RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
PDGFRA-205ENST00000507536 GRIN2BQ13224 1484 aa18.91■□□□□ 0.62
PDGFRA-205ENST00000507536 SYNJ2O15056 1496 aa18.88■□□□□ 0.61
PDGFRA-205ENST00000507536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDGFRA-205ENST00000507536 ABCA10Q8WWZ4 1543 aa18.86■□□□□ 0.61
PDGFRA-205ENST00000507536 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
PDGFRA-205ENST00000507536 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
PDGFRA-205ENST00000507536 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
PDGFRA-205ENST00000507536 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
PDGFRA-205ENST00000507536 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
PDGFRA-205ENST00000507536 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
PDGFRA-205ENST00000507536 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
PDGFRA-205ENST00000507536 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
PDGFRA-205ENST00000507536 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
PDGFRA-205ENST00000507536 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
PDGFRA-205ENST00000507536 SLC4A2P04920 1241 aa18.69■□□□□ 0.58
PDGFRA-205ENST00000507536 SHROOM2Q13796 1616 aa18.69■□□□□ 0.58
PDGFRA-205ENST00000507536 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
PDGFRA-205ENST00000507536 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
PDGFRA-205ENST00000507536 NUP160Q12769 1436 aa18.66■□□□□ 0.58
PDGFRA-205ENST00000507536 C1QBPQ07021 282 aaKnown RBP18.65■□□□□ 0.58
PDGFRA-205ENST00000507536 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
PDGFRA-205ENST00000507536 ERICH3Q5RHP9 1530 aa18.63■□□□□ 0.57
PDGFRA-205ENST00000507536 U3KPZ7 1027 aaPredicted RBP18.59■□□□□ 0.57
PDGFRA-205ENST00000507536 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.57
PDGFRA-205ENST00000507536 KIF13AQ9H1H9 1805 aa18.53■□□□□ 0.56
PDGFRA-205ENST00000507536 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
PDGFRA-205ENST00000507536 PRG4Q92954 1404 aaPredicted RBP18.41■□□□□ 0.54
PDGFRA-205ENST00000507536 CUL7Q14999 1698 aa18.4■□□□□ 0.54
PDGFRA-205ENST00000507536 ADCY10Q96PN6 1610 aa18.37■□□□□ 0.53
PDGFRA-205ENST00000507536 JPH4Q96JJ6 628 aa18.33■□□□□ 0.52
PDGFRA-205ENST00000507536 MAPKBP1O60336 1514 aa18.3■□□□□ 0.52
PDGFRA-205ENST00000507536 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
PDGFRA-205ENST00000507536 IGF1RP08069 1367 aa18.3■□□□□ 0.52
PDGFRA-205ENST00000507536 KIAA0586Q9BVV6 1533 aa18.29■□□□□ 0.52
PDGFRA-205ENST00000507536 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
PDGFRA-205ENST00000507536 ABCC10Q5T3U5 1492 aa18.25■□□□□ 0.51
PDGFRA-205ENST00000507536 TSPOAP1O95153 1857 aa18.22■□□□□ 0.51
PDGFRA-205ENST00000507536 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
PDGFRA-205ENST00000507536 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
PDGFRA-205ENST00000507536 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
PDGFRA-205ENST00000507536 ZBTB22O15209 634 aa18.16■□□□□ 0.5
PDGFRA-205ENST00000507536 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
PDGFRA-205ENST00000507536 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
PDGFRA-205ENST00000507536 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
PDGFRA-205ENST00000507536 FAM69CQ0P6D2 419 aa18.11■□□□□ 0.49
PDGFRA-205ENST00000507536 KDM6BO15054 1643 aa18.11■□□□□ 0.49
PDGFRA-205ENST00000507536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
PDGFRA-205ENST00000507536 CAPN15O75808 1086 aa18.09■□□□□ 0.49
PDGFRA-205ENST00000507536 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
PDGFRA-205ENST00000507536 DISP1Q96F81 1524 aa18.08■□□□□ 0.49
PDGFRA-205ENST00000507536 ABCC2Q92887 1545 aa18.08■□□□□ 0.48
PDGFRA-205ENST00000507536 PTPRGP23470 1445 aa18.07■□□□□ 0.48
PDGFRA-205ENST00000507536 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDGFRA-205ENST00000507536 CTTNBP2Q8WZ74 1663 aa18.06■□□□□ 0.48
PDGFRA-205ENST00000507536 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
PDGFRA-205ENST00000507536 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
PDGFRA-205ENST00000507536 UHRF1BP1LA0JNW5 1464 aa18.04■□□□□ 0.48
PDGFRA-205ENST00000507536 SAMD1Q6SPF0 538 aaPredicted RBP18.04■□□□□ 0.48
PDGFRA-205ENST00000507536 CARMIL2Q6F5E8 1435 aa18.04■□□□□ 0.48
PDGFRA-205ENST00000507536 GLI2P10070 1586 aa18.04■□□□□ 0.48
PDGFRA-205ENST00000507536 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
PDGFRA-205ENST00000507536 ZCCHC11Q5TAX3 1644 aaKnown RBP18.01■□□□□ 0.47
PDGFRA-205ENST00000507536 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
PDGFRA-205ENST00000507536 MAP3K4Q9Y6R4 1608 aa18■□□□□ 0.47
PDGFRA-205ENST00000507536 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
PDGFRA-205ENST00000507536 APLP2Q06481 763 aa17.98■□□□□ 0.47
PDGFRA-205ENST00000507536 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
PDGFRA-205ENST00000507536 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
PDGFRA-205ENST00000507536 PLB1Q6P1J6 1458 aa17.96■□□□□ 0.47
PDGFRA-205ENST00000507536 TTBK1Q5TCY1 1321 aaPredicted RBP17.96■□□□□ 0.46
PDGFRA-205ENST00000507536 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
PDGFRA-205ENST00000507536 DSG3P32926 999 aa17.9■□□□□ 0.46
PDGFRA-205ENST00000507536 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
PDGFRA-205ENST00000507536 COL17A1Q9UMD9 1497 aaPredicted RBP17.87■□□□□ 0.45
PDGFRA-205ENST00000507536 ABCA8O94911 1581 aa17.87■□□□□ 0.45
PDGFRA-205ENST00000507536 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
PDGFRA-205ENST00000507536 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
PDGFRA-205ENST00000507536 CFAP43Q8NDM7 1665 aa17.83■□□□□ 0.44
PDGFRA-205ENST00000507536 WDR7Q9Y4E6 1490 aa17.82■□□□□ 0.44
PDGFRA-205ENST00000507536 TEX14Q8IWB6 1497 aa17.8■□□□□ 0.44
PDGFRA-205ENST00000507536 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
PDGFRA-205ENST00000507536 ADGRL1O94910 1474 aa17.77■□□□□ 0.44
PDGFRA-205ENST00000507536 ATF5Q9Y2D1 282 aaPredicted RBP17.77■□□□□ 0.44
PDGFRA-205ENST00000507536 ABCB7O75027 752 aa17.75■□□□□ 0.43
PDGFRA-205ENST00000507536 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
PDGFRA-205ENST00000507536 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
PDGFRA-205ENST00000507536 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
PDGFRA-205ENST00000507536 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
PDGFRA-205ENST00000507536 CD109Q6YHK3 1445 aa17.67■□□□□ 0.42
PDGFRA-205ENST00000507536 ABCA9Q8IUA7 1624 aa17.67■□□□□ 0.42
PDGFRA-205ENST00000507536 KIF21BO75037 1637 aa17.66■□□□□ 0.42
PDGFRA-205ENST00000507536 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
PDGFRA-205ENST00000507536 ATP10BO94823 1461 aa17.64■□□□□ 0.41
PDGFRA-205ENST00000507536 HECW2Q9P2P5 1572 aa17.62■□□□□ 0.41
PDGFRA-205ENST00000507536 ARAP3Q8WWN8 1544 aa17.6■□□□□ 0.41
PDGFRA-205ENST00000507536 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
PDGFRA-205ENST00000507536 FRMPD1Q5SYB0 1578 aa17.57■□□□□ 0.4
PDGFRA-205ENST00000507536 ATXN8OSP0DMR3 200 aa17.56■□□□□ 0.4
PDGFRA-205ENST00000507536 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms