RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
RPS3A-206ENST00000507485 ARHGEF11O15085 1522 aa16.66■□□□□ 0.26
RPS3A-206ENST00000507485 CHD1O14646 1710 aa16.65■□□□□ 0.26
RPS3A-206ENST00000507485 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
RPS3A-206ENST00000507485 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
RPS3A-206ENST00000507485 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
RPS3A-206ENST00000507485 CUX1P39880 1505 aa16.57■□□□□ 0.24
RPS3A-206ENST00000507485 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
RPS3A-206ENST00000507485 POLA2Q14181 598 aa16.56■□□□□ 0.24
RPS3A-206ENST00000507485 SOGA1O94964 1423 aa16.56■□□□□ 0.24
RPS3A-206ENST00000507485 ARAP1Q96P48 1450 aa16.52■□□□□ 0.24
RPS3A-206ENST00000507485 FBLN2P98095 1184 aa16.52■□□□□ 0.24
RPS3A-206ENST00000507485 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
RPS3A-206ENST00000507485 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
RPS3A-206ENST00000507485 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
RPS3A-206ENST00000507485 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
RPS3A-206ENST00000507485 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
RPS3A-206ENST00000507485 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
RPS3A-206ENST00000507485 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
RPS3A-206ENST00000507485 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
RPS3A-206ENST00000507485 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
RPS3A-206ENST00000507485 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
RPS3A-206ENST00000507485 SYNJ1O43426 1573 aa16.37■□□□□ 0.21
RPS3A-206ENST00000507485 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
RPS3A-206ENST00000507485 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
RPS3A-206ENST00000507485 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
RPS3A-206ENST00000507485 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
RPS3A-206ENST00000507485 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
RPS3A-206ENST00000507485 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
RPS3A-206ENST00000507485 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
RPS3A-206ENST00000507485 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
RPS3A-206ENST00000507485 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.19
RPS3A-206ENST00000507485 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
RPS3A-206ENST00000507485 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
RPS3A-206ENST00000507485 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
RPS3A-206ENST00000507485 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
RPS3A-206ENST00000507485 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
RPS3A-206ENST00000507485 CEP170Q5SW79 1584 aa16.22■□□□□ 0.19
RPS3A-206ENST00000507485 NUP160Q12769 1436 aa16.19■□□□□ 0.18
RPS3A-206ENST00000507485 ATF5Q9Y2D1 282 aaPredicted RBP16.17■□□□□ 0.18
RPS3A-206ENST00000507485 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
RPS3A-206ENST00000507485 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
RPS3A-206ENST00000507485 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
RPS3A-206ENST00000507485 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
RPS3A-206ENST00000507485 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
RPS3A-206ENST00000507485 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.16
RPS3A-206ENST00000507485 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
RPS3A-206ENST00000507485 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
RPS3A-206ENST00000507485 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
RPS3A-206ENST00000507485 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.15
RPS3A-206ENST00000507485 IGF1RP08069 1367 aa15.94■□□□□ 0.14
RPS3A-206ENST00000507485 PITPNM1O00562 1244 aa15.89■□□□□ 0.13
RPS3A-206ENST00000507485 ADCY10Q96PN6 1610 aa15.89■□□□□ 0.13
RPS3A-206ENST00000507485 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
RPS3A-206ENST00000507485 KIAA0586Q9BVV6 1533 aa15.88■□□□□ 0.13
RPS3A-206ENST00000507485 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
RPS3A-206ENST00000507485 CUL7Q14999 1698 aa15.87■□□□□ 0.13
RPS3A-206ENST00000507485 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
RPS3A-206ENST00000507485 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.13
RPS3A-206ENST00000507485 MAPKBP1O60336 1514 aa15.83■□□□□ 0.13
RPS3A-206ENST00000507485 HAX1O00165 279 aa15.83■□□□□ 0.12
RPS3A-206ENST00000507485 ZBTB22O15209 634 aa15.83■□□□□ 0.12
RPS3A-206ENST00000507485 DIP2BQ9P265 1576 aa15.82■□□□□ 0.12
RPS3A-206ENST00000507485 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
RPS3A-206ENST00000507485 FAM69CQ0P6D2 419 aa15.79■□□□□ 0.12
RPS3A-206ENST00000507485 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
RPS3A-206ENST00000507485 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
RPS3A-206ENST00000507485 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
RPS3A-206ENST00000507485 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
RPS3A-206ENST00000507485 PTPRGP23470 1445 aa15.73■□□□□ 0.11
RPS3A-206ENST00000507485 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
RPS3A-206ENST00000507485 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
RPS3A-206ENST00000507485 DISP1Q96F81 1524 aa15.71■□□□□ 0.1
RPS3A-206ENST00000507485 TSPOAP1O95153 1857 aa15.7■□□□□ 0.1
RPS3A-206ENST00000507485 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
RPS3A-206ENST00000507485 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
RPS3A-206ENST00000507485 KDM6BO15054 1643 aa15.67■□□□□ 0.1
RPS3A-206ENST00000507485 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
RPS3A-206ENST00000507485 PPRC1Q5VV67 1664 aaKnown RBP15.65■□□□□ 0.1
RPS3A-206ENST00000507485 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
RPS3A-206ENST00000507485 ASXL2Q76L83 1435 aa15.64■□□□□ 0.09
RPS3A-206ENST00000507485 UHRF1BP1LA0JNW5 1464 aa15.64■□□□□ 0.09
RPS3A-206ENST00000507485 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
RPS3A-206ENST00000507485 UACAQ9BZF9 1416 aa15.62■□□□□ 0.09
RPS3A-206ENST00000507485 KIAA0556O60303 1618 aa15.61■□□□□ 0.09
RPS3A-206ENST00000507485 GLI2P10070 1586 aa15.6■□□□□ 0.09
RPS3A-206ENST00000507485 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
RPS3A-206ENST00000507485 KDM5BQ9UGL1 1544 aa15.59■□□□□ 0.09
RPS3A-206ENST00000507485 KDM4FA0A1W2PPD8 638 aa15.58■□□□□ 0.09
RPS3A-206ENST00000507485 ZCCHC11Q5TAX3 1644 aaKnown RBP15.57■□□□□ 0.08
RPS3A-206ENST00000507485 EPRSP07814 1512 aaKnown RBP15.55■□□□□ 0.08
RPS3A-206ENST00000507485 COL17A1Q9UMD9 1497 aaPredicted RBP15.55■□□□□ 0.08
RPS3A-206ENST00000507485 SPDYE1Q8NFV5 336 aaPredicted RBP15.55■□□□□ 0.08
RPS3A-206ENST00000507485 CTTNBP2Q8WZ74 1663 aa15.55■□□□□ 0.08
RPS3A-206ENST00000507485 EVX2Q03828 476 aa15.53■□□□□ 0.08
RPS3A-206ENST00000507485 MAP3K4Q9Y6R4 1608 aa15.53■□□□□ 0.08
RPS3A-206ENST00000507485 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
RPS3A-206ENST00000507485 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
RPS3A-206ENST00000507485 ABCA8O94911 1581 aa15.49■□□□□ 0.07
RPS3A-206ENST00000507485 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms