RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
HERC6-206ENST00000506714 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
HERC6-206ENST00000506714 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
HERC6-206ENST00000506714 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
HERC6-206ENST00000506714 MAP3K1Q13233 1512 aa21.8■■□□□ 1.08
HERC6-206ENST00000506714 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
HERC6-206ENST00000506714 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
HERC6-206ENST00000506714 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
HERC6-206ENST00000506714 TIAM1Q13009 1591 aa21.71■■□□□ 1.07
HERC6-206ENST00000506714 IGF1RP08069 1367 aa21.71■■□□□ 1.07
HERC6-206ENST00000506714 WDR62O43379 1518 aa21.67■■□□□ 1.06
HERC6-206ENST00000506714 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
HERC6-206ENST00000506714 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
HERC6-206ENST00000506714 RAB3GAP2Q9H2M9 1393 aa21.66■■□□□ 1.06
HERC6-206ENST00000506714 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
HERC6-206ENST00000506714 MAPKBP1O60336 1514 aa21.63■■□□□ 1.05
HERC6-206ENST00000506714 SUPT16HQ9Y5B9 1047 aaKnown RBP21.63■■□□□ 1.05
HERC6-206ENST00000506714 CUL7Q14999 1698 aa21.62■■□□□ 1.05
HERC6-206ENST00000506714 SETD5Q9C0A6 1442 aa21.61■■□□□ 1.05
HERC6-206ENST00000506714 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
HERC6-206ENST00000506714 LRRC9Q6ZRR7 1453 aa21.61■■□□□ 1.05
HERC6-206ENST00000506714 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
HERC6-206ENST00000506714 ITGAEP38570 1179 aa21.59■■□□□ 1.05
HERC6-206ENST00000506714 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
HERC6-206ENST00000506714 GAPVD1Q14C86 1478 aa21.59■■□□□ 1.05
HERC6-206ENST00000506714 CFAP43Q8NDM7 1665 aa21.58■■□□□ 1.05
HERC6-206ENST00000506714 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
HERC6-206ENST00000506714 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
HERC6-206ENST00000506714 IFT140Q96RY7 1462 aa21.52■■□□□ 1.04
HERC6-206ENST00000506714 PHLDB1Q86UU1 1377 aa21.49■■□□□ 1.03
HERC6-206ENST00000506714 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
HERC6-206ENST00000506714 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.02
HERC6-206ENST00000506714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.45■■□□□ 1.02
HERC6-206ENST00000506714 CTTNBP2Q8WZ74 1663 aa21.44■■□□□ 1.02
HERC6-206ENST00000506714 EFCAB5A4FU69 1503 aa21.43■■□□□ 1.02
HERC6-206ENST00000506714 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
HERC6-206ENST00000506714 FYCO1Q9BQS8 1478 aa21.42■■□□□ 1.02
HERC6-206ENST00000506714 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
HERC6-206ENST00000506714 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
HERC6-206ENST00000506714 GRIN2BQ13224 1484 aa21.4■■□□□ 1.02
HERC6-206ENST00000506714 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
HERC6-206ENST00000506714 CASKIN1Q8WXD9 1431 aa21.36■■□□□ 1.01
HERC6-206ENST00000506714 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
HERC6-206ENST00000506714 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
HERC6-206ENST00000506714 KCNH8Q96L42 1107 aa21.34■■□□□ 1.01
HERC6-206ENST00000506714 PPP1R15AO75807 674 aaPredicted RBP21.33■■□□□ 1.01
HERC6-206ENST00000506714 TSHZ2Q9NRE2 1034 aa21.33■■□□□ 1.01
HERC6-206ENST00000506714 CCER2I3L3R5 266 aa21.3■■□□□ 1
HERC6-206ENST00000506714 FHOD3Q2V2M9 1422 aa21.3■■□□□ 1
HERC6-206ENST00000506714 SLC24A1O60721 1099 aa21.29■■□□□ 1
HERC6-206ENST00000506714 P3H3Q8IVL6 736 aa21.28■■□□□ 1
HERC6-206ENST00000506714 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
HERC6-206ENST00000506714 FMN1Q68DA7 1419 aa21.27■■□□□ 1
HERC6-206ENST00000506714 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
HERC6-206ENST00000506714 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
HERC6-206ENST00000506714 ANP32CO43423 234 aa21.23■□□□□ 0.99
HERC6-206ENST00000506714 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
HERC6-206ENST00000506714 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
HERC6-206ENST00000506714 TONSLQ96HA7 1378 aa21.19■□□□□ 0.98
HERC6-206ENST00000506714 UACAQ9BZF9 1416 aa21.19■□□□□ 0.98
HERC6-206ENST00000506714 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
HERC6-206ENST00000506714 FKBP8Q14318 412 aa21.18■□□□□ 0.98
HERC6-206ENST00000506714 NEFLP07196 543 aa21.18■□□□□ 0.98
HERC6-206ENST00000506714 IQGAP2Q13576 1575 aa21.17■□□□□ 0.98
HERC6-206ENST00000506714 PTPN23Q9H3S7 1636 aa21.16■□□□□ 0.98
HERC6-206ENST00000506714 SAMD9Q5K651 1589 aa21.16■□□□□ 0.98
HERC6-206ENST00000506714 GRIN2AQ12879 1464 aa21.15■□□□□ 0.98
HERC6-206ENST00000506714 MTUS2Q5JR59 1369 aa21.15■□□□□ 0.98
HERC6-206ENST00000506714 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
HERC6-206ENST00000506714 SUPT6HQ7KZ85 1726 aaKnown RBP21.11■□□□□ 0.97
HERC6-206ENST00000506714 LRRIQ1Q96JM4 1722 aa21.11■□□□□ 0.97
HERC6-206ENST00000506714 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
HERC6-206ENST00000506714 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
HERC6-206ENST00000506714 BCANQ96GW7 911 aa21.09■□□□□ 0.97
HERC6-206ENST00000506714 HIRIP3Q9BW71 556 aaPredicted RBP21.09■□□□□ 0.97
HERC6-206ENST00000506714 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.96
HERC6-206ENST00000506714 NAIPQ13075 1403 aa21.08■□□□□ 0.96
HERC6-206ENST00000506714 PTPRKQ15262 1439 aa21.08■□□□□ 0.96
HERC6-206ENST00000506714 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
HERC6-206ENST00000506714 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
HERC6-206ENST00000506714 EHBP1L1Q8N3D4 1523 aa21.07■□□□□ 0.96
HERC6-206ENST00000506714 FBLN2P98095 1184 aa21.05■□□□□ 0.96
HERC6-206ENST00000506714 KIAA0586Q9BVV6 1533 aa21.05■□□□□ 0.96
HERC6-206ENST00000506714 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
HERC6-206ENST00000506714 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
HERC6-206ENST00000506714 UGGT2Q9NYU1 1516 aa21.02■□□□□ 0.95
HERC6-206ENST00000506714 GCC2Q8IWJ2 1684 aa21■□□□□ 0.95
HERC6-206ENST00000506714 KDM5BQ9UGL1 1544 aa20.99■□□□□ 0.95
HERC6-206ENST00000506714 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
HERC6-206ENST00000506714 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
HERC6-206ENST00000506714 NUP160Q12769 1436 aa20.96■□□□□ 0.95
HERC6-206ENST00000506714 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
HERC6-206ENST00000506714 CHD1O14646 1710 aa20.95■□□□□ 0.94
HERC6-206ENST00000506714 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
HERC6-206ENST00000506714 KIAA0556O60303 1618 aa20.94■□□□□ 0.94
HERC6-206ENST00000506714 RBM19Q9Y4C8 960 aaKnown RBP20.92■□□□□ 0.94
HERC6-206ENST00000506714 DISP1Q96F81 1524 aa20.9■□□□□ 0.94
HERC6-206ENST00000506714 MAGI3Q5TCQ9 1506 aa20.87■□□□□ 0.93
HERC6-206ENST00000506714 MIA2Q96PC5 1412 aa20.86■□□□□ 0.93
HERC6-206ENST00000506714 HNRNPUQ00839 825 aaKnown RBP eCLIP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms