RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 FHOD3Q2V2M9 1422 aa14.11□□□□□ -0.15
CSF1R-203ENST00000504875 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.16
CSF1R-203ENST00000504875 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
CSF1R-203ENST00000504875 POLA1P09884 1462 aaPredicted RBP14.07□□□□□ -0.16
CSF1R-203ENST00000504875 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
CSF1R-203ENST00000504875 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
CSF1R-203ENST00000504875 MTUS2Q5JR59 1369 aa14.05□□□□□ -0.16
CSF1R-203ENST00000504875 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
CSF1R-203ENST00000504875 FBLN2P98095 1184 aa14.02□□□□□ -0.17
CSF1R-203ENST00000504875 RAB3GAP2Q9H2M9 1393 aa14.01□□□□□ -0.17
CSF1R-203ENST00000504875 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
CSF1R-203ENST00000504875 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
CSF1R-203ENST00000504875 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
CSF1R-203ENST00000504875 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
CSF1R-203ENST00000504875 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
CSF1R-203ENST00000504875 BCL11AQ9H165 835 aa13.98□□□□□ -0.17
CSF1R-203ENST00000504875 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
CSF1R-203ENST00000504875 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
CSF1R-203ENST00000504875 GAPVD1Q14C86 1478 aa13.96□□□□□ -0.17
CSF1R-203ENST00000504875 LRRC9Q6ZRR7 1453 aa13.96□□□□□ -0.17
CSF1R-203ENST00000504875 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
CSF1R-203ENST00000504875 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
CSF1R-203ENST00000504875 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
CSF1R-203ENST00000504875 TIAM1Q13009 1591 aa13.94□□□□□ -0.18
CSF1R-203ENST00000504875 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
CSF1R-203ENST00000504875 FMN1Q68DA7 1419 aa13.93□□□□□ -0.18
CSF1R-203ENST00000504875 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
CSF1R-203ENST00000504875 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
CSF1R-203ENST00000504875 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
CSF1R-203ENST00000504875 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSF1R-203ENST00000504875 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
CSF1R-203ENST00000504875 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
CSF1R-203ENST00000504875 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
CSF1R-203ENST00000504875 TONSLQ96HA7 1378 aa13.85□□□□□ -0.19
CSF1R-203ENST00000504875 FYCO1Q9BQS8 1478 aa13.84□□□□□ -0.19
CSF1R-203ENST00000504875 ERCC6Q03468 1493 aa13.83□□□□□ -0.19
CSF1R-203ENST00000504875 CUL7Q14999 1698 aa13.83□□□□□ -0.2
CSF1R-203ENST00000504875 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.2
CSF1R-203ENST00000504875 ZNF777Q9ULD5 760 aaPredicted RBP13.82□□□□□ -0.2
CSF1R-203ENST00000504875 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
CSF1R-203ENST00000504875 FGD6Q6ZV73 1430 aa13.79□□□□□ -0.2
CSF1R-203ENST00000504875 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
CSF1R-203ENST00000504875 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
CSF1R-203ENST00000504875 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
CSF1R-203ENST00000504875 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
CSF1R-203ENST00000504875 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
CSF1R-203ENST00000504875 ANP32CO43423 234 aa13.73□□□□□ -0.21
CSF1R-203ENST00000504875 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
CSF1R-203ENST00000504875 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
CSF1R-203ENST00000504875 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
CSF1R-203ENST00000504875 GRIN2BQ13224 1484 aa13.71□□□□□ -0.21
CSF1R-203ENST00000504875 PPP1R15AO75807 674 aaPredicted RBP13.71□□□□□ -0.21
CSF1R-203ENST00000504875 CFAP43Q8NDM7 1665 aa13.71□□□□□ -0.21
CSF1R-203ENST00000504875 FOXD1Q16676 465 aa13.7□□□□□ -0.22
CSF1R-203ENST00000504875 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
CSF1R-203ENST00000504875 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
CSF1R-203ENST00000504875 ANP32EQ9BTT0 268 aa13.7□□□□□ -0.22
CSF1R-203ENST00000504875 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
CSF1R-203ENST00000504875 KCNH8Q96L42 1107 aa13.69□□□□□ -0.22
CSF1R-203ENST00000504875 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
CSF1R-203ENST00000504875 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
CSF1R-203ENST00000504875 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
CSF1R-203ENST00000504875 CFDP1Q9UEE9 299 aaPredicted RBP13.67□□□□□ -0.22
CSF1R-203ENST00000504875 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
CSF1R-203ENST00000504875 CDK13Q14004 1512 aaKnown RBP13.66□□□□□ -0.22
CSF1R-203ENST00000504875 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
CSF1R-203ENST00000504875 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
CSF1R-203ENST00000504875 WDR97A6NE52 1622 aa13.65□□□□□ -0.22
CSF1R-203ENST00000504875 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
CSF1R-203ENST00000504875 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
CSF1R-203ENST00000504875 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
CSF1R-203ENST00000504875 BCANQ96GW7 911 aa13.64□□□□□ -0.23
CSF1R-203ENST00000504875 EHBP1L1Q8N3D4 1523 aa13.63□□□□□ -0.23
CSF1R-203ENST00000504875 SUPT6HQ7KZ85 1726 aaKnown RBP13.63□□□□□ -0.23
CSF1R-203ENST00000504875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSF1R-203ENST00000504875 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
CSF1R-203ENST00000504875 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
CSF1R-203ENST00000504875 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
CSF1R-203ENST00000504875 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
CSF1R-203ENST00000504875 EPRSP07814 1512 aaKnown RBP13.62□□□□□ -0.23
CSF1R-203ENST00000504875 UACAQ9BZF9 1416 aa13.62□□□□□ -0.23
CSF1R-203ENST00000504875 PLEKHD1A6NEE1 506 aa13.61□□□□□ -0.23
CSF1R-203ENST00000504875 HFM1A2PYH4 1435 aa13.61□□□□□ -0.23
CSF1R-203ENST00000504875 NEFLP07196 543 aa13.61□□□□□ -0.23
CSF1R-203ENST00000504875 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
CSF1R-203ENST00000504875 NAIPQ13075 1403 aa13.6□□□□□ -0.23
CSF1R-203ENST00000504875 HECW1Q76N89 1606 aa13.59□□□□□ -0.23
CSF1R-203ENST00000504875 SAMD9Q5K651 1589 aa13.59□□□□□ -0.23
CSF1R-203ENST00000504875 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
CSF1R-203ENST00000504875 PTPN23Q9H3S7 1636 aa13.58□□□□□ -0.24
CSF1R-203ENST00000504875 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
CSF1R-203ENST00000504875 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
CSF1R-203ENST00000504875 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
CSF1R-203ENST00000504875 KIAA0586Q9BVV6 1533 aa13.55□□□□□ -0.24
CSF1R-203ENST00000504875 HSPA5P11021 654 aaKnown RBP13.55□□□□□ -0.24
CSF1R-203ENST00000504875 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
CSF1R-203ENST00000504875 TSPY4P0CV99 314 aa13.54□□□□□ -0.24
CSF1R-203ENST00000504875 TSPY10P0CW01 314 aa13.54□□□□□ -0.24
CSF1R-203ENST00000504875 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
CSF1R-203ENST00000504875 MAGI3Q5TCQ9 1506 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms