.57
ESRRB-204ENST00000509242 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
ESRRB-204ENST00000509242 DAPK1P53355 1430 aa18.55■□□□□ 0.56
ESRRB-204ENST00000509242 DNMT1P26358 1616 aaKnown RBP18.55■□□□□ 0.56
ESRRB-204ENST00000509242 NUP153P49790 1475 aaKnown RBP18.54■□□□□ 0.56
ESRRB-204ENST00000509242 TSHZ2Q9NRE2 1034 aa18.54■□□□□ 0.56
ESRRB-204ENST00000509242 HSPA5P11021 654 aaKnown RBP18.53■□□□□ 0.56
ESRRB-204ENST00000509242 RAPGEF6Q8TEU7 1601 aa18.53■□□□□ 0.56
ESRRB-204ENST00000509242 FKBP8Q14318 412 aa18.53■□□□□ 0.56
ESRRB-204ENST00000509242 ABCC5O15440 1437 aa18.52■□□□□ 0.56
ESRRB-204ENST00000509242 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
ESRRB-204ENST00000509242 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
ESRRB-204ENST00000509242 ARID3CA6NKF2 412 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms