RNA–Protein interactions for RNA: ENST00000506348.1

CDHR2-203, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,005 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-203ENST00000506348 CCER2I3L3R5 266 aa15.38■□□□□ 0.05
CDHR2-203ENST00000506348 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
CDHR2-203ENST00000506348 HIRIP3Q9BW71 556 aaPredicted RBP15.36■□□□□ 0.05
CDHR2-203ENST00000506348 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
CDHR2-203ENST00000506348 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
CDHR2-203ENST00000506348 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
CDHR2-203ENST00000506348 RBM19Q9Y4C8 960 aaKnown RBP15.33■□□□□ 0.05
CDHR2-203ENST00000506348 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.04
CDHR2-203ENST00000506348 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
CDHR2-203ENST00000506348 BCL11AQ9H165 835 aa15.28■□□□□ 0.04
CDHR2-203ENST00000506348 CUX1P39880 1505 aa15.28■□□□□ 0.04
CDHR2-203ENST00000506348 PPP1R15AO75807 674 aaPredicted RBP15.28■□□□□ 0.04
CDHR2-203ENST00000506348 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
CDHR2-203ENST00000506348 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
CDHR2-203ENST00000506348 MAPKBP1O60336 1514 aa15.26■□□□□ 0.03
CDHR2-203ENST00000506348 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
CDHR2-203ENST00000506348 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
CDHR2-203ENST00000506348 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
CDHR2-203ENST00000506348 PHLDB1Q86UU1 1377 aa15.24■□□□□ 0.03
CDHR2-203ENST00000506348 MAP3K1Q13233 1512 aa15.23■□□□□ 0.03
CDHR2-203ENST00000506348 IGF1RP08069 1367 aa15.21■□□□□ 0.03
CDHR2-203ENST00000506348 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
CDHR2-203ENST00000506348 IRX6P78412 446 aaPredicted RBP15.18■□□□□ 0.02
CDHR2-203ENST00000506348 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
CDHR2-203ENST00000506348 CFTRP13569 1480 aa15.17■□□□□ 0.02
CDHR2-203ENST00000506348 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
CDHR2-203ENST00000506348 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
CDHR2-203ENST00000506348 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
CDHR2-203ENST00000506348 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
CDHR2-203ENST00000506348 ERICH6BQ5W0A0 696 aa15.09■□□□□ 0.01
CDHR2-203ENST00000506348 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDHR2-203ENST00000506348 PPP4R2Q9NY27 417 aa15.09■□□□□ 0.01
CDHR2-203ENST00000506348 FANCIQ9NVI1 1328 aa15.08■□□□□ 0
CDHR2-203ENST00000506348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
CDHR2-203ENST00000506348 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
CDHR2-203ENST00000506348 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
CDHR2-203ENST00000506348 FMN1Q68DA7 1419 aa15.06■□□□□ 0
CDHR2-203ENST00000506348 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
CDHR2-203ENST00000506348 FGD6Q6ZV73 1430 aa15.06■□□□□ 0
CDHR2-203ENST00000506348 UACAQ9BZF9 1416 aa15.06■□□□□ 0
CDHR2-203ENST00000506348 PCF11O94913 1555 aaKnown RBP15.06■□□□□ 0
CDHR2-203ENST00000506348 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
CDHR2-203ENST00000506348 MRS2Q9HD23 443 aa15.05■□□□□ -0
CDHR2-203ENST00000506348 CASKIN1Q8WXD9 1431 aa15.04■□□□□ -0
CDHR2-203ENST00000506348 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
CDHR2-203ENST00000506348 RRP7BPQ9NSQ0 103 aa15.02■□□□□ -0
CDHR2-203ENST00000506348 CHIC2Q9UKJ5 165 aa15.02□□□□□ -0.01
CDHR2-203ENST00000506348 CFAP43Q8NDM7 1665 aa15.01□□□□□ -0.01
CDHR2-203ENST00000506348 EFCAB5A4FU69 1503 aa15□□□□□ -0.01
CDHR2-203ENST00000506348 HFM1A2PYH4 1435 aa15□□□□□ -0.01
CDHR2-203ENST00000506348 MSH5O43196 834 aa14.98□□□□□ -0.01
CDHR2-203ENST00000506348 POLR3GLQ9BT43 218 aa14.98□□□□□ -0.01
CDHR2-203ENST00000506348 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.01
CDHR2-203ENST00000506348 B4GALNT3Q6L9W6 998 aa14.96□□□□□ -0.01
CDHR2-203ENST00000506348 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.01
CDHR2-203ENST00000506348 RTL5Q5HYW3 569 aaPredicted RBP14.95□□□□□ -0.02
CDHR2-203ENST00000506348 WASHC2AQ641Q2 1341 aa14.95□□□□□ -0.02
CDHR2-203ENST00000506348 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
CDHR2-203ENST00000506348 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
CDHR2-203ENST00000506348 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
CDHR2-203ENST00000506348 NAIPQ13075 1403 aa14.91□□□□□ -0.02
CDHR2-203ENST00000506348 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
CDHR2-203ENST00000506348 PRKRIP1Q9H875 184 aaPredicted RBP14.9□□□□□ -0.02
CDHR2-203ENST00000506348 ZBED9Q6R2W3 1325 aa14.9□□□□□ -0.02
CDHR2-203ENST00000506348 NCOA2Q15596 1464 aa14.9□□□□□ -0.02
CDHR2-203ENST00000506348 NOP58Q9Y2X3 529 aaKnown RBP14.9□□□□□ -0.02
CDHR2-203ENST00000506348 PTPN23Q9H3S7 1636 aa14.9□□□□□ -0.02
CDHR2-203ENST00000506348 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
CDHR2-203ENST00000506348 NBR1Q14596 966 aa14.89□□□□□ -0.03
CDHR2-203ENST00000506348 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
CDHR2-203ENST00000506348 L3MBTL2Q969R5 705 aa14.88□□□□□ -0.03
CDHR2-203ENST00000506348 MPHOSPH9Q99550 1183 aa14.88□□□□□ -0.03
CDHR2-203ENST00000506348 DEKP35659 375 aaKnown RBP14.87□□□□□ -0.03
CDHR2-203ENST00000506348 PTPRKQ15262 1439 aa14.85□□□□□ -0.03
CDHR2-203ENST00000506348 CCDC7Q96M83 1385 aa14.85□□□□□ -0.03
CDHR2-203ENST00000506348 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
CDHR2-203ENST00000506348 ZNF326Q5BKZ1 582 aaKnown RBP14.85□□□□□ -0.03
CDHR2-203ENST00000506348 ARID3CA6NKF2 412 aa14.84□□□□□ -0.03
CDHR2-203ENST00000506348 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
CDHR2-203ENST00000506348 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
CDHR2-203ENST00000506348 ABCA10Q8WWZ4 1543 aa14.83□□□□□ -0.04
CDHR2-203ENST00000506348 CCDC184Q52MB2 194 aa14.82□□□□□ -0.04
CDHR2-203ENST00000506348 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
CDHR2-203ENST00000506348 FOXD1Q16676 465 aa14.82□□□□□ -0.04
CDHR2-203ENST00000506348 SUPT6HQ7KZ85 1726 aaKnown RBP14.81□□□□□ -0.04
CDHR2-203ENST00000506348 CUL7Q14999 1698 aa14.81□□□□□ -0.04
CDHR2-203ENST00000506348 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
CDHR2-203ENST00000506348 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
CDHR2-203ENST00000506348 FBLN2P98095 1184 aa14.8□□□□□ -0.04
CDHR2-203ENST00000506348 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
CDHR2-203ENST00000506348 TMC1Q8TDI8 760 aa14.79□□□□□ -0.04
CDHR2-203ENST00000506348 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
CDHR2-203ENST00000506348 NUDCQ9Y266 331 aa14.78□□□□□ -0.04
CDHR2-203ENST00000506348 SNAPC4Q5SXM2 1469 aa14.78□□□□□ -0.04
CDHR2-203ENST00000506348 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
CDHR2-203ENST00000506348 KIF7Q2M1P5 1343 aa14.76□□□□□ -0.05
CDHR2-203ENST00000506348 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
CDHR2-203ENST00000506348 NCOA1Q15788 1441 aa14.76□□□□□ -0.05
CDHR2-203ENST00000506348 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
CDHR2-203ENST00000506348 C11orf95C9JLR9 678 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms