RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 RAD54L2Q9Y4B4 1467 aa8.45□□□□□ -1.06
CPNE4-204ENST00000505331 WDR97A6NE52 1622 aa8.43□□□□□ -1.06
CPNE4-204ENST00000505331 MAPKBP1O60336 1514 aa8.42□□□□□ -1.06
CPNE4-204ENST00000505331 DIP2BQ9P265 1576 aa8.42□□□□□ -1.06
CPNE4-204ENST00000505331 CEP170Q5SW79 1584 aa8.39□□□□□ -1.07
CPNE4-204ENST00000505331 TOP2AP11388 1531 aaKnown RBP8.37□□□□□ -1.07
CPNE4-204ENST00000505331 CERKQ8TCT0 537 aa8.36□□□□□ -1.07
CPNE4-204ENST00000505331 PRDM2Q13029 1718 aa8.35□□□□□ -1.07
CPNE4-204ENST00000505331 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
CPNE4-204ENST00000505331 NUP160Q12769 1436 aa8.34□□□□□ -1.07
CPNE4-204ENST00000505331 TOP2BQ02880 1626 aa8.33□□□□□ -1.08
CPNE4-204ENST00000505331 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
CPNE4-204ENST00000505331 PRG4Q92954 1404 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-204ENST00000505331 FGD5Q6ZNL6 1462 aa8.31□□□□□ -1.08
CPNE4-204ENST00000505331 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
CPNE4-204ENST00000505331 CCDC88BA6NC98 1476 aa8.3□□□□□ -1.08
CPNE4-204ENST00000505331 COL17A1Q9UMD9 1497 aaPredicted RBP8.3□□□□□ -1.08
CPNE4-204ENST00000505331 JPH4Q96JJ6 628 aa8.29□□□□□ -1.08
CPNE4-204ENST00000505331 TSPOAP1O95153 1857 aa8.25□□□□□ -1.09
CPNE4-204ENST00000505331 ADCY10Q96PN6 1610 aa8.24□□□□□ -1.09
CPNE4-204ENST00000505331 PCF11O94913 1555 aaKnown RBP8.23□□□□□ -1.09
CPNE4-204ENST00000505331 PTPRMP28827 1452 aa8.23□□□□□ -1.09
CPNE4-204ENST00000505331 TEX14Q8IWB6 1497 aa8.22□□□□□ -1.09
CPNE4-204ENST00000505331 GLI2P10070 1586 aa8.22□□□□□ -1.09
CPNE4-204ENST00000505331 PBRM1Q86U86 1689 aa8.21□□□□□ -1.1
CPNE4-204ENST00000505331 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
CPNE4-204ENST00000505331 PLB1Q6P1J6 1458 aa8.2□□□□□ -1.1
CPNE4-204ENST00000505331 ABCA10Q8WWZ4 1543 aa8.19□□□□□ -1.1
CPNE4-204ENST00000505331 ASXL2Q76L83 1435 aa8.19□□□□□ -1.1
CPNE4-204ENST00000505331 PPRC1Q5VV67 1664 aaKnown RBP8.18□□□□□ -1.1
CPNE4-204ENST00000505331 ADAMTS12P58397 1594 aa8.18□□□□□ -1.1
CPNE4-204ENST00000505331 ABCA5Q8WWZ7 1642 aa8.18□□□□□ -1.1
CPNE4-204ENST00000505331 HSPA2P54652 639 aa8.17□□□□□ -1.1
CPNE4-204ENST00000505331 CUX1P39880 1505 aa8.17□□□□□ -1.1
CPNE4-204ENST00000505331 ABCC2Q92887 1545 aa8.14□□□□□ -1.11
CPNE4-204ENST00000505331 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
CPNE4-204ENST00000505331 PTPRGP23470 1445 aa8.12□□□□□ -1.11
CPNE4-204ENST00000505331 KIAA0586Q9BVV6 1533 aa8.12□□□□□ -1.11
CPNE4-204ENST00000505331 DMRT2Q9Y5R5 561 aa8.11□□□□□ -1.11
CPNE4-204ENST00000505331 MAPK8IP2Q13387 824 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-204ENST00000505331 MAP3K4Q9Y6R4 1608 aa8.1□□□□□ -1.11
CPNE4-204ENST00000505331 ADAMTSL3P82987 1691 aa8.09□□□□□ -1.11
CPNE4-204ENST00000505331 RUSC2Q8N2Y8 1516 aa8.08□□□□□ -1.12
CPNE4-204ENST00000505331 KIF21BO75037 1637 aa8.07□□□□□ -1.12
CPNE4-204ENST00000505331 ERICH3Q5RHP9 1530 aa8.07□□□□□ -1.12
CPNE4-204ENST00000505331 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
CPNE4-204ENST00000505331 UHRF1BP1LA0JNW5 1464 aa8.06□□□□□ -1.12
CPNE4-204ENST00000505331 YEATS2Q9ULM3 1422 aa8.05□□□□□ -1.12
CPNE4-204ENST00000505331 MAGI3Q5TCQ9 1506 aa8.05□□□□□ -1.12
CPNE4-204ENST00000505331 IQSEC2Q5JU85 1478 aa8.05□□□□□ -1.12
CPNE4-204ENST00000505331 ARID4BQ4LE39 1312 aaPredicted RBP8.04□□□□□ -1.12
CPNE4-204ENST00000505331 TTBK1Q5TCY1 1321 aaPredicted RBP8.04□□□□□ -1.12
CPNE4-204ENST00000505331 TNIKQ9UKE5 1360 aa8.04□□□□□ -1.12
CPNE4-204ENST00000505331 CD109Q6YHK3 1445 aa8.03□□□□□ -1.12
CPNE4-204ENST00000505331 UACAQ9BZF9 1416 aa8.03□□□□□ -1.12
CPNE4-204ENST00000505331 KDM5BQ9UGL1 1544 aa8.02□□□□□ -1.13
CPNE4-204ENST00000505331 MADDQ8WXG6 1647 aa8.01□□□□□ -1.13
CPNE4-204ENST00000505331 CARMIL2Q6F5E8 1435 aa8.01□□□□□ -1.13
CPNE4-204ENST00000505331 ARAP3Q8WWN8 1544 aa8□□□□□ -1.13
CPNE4-204ENST00000505331 WDR7Q9Y4E6 1490 aa7.99□□□□□ -1.13
CPNE4-204ENST00000505331 SCAF1Q9H7N4 1312 aaKnown RBP7.99□□□□□ -1.13
CPNE4-204ENST00000505331 BCORL1Q5H9F3 1711 aa7.98□□□□□ -1.13
CPNE4-204ENST00000505331 MED1Q15648 1581 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-204ENST00000505331 PTPRTO14522 1441 aa7.98□□□□□ -1.13
CPNE4-204ENST00000505331 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
CPNE4-204ENST00000505331 PHLDB1Q86UU1 1377 aa7.97□□□□□ -1.13
CPNE4-204ENST00000505331 CUL7Q14999 1698 aa7.96□□□□□ -1.13
CPNE4-204ENST00000505331 LTBP4Q8N2S1 1624 aa7.96□□□□□ -1.14
CPNE4-204ENST00000505331 RAPGEF3O95398 923 aa7.95□□□□□ -1.14
CPNE4-204ENST00000505331 POGZQ7Z3K3 1410 aa7.95□□□□□ -1.14
CPNE4-204ENST00000505331 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
CPNE4-204ENST00000505331 HSPA1LP34931 641 aa7.93□□□□□ -1.14
CPNE4-204ENST00000505331 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
CPNE4-204ENST00000505331 CFAP43Q8NDM7 1665 aa7.91□□□□□ -1.14
CPNE4-204ENST00000505331 ZCCHC11Q5TAX3 1644 aaKnown RBP7.9□□□□□ -1.14
CPNE4-204ENST00000505331 UHRF1BP1Q6BDS2 1440 aa7.89□□□□□ -1.15
CPNE4-204ENST00000505331 FANCAO15360 1455 aa7.87□□□□□ -1.15
CPNE4-204ENST00000505331 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
CPNE4-204ENST00000505331 NEO1Q92859 1461 aa7.86□□□□□ -1.15
CPNE4-204ENST00000505331 AKNAQ7Z591 1439 aa7.86□□□□□ -1.15
CPNE4-204ENST00000505331 TTC37Q6PGP7 1564 aa7.85□□□□□ -1.15
CPNE4-204ENST00000505331 CEBPAP49715 358 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-204ENST00000505331 PIP4K2BP78356 416 aa7.85□□□□□ -1.15
CPNE4-204ENST00000505331 MLECQ14165 292 aa7.85□□□□□ -1.15
CPNE4-204ENST00000505331 IGF1RP08069 1367 aa7.84□□□□□ -1.15
CPNE4-204ENST00000505331 ARHGEF40Q8TER5 1519 aa7.84□□□□□ -1.15
CPNE4-204ENST00000505331 DISP1Q96F81 1524 aa7.84□□□□□ -1.15
CPNE4-204ENST00000505331 PREX1Q8TCU6 1659 aa7.84□□□□□ -1.15
CPNE4-204ENST00000505331 TOM1O60784 492 aa7.84□□□□□ -1.15
CPNE4-204ENST00000505331 RGS17Q9UGC6 210 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-204ENST00000505331 ZNF335Q9H4Z2 1342 aaPredicted RBP7.83□□□□□ -1.16
CPNE4-204ENST00000505331 FRMPD1Q5SYB0 1578 aa7.82□□□□□ -1.16
CPNE4-204ENST00000505331 NCOA1Q15788 1441 aa7.81□□□□□ -1.16
CPNE4-204ENST00000505331 BIVM-ERCC5R4GMW8 1640 aa7.8□□□□□ -1.16
CPNE4-204ENST00000505331 DENND4BO75064 1496 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-204ENST00000505331 IQGAP2Q13576 1575 aa7.8□□□□□ -1.16
CPNE4-204ENST00000505331 FHOD3Q2V2M9 1422 aa7.79□□□□□ -1.16
CPNE4-204ENST00000505331 ARHGEF12Q9NZN5 1544 aa7.78□□□□□ -1.16
CPNE4-204ENST00000505331 MAGI2Q86UL8 1455 aa7.77□□□□□ -1.17
CPNE4-204ENST00000505331 CARMIL1Q5VZK9 1371 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms