RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PBRM1Q86U86 1689 aa10.55□□□□□ -0.72
GYPB-208ENST00000507009 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
GYPB-208ENST00000507009 WDR97A6NE52 1622 aa10.54□□□□□ -0.72
GYPB-208ENST00000507009 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
GYPB-208ENST00000507009 GAPVD1Q14C86 1478 aa10.51□□□□□ -0.73
GYPB-208ENST00000507009 C1QBPQ07021 282 aaKnown RBP10.49□□□□□ -0.73
GYPB-208ENST00000507009 ERCC6L2Q5T890 1561 aa10.46□□□□□ -0.74
GYPB-208ENST00000507009 ABCA5Q8WWZ7 1642 aa10.45□□□□□ -0.74
GYPB-208ENST00000507009 SUPT5HO00267 1087 aaKnown RBP10.45□□□□□ -0.74
GYPB-208ENST00000507009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.74
GYPB-208ENST00000507009 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
GYPB-208ENST00000507009 GRIN2AQ12879 1464 aa10.42□□□□□ -0.74
GYPB-208ENST00000507009 CEP170Q5SW79 1584 aa10.41□□□□□ -0.74
GYPB-208ENST00000507009 KCNA4P22459 653 aa10.41□□□□□ -0.74
GYPB-208ENST00000507009 ADAMTS12P58397 1594 aa10.4□□□□□ -0.74
GYPB-208ENST00000507009 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
GYPB-208ENST00000507009 FHAD1B1AJZ9 1412 aa10.35□□□□□ -0.75
GYPB-208ENST00000507009 NUP160Q12769 1436 aa10.35□□□□□ -0.75
GYPB-208ENST00000507009 KIF13AQ9H1H9 1805 aa10.35□□□□□ -0.75
GYPB-208ENST00000507009 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
GYPB-208ENST00000507009 BIVM-ERCC5R4GMW8 1640 aa10.34□□□□□ -0.75
GYPB-208ENST00000507009 TOP2BQ02880 1626 aa10.33□□□□□ -0.76
GYPB-208ENST00000507009 PRG4Q92954 1404 aaPredicted RBP10.33□□□□□ -0.76
GYPB-208ENST00000507009 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
GYPB-208ENST00000507009 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
GYPB-208ENST00000507009 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
GYPB-208ENST00000507009 JPH4Q96JJ6 628 aa10.29□□□□□ -0.76
GYPB-208ENST00000507009 TTBK1Q5TCY1 1321 aaPredicted RBP10.28□□□□□ -0.76
GYPB-208ENST00000507009 TSPOAP1O95153 1857 aa10.26□□□□□ -0.77
GYPB-208ENST00000507009 RUSC2Q8N2Y8 1516 aa10.26□□□□□ -0.77
GYPB-208ENST00000507009 ADCY10Q96PN6 1610 aa10.23□□□□□ -0.77
GYPB-208ENST00000507009 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
GYPB-208ENST00000507009 DIP2BQ9P265 1576 aa10.22□□□□□ -0.77
GYPB-208ENST00000507009 KDM6BO15054 1643 aa10.22□□□□□ -0.77
GYPB-208ENST00000507009 U3KPZ7 1027 aaPredicted RBP10.22□□□□□ -0.77
GYPB-208ENST00000507009 MAPKBP1O60336 1514 aa10.2□□□□□ -0.78
GYPB-208ENST00000507009 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
GYPB-208ENST00000507009 KIAA0586Q9BVV6 1533 aa10.16□□□□□ -0.78
GYPB-208ENST00000507009 CUL7Q14999 1698 aa10.15□□□□□ -0.79
GYPB-208ENST00000507009 PTPRGP23470 1445 aa10.14□□□□□ -0.79
GYPB-208ENST00000507009 KIF27Q86VH2 1401 aa10.14□□□□□ -0.79
GYPB-208ENST00000507009 IGF1RP08069 1367 aa10.14□□□□□ -0.79
GYPB-208ENST00000507009 SLC4A2P04920 1241 aa10.12□□□□□ -0.79
GYPB-208ENST00000507009 CARMIL2Q6F5E8 1435 aa10.1□□□□□ -0.79
GYPB-208ENST00000507009 ASXL2Q76L83 1435 aa10.09□□□□□ -0.79
GYPB-208ENST00000507009 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
GYPB-208ENST00000507009 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
GYPB-208ENST00000507009 ABCC2Q92887 1545 aa10.08□□□□□ -0.8
GYPB-208ENST00000507009 SPINK5Q9NQ38 1064 aaPredicted RBP10.08□□□□□ -0.8
GYPB-208ENST00000507009 PPRC1Q5VV67 1664 aaKnown RBP10.07□□□□□ -0.8
GYPB-208ENST00000507009 IQGAP2Q13576 1575 aa10.07□□□□□ -0.8
GYPB-208ENST00000507009 ADGRL1O94910 1474 aa10.07□□□□□ -0.8
GYPB-208ENST00000507009 CAPN15O75808 1086 aa10.07□□□□□ -0.8
GYPB-208ENST00000507009 ILDR1Q86SU0 546 aaPredicted RBP10.07□□□□□ -0.8
GYPB-208ENST00000507009 PLB1Q6P1J6 1458 aa10.06□□□□□ -0.8
GYPB-208ENST00000507009 UACAQ9BZF9 1416 aa10.04□□□□□ -0.8
GYPB-208ENST00000507009 GLI2P10070 1586 aa10.03□□□□□ -0.8
GYPB-208ENST00000507009 ZCCHC11Q5TAX3 1644 aaKnown RBP10.03□□□□□ -0.8
GYPB-208ENST00000507009 DISP1Q96F81 1524 aa10.02□□□□□ -0.81
GYPB-208ENST00000507009 UHRF1BP1LA0JNW5 1464 aa10.01□□□□□ -0.81
GYPB-208ENST00000507009 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
GYPB-208ENST00000507009 EPRSP07814 1512 aaKnown RBP10.01□□□□□ -0.81
GYPB-208ENST00000507009 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
GYPB-208ENST00000507009 TEX14Q8IWB6 1497 aa9.99□□□□□ -0.81
GYPB-208ENST00000507009 DSG3P32926 999 aa9.99□□□□□ -0.81
GYPB-208ENST00000507009 HECW2Q9P2P5 1572 aa9.99□□□□□ -0.81
GYPB-208ENST00000507009 KIAA0556O60303 1618 aa9.98□□□□□ -0.81
GYPB-208ENST00000507009 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
GYPB-208ENST00000507009 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
GYPB-208ENST00000507009 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
GYPB-208ENST00000507009 UGGT2Q9NYU1 1516 aa9.97□□□□□ -0.81
GYPB-208ENST00000507009 ARID3CA6NKF2 412 aa9.95□□□□□ -0.82
GYPB-208ENST00000507009 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
GYPB-208ENST00000507009 CTTNBP2Q8WZ74 1663 aa9.95□□□□□ -0.82
GYPB-208ENST00000507009 APLP2Q06481 763 aa9.93□□□□□ -0.82
GYPB-208ENST00000507009 KIF21BO75037 1637 aa9.93□□□□□ -0.82
GYPB-208ENST00000507009 CD109Q6YHK3 1445 aa9.92□□□□□ -0.82
GYPB-208ENST00000507009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.92□□□□□ -0.82
GYPB-208ENST00000507009 HNRNPUL2Q1KMD3 747 aaKnown RBP9.92□□□□□ -0.82
GYPB-208ENST00000507009 CFAP43Q8NDM7 1665 aa9.91□□□□□ -0.82
GYPB-208ENST00000507009 P3H3Q8IVL6 736 aa9.9□□□□□ -0.82
GYPB-208ENST00000507009 GOLGA3Q08378 1498 aa9.89□□□□□ -0.83
GYPB-208ENST00000507009 ABCA8O94911 1581 aa9.88□□□□□ -0.83
GYPB-208ENST00000507009 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
GYPB-208ENST00000507009 ZNF219Q9P2Y4 722 aaPredicted RBP9.87□□□□□ -0.83
GYPB-208ENST00000507009 ABCB7O75027 752 aa9.86□□□□□ -0.83
GYPB-208ENST00000507009 SAMD1Q6SPF0 538 aaPredicted RBP9.86□□□□□ -0.83
GYPB-208ENST00000507009 RANGAP1P46060 587 aaPredicted RBP9.85□□□□□ -0.83
GYPB-208ENST00000507009 FAM9AQ8IZU1 332 aaPredicted RBP9.85□□□□□ -0.83
GYPB-208ENST00000507009 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
GYPB-208ENST00000507009 SLC4A1APQ9BWU0 796 aaKnown RBP9.83□□□□□ -0.84
GYPB-208ENST00000507009 RAPGEF3O95398 923 aa9.82□□□□□ -0.84
GYPB-208ENST00000507009 ATP10BO94823 1461 aa9.81□□□□□ -0.84
GYPB-208ENST00000507009 MYCNP04198 464 aaPredicted RBP9.81□□□□□ -0.84
GYPB-208ENST00000507009 ARAP3Q8WWN8 1544 aa9.8□□□□□ -0.84
GYPB-208ENST00000507009 PTPRMP28827 1452 aa9.79□□□□□ -0.84
GYPB-208ENST00000507009 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
GYPB-208ENST00000507009 ABCA9Q8IUA7 1624 aa9.79□□□□□ -0.84
GYPB-208ENST00000507009 FBXO41Q8TF61 875 aa9.79□□□□□ -0.84
GYPB-208ENST00000507009 RAPGEF6Q8TEU7 1601 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms