RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 RIMBP3CA6NJZ7 1639 aa37.94■■■■□ 3.66
SPOCK1-204ENST00000505690 RIMBP3BA6NNM3 1639 aa37.94■■■■□ 3.66
SPOCK1-204ENST00000505690 RIMBP3Q9UFD9 1639 aa37.94■■■■□ 3.66
SPOCK1-204ENST00000505690 SHROOM2Q13796 1616 aa37.92■■■■□ 3.66
SPOCK1-204ENST00000505690 KIF21BO75037 1637 aa37.88■■■■□ 3.65
SPOCK1-204ENST00000505690 JPH4Q96JJ6 628 aa37.86■■■■□ 3.65
SPOCK1-204ENST00000505690 IQGAP2Q13576 1575 aa37.83■■■■□ 3.65
SPOCK1-204ENST00000505690 CTTNBP2Q8WZ74 1663 aa37.81■■■■□ 3.64
SPOCK1-204ENST00000505690 PRG4Q92954 1404 aaPredicted RBP37.77■■■■□ 3.64
SPOCK1-204ENST00000505690 ERCC6L2Q5T890 1561 aa37.76■■■■□ 3.63
SPOCK1-204ENST00000505690 ARAP1Q96P48 1450 aa37.7■■■■□ 3.63
SPOCK1-204ENST00000505690 GOLGA3Q08378 1498 aa37.68■■■■□ 3.62
SPOCK1-204ENST00000505690 UGGT2Q9NYU1 1516 aa37.64■■■■□ 3.62
SPOCK1-204ENST00000505690 EHMT2Q96KQ7 1210 aa37.63■■■■□ 3.61
SPOCK1-204ENST00000505690 CYB5RLQ6IPT4 315 aa37.59■■■■□ 3.61
SPOCK1-204ENST00000505690 CARMIL2Q6F5E8 1435 aa37.56■■■■□ 3.6
SPOCK1-204ENST00000505690 UBTFP17480 764 aaKnown RBP37.54■■■■□ 3.6
SPOCK1-204ENST00000505690 DISP1Q96F81 1524 aa37.53■■■■□ 3.6
SPOCK1-204ENST00000505690 KIAA0556O60303 1618 aa37.47■■■■□ 3.59
SPOCK1-204ENST00000505690 TNIKQ9UKE5 1360 aa37.42■■■■□ 3.58
SPOCK1-204ENST00000505690 PTPRGP23470 1445 aa37.36■■■■□ 3.57
SPOCK1-204ENST00000505690 SAMD9Q5K651 1589 aa37.34■■■■□ 3.57
SPOCK1-204ENST00000505690 RANGAP1P46060 587 aaPredicted RBP37.34■■■■□ 3.57
SPOCK1-204ENST00000505690 TTBK1Q5TCY1 1321 aaPredicted RBP37.31■■■■□ 3.56
SPOCK1-204ENST00000505690 P3H3Q8IVL6 736 aa37.25■■■■□ 3.55
SPOCK1-204ENST00000505690 EFCAB5A4FU69 1503 aa37.25■■■■□ 3.55
SPOCK1-204ENST00000505690 LOC105371045A0A1W2PR82 267 aa37.15■■■■□ 3.54
SPOCK1-204ENST00000505690 ADCY10Q96PN6 1610 aa37.14■■■■□ 3.54
SPOCK1-204ENST00000505690 FHOD3Q2V2M9 1422 aa37.14■■■■□ 3.54
SPOCK1-204ENST00000505690 UACAQ9BZF9 1416 aa37.13■■■■□ 3.53
SPOCK1-204ENST00000505690 ARHGAP35Q9NRY4 1499 aa37.12■■■■□ 3.53
SPOCK1-204ENST00000505690 UHRF1BP1LA0JNW5 1464 aa37.07■■■■□ 3.53
SPOCK1-204ENST00000505690 ABCC2Q92887 1545 aa37.06■■■■□ 3.52
SPOCK1-204ENST00000505690 PLB1Q6P1J6 1458 aa37.06■■■■□ 3.52
SPOCK1-204ENST00000505690 ABCA8O94911 1581 aa37.04■■■■□ 3.52
SPOCK1-204ENST00000505690 CLIP1P30622 1438 aa37.01■■■■□ 3.51
SPOCK1-204ENST00000505690 NPM1P06748 294 aaKnown RBP eCLIP36.99■■■■□ 3.51
SPOCK1-204ENST00000505690 CEP162Q5TB80 1403 aa36.93■■■■□ 3.5
SPOCK1-204ENST00000505690 RAPGEF6Q8TEU7 1601 aa36.92■■■■□ 3.5
SPOCK1-204ENST00000505690 KDM5BQ9UGL1 1544 aa36.9■■■■□ 3.5
SPOCK1-204ENST00000505690 FMN1Q68DA7 1419 aa36.89■■■■□ 3.5
SPOCK1-204ENST00000505690 MAPKBP1O60336 1514 aa36.84■■■■□ 3.49
SPOCK1-204ENST00000505690 ZCCHC11Q5TAX3 1644 aaKnown RBP36.83■■■■□ 3.49
SPOCK1-204ENST00000505690 NUP153P49790 1475 aaKnown RBP36.77■■■■□ 3.48
SPOCK1-204ENST00000505690 ARID3CA6NKF2 412 aa36.73■■■■□ 3.47
SPOCK1-204ENST00000505690 ATP10BO94823 1461 aa36.72■■■■□ 3.47
SPOCK1-204ENST00000505690 ASXL2Q76L83 1435 aa36.71■■■■□ 3.47
SPOCK1-204ENST00000505690 TRHP20396 242 aaPredicted RBP36.7■■■■□ 3.47
SPOCK1-204ENST00000505690 HECW1Q76N89 1606 aa36.69■■■■□ 3.46
SPOCK1-204ENST00000505690 PCF11O94913 1555 aaKnown RBP36.66■■■■□ 3.46
SPOCK1-204ENST00000505690 ATP1B4Q9UN42 357 aaPredicted RBP36.65■■■■□ 3.46
SPOCK1-204ENST00000505690 CASKIN1Q8WXD9 1431 aa36.65■■■■□ 3.46
SPOCK1-204ENST00000505690 ABCC10Q5T3U5 1492 aa36.62■■■■□ 3.45
SPOCK1-204ENST00000505690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.61■■■■□ 3.45
SPOCK1-204ENST00000505690 HNRNPUL2Q1KMD3 747 aaKnown RBP36.61■■■■□ 3.45
SPOCK1-204ENST00000505690 WDR7Q9Y4E6 1490 aa36.59■■■■□ 3.45
SPOCK1-204ENST00000505690 DIP2BQ9P265 1576 aa36.58■■■■□ 3.45
SPOCK1-204ENST00000505690 FYCO1Q9BQS8 1478 aa36.58■■■■□ 3.45
SPOCK1-204ENST00000505690 EPRSP07814 1512 aaKnown RBP36.57■■■■□ 3.44
SPOCK1-204ENST00000505690 CDK13Q14004 1512 aaKnown RBP36.56■■■■□ 3.44
SPOCK1-204ENST00000505690 KIF13AQ9H1H9 1805 aa36.55■■■■□ 3.44
SPOCK1-204ENST00000505690 FAM69CQ0P6D2 419 aa36.52■■■■□ 3.44
SPOCK1-204ENST00000505690 LRRIQ1Q96JM4 1722 aa36.51■■■■□ 3.44
SPOCK1-204ENST00000505690 VPS8Q8N3P4 1428 aa36.47■■■■□ 3.43
SPOCK1-204ENST00000505690 CCDC18Q5T9S5 1454 aa36.47■■■■□ 3.43
SPOCK1-204ENST00000505690 GLI2P10070 1586 aa36.45■■■■□ 3.43
SPOCK1-204ENST00000505690 PLEKHD1A6NEE1 506 aa36.44■■■■□ 3.42
SPOCK1-204ENST00000505690 KCNH8Q96L42 1107 aa36.42■■■■□ 3.42
SPOCK1-204ENST00000505690 CDK11AQ9UQ88 783 aaPredicted RBP36.37■■■■□ 3.41
SPOCK1-204ENST00000505690 MAP3K4Q9Y6R4 1608 aa36.3■■■■□ 3.4
SPOCK1-204ENST00000505690 TROQ12816 1431 aaPredicted RBP36.27■■■■□ 3.4
SPOCK1-204ENST00000505690 CFAP43Q8NDM7 1665 aa36.26■■■■□ 3.4
SPOCK1-204ENST00000505690 ABCA9Q8IUA7 1624 aa36.25■■■■□ 3.39
SPOCK1-204ENST00000505690 TSPOAP1O95153 1857 aa36.24■■■■□ 3.39
SPOCK1-204ENST00000505690 MAGI3Q5TCQ9 1506 aa36.23■■■■□ 3.39
SPOCK1-204ENST00000505690 CD109Q6YHK3 1445 aa36.21■■■■□ 3.39
SPOCK1-204ENST00000505690 PPRC1Q5VV67 1664 aaKnown RBP36.18■■■■□ 3.38
SPOCK1-204ENST00000505690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.18■■■■□ 3.38
SPOCK1-204ENST00000505690 KIF14Q15058 1648 aa36.17■■■■□ 3.38
SPOCK1-204ENST00000505690 TIAM1Q13009 1591 aa36.16■■■■□ 3.38
SPOCK1-204ENST00000505690 TTC37Q6PGP7 1564 aa36.13■■■■□ 3.37
SPOCK1-204ENST00000505690 MTUS2Q5JR59 1369 aa36.12■■■■□ 3.37
SPOCK1-204ENST00000505690 MAP3K1Q13233 1512 aa36.11■■■■□ 3.37
SPOCK1-204ENST00000505690 TEX14Q8IWB6 1497 aa36.11■■■■□ 3.37
SPOCK1-204ENST00000505690 EHBP1L1Q8N3D4 1523 aa36.08■■■■□ 3.37
SPOCK1-204ENST00000505690 APLP2Q06481 763 aa36.04■■■■□ 3.36
SPOCK1-204ENST00000505690 LRRC9Q6ZRR7 1453 aa35.99■■■■□ 3.35
SPOCK1-204ENST00000505690 MYO5CQ9NQX4 1742 aa35.97■■■■□ 3.35
SPOCK1-204ENST00000505690 PLCH2O75038 1416 aa35.97■■■■□ 3.35
SPOCK1-204ENST00000505690 KANK4Q5T7N3 995 aaPredicted RBP35.93■■■■□ 3.34
SPOCK1-204ENST00000505690 ARAP3Q8WWN8 1544 aa35.91■■■■□ 3.34
SPOCK1-204ENST00000505690 NEO1Q92859 1461 aa35.91■■■■□ 3.34
SPOCK1-204ENST00000505690 SUPT6HQ7KZ85 1726 aaKnown RBP35.91■■■■□ 3.34
SPOCK1-204ENST00000505690 KDM6BO15054 1643 aa35.9■■■■□ 3.34
SPOCK1-204ENST00000505690 FANCAO15360 1455 aa35.9■■■■□ 3.34
SPOCK1-204ENST00000505690 CFAP74Q9C0B2 1584 aa35.88■■■■□ 3.33
SPOCK1-204ENST00000505690 PREX2Q70Z35 1606 aa35.87■■■■□ 3.33
SPOCK1-204ENST00000505690 PHLDB1Q86UU1 1377 aa35.87■■■■□ 3.33
SPOCK1-204ENST00000505690 CDC42BPAQ5VT25 1732 aa35.86■■■■□ 3.33
SPOCK1-204ENST00000505690 NCOA2Q15596 1464 aa35.86■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms