RNA–Protein interactions for RNA: ENST00000504496.5

KLHL3-205, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 1,832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-205ENST00000504496 WDR97A6NE52 1622 aa10.25□□□□□ -0.77
KLHL3-205ENST00000504496 POLA1P09884 1462 aaPredicted RBP10.25□□□□□ -0.77
KLHL3-205ENST00000504496 MRC2Q9UBG0 1479 aa10.24□□□□□ -0.77
KLHL3-205ENST00000504496 WDR62O43379 1518 aa10.22□□□□□ -0.77
KLHL3-205ENST00000504496 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
KLHL3-205ENST00000504496 THOC2Q8NI27 1593 aaKnown RBP10.21□□□□□ -0.77
KLHL3-205ENST00000504496 ABCA10Q8WWZ4 1543 aa10.21□□□□□ -0.77
KLHL3-205ENST00000504496 GTF3C3Q9Y5Q9 886 aa10.21□□□□□ -0.78
KLHL3-205ENST00000504496 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
KLHL3-205ENST00000504496 CUX2O14529 1486 aa10.19□□□□□ -0.78
KLHL3-205ENST00000504496 ZBTB22O15209 634 aa10.19□□□□□ -0.78
KLHL3-205ENST00000504496 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
KLHL3-205ENST00000504496 ERCC6Q03468 1493 aa10.18□□□□□ -0.78
KLHL3-205ENST00000504496 RAD54L2Q9Y4B4 1467 aa10.18□□□□□ -0.78
KLHL3-205ENST00000504496 ERICH3Q5RHP9 1530 aa10.18□□□□□ -0.78
KLHL3-205ENST00000504496 ABCA5Q8WWZ7 1642 aa10.17□□□□□ -0.78
KLHL3-205ENST00000504496 PRXQ9BXM0 1461 aa10.16□□□□□ -0.78
KLHL3-205ENST00000504496 CLIP1P30622 1438 aa10.16□□□□□ -0.78
KLHL3-205ENST00000504496 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
KLHL3-205ENST00000504496 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
KLHL3-205ENST00000504496 CUL7Q14999 1698 aa10.13□□□□□ -0.79
KLHL3-205ENST00000504496 APLP2Q06481 763 aa10.12□□□□□ -0.79
KLHL3-205ENST00000504496 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
KLHL3-205ENST00000504496 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
KLHL3-205ENST00000504496 PBRM1Q86U86 1689 aa10.11□□□□□ -0.79
KLHL3-205ENST00000504496 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
KLHL3-205ENST00000504496 IGF1RP08069 1367 aa10.11□□□□□ -0.79
KLHL3-205ENST00000504496 RANGAP1P46060 587 aaPredicted RBP10.1□□□□□ -0.79
KLHL3-205ENST00000504496 GAPVD1Q14C86 1478 aa10.09□□□□□ -0.79
KLHL3-205ENST00000504496 EIF4G3O43432 1585 aaKnown RBP10.06□□□□□ -0.8
KLHL3-205ENST00000504496 CARMIL1Q5VZK9 1371 aa10.05□□□□□ -0.8
KLHL3-205ENST00000504496 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
KLHL3-205ENST00000504496 MIER1Q8N108 512 aa10.05□□□□□ -0.8
KLHL3-205ENST00000504496 ADAMTS12P58397 1594 aa10.04□□□□□ -0.8
KLHL3-205ENST00000504496 CTTNBP2Q8WZ74 1663 aa10.03□□□□□ -0.8
KLHL3-205ENST00000504496 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
KLHL3-205ENST00000504496 ZNF608Q9ULD9 1512 aaPredicted RBP10.03□□□□□ -0.8
KLHL3-205ENST00000504496 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
KLHL3-205ENST00000504496 GRIN2BQ13224 1484 aa10.02□□□□□ -0.81
KLHL3-205ENST00000504496 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.81
KLHL3-205ENST00000504496 FHAD1B1AJZ9 1412 aa9.98□□□□□ -0.81
KLHL3-205ENST00000504496 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
KLHL3-205ENST00000504496 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
KLHL3-205ENST00000504496 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.82
KLHL3-205ENST00000504496 DHX57Q6P158 1386 aaKnown RBP9.94□□□□□ -0.82
KLHL3-205ENST00000504496 EFCAB5A4FU69 1503 aa9.94□□□□□ -0.82
KLHL3-205ENST00000504496 ARHGAP35Q9NRY4 1499 aa9.93□□□□□ -0.82
KLHL3-205ENST00000504496 CLSPNQ9HAW4 1339 aa9.93□□□□□ -0.82
KLHL3-205ENST00000504496 MYT1Q01538 1121 aa9.93□□□□□ -0.82
KLHL3-205ENST00000504496 DCAF8L1A6NGE4 600 aa9.91□□□□□ -0.82
KLHL3-205ENST00000504496 SYNJ2O15056 1496 aa9.91□□□□□ -0.82
KLHL3-205ENST00000504496 GRIN2AQ12879 1464 aa9.91□□□□□ -0.82
KLHL3-205ENST00000504496 SAMD9Q5K651 1589 aa9.91□□□□□ -0.82
KLHL3-205ENST00000504496 KANK4Q5T7N3 995 aaPredicted RBP9.91□□□□□ -0.82
KLHL3-205ENST00000504496 IQGAP2Q13576 1575 aa9.9□□□□□ -0.83
KLHL3-205ENST00000504496 RRBP1Q9P2E9 1410 aaKnown RBP9.88□□□□□ -0.83
KLHL3-205ENST00000504496 FOXD4L1Q9NU39 408 aa9.86□□□□□ -0.83
KLHL3-205ENST00000504496 CEP170Q5SW79 1584 aa9.86□□□□□ -0.83
KLHL3-205ENST00000504496 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
KLHL3-205ENST00000504496 CHD1O14646 1710 aa9.85□□□□□ -0.83
KLHL3-205ENST00000504496 ITGAEP38570 1179 aa9.85□□□□□ -0.83
KLHL3-205ENST00000504496 KIAA0586Q9BVV6 1533 aa9.85□□□□□ -0.83
KLHL3-205ENST00000504496 UGGT2Q9NYU1 1516 aa9.84□□□□□ -0.83
KLHL3-205ENST00000504496 NUP160Q12769 1436 aa9.84□□□□□ -0.83
KLHL3-205ENST00000504496 PCF11O94913 1555 aaKnown RBP9.83□□□□□ -0.84
KLHL3-205ENST00000504496 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
KLHL3-205ENST00000504496 CFAP43Q8NDM7 1665 aa9.82□□□□□ -0.84
KLHL3-205ENST00000504496 TIAM1Q13009 1591 aa9.81□□□□□ -0.84
KLHL3-205ENST00000504496 KIAA0556O60303 1618 aa9.81□□□□□ -0.84
KLHL3-205ENST00000504496 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
KLHL3-205ENST00000504496 FYCO1Q9BQS8 1478 aa9.8□□□□□ -0.84
KLHL3-205ENST00000504496 MAP3K1Q13233 1512 aa9.8□□□□□ -0.84
KLHL3-205ENST00000504496 FMN1Q68DA7 1419 aa9.8□□□□□ -0.84
KLHL3-205ENST00000504496 RAB3GAP2Q9H2M9 1393 aa9.79□□□□□ -0.84
KLHL3-205ENST00000504496 SUPT16HQ9Y5B9 1047 aaKnown RBP9.78□□□□□ -0.84
KLHL3-205ENST00000504496 DISP1Q96F81 1524 aa9.78□□□□□ -0.84
KLHL3-205ENST00000504496 CASKIN1Q8WXD9 1431 aa9.78□□□□□ -0.84
KLHL3-205ENST00000504496 MAPKBP1O60336 1514 aa9.77□□□□□ -0.85
KLHL3-205ENST00000504496 LRRIQ1Q96JM4 1722 aa9.76□□□□□ -0.85
KLHL3-205ENST00000504496 FBLN2P98095 1184 aa9.75□□□□□ -0.85
KLHL3-205ENST00000504496 SHROOM2Q13796 1616 aa9.75□□□□□ -0.85
KLHL3-205ENST00000504496 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
KLHL3-205ENST00000504496 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
KLHL3-205ENST00000504496 LRRC9Q6ZRR7 1453 aa9.74□□□□□ -0.85
KLHL3-205ENST00000504496 HECW1Q76N89 1606 aa9.74□□□□□ -0.85
KLHL3-205ENST00000504496 CLASP1Q7Z460 1538 aa9.73□□□□□ -0.85
KLHL3-205ENST00000504496 FAM50AQ14320 339 aaKnown RBP9.72□□□□□ -0.85
KLHL3-205ENST00000504496 ATP1B4Q9UN42 357 aaPredicted RBP9.71□□□□□ -0.85
KLHL3-205ENST00000504496 PHLDB1Q86UU1 1377 aa9.71□□□□□ -0.85
KLHL3-205ENST00000504496 CARMIL2Q6F5E8 1435 aa9.71□□□□□ -0.86
KLHL3-205ENST00000504496 CCDC18Q5T9S5 1454 aa9.7□□□□□ -0.86
KLHL3-205ENST00000504496 RAPGEF6Q8TEU7 1601 aa9.7□□□□□ -0.86
KLHL3-205ENST00000504496 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
KLHL3-205ENST00000504496 SIN3AQ96ST3 1273 aa9.68□□□□□ -0.86
KLHL3-205ENST00000504496 RTN4Q9NQC3 1192 aaKnown RBP9.68□□□□□ -0.86
KLHL3-205ENST00000504496 JPH4Q96JJ6 628 aa9.68□□□□□ -0.86
KLHL3-205ENST00000504496 DDX10Q13206 875 aaKnown RBP9.67□□□□□ -0.86
KLHL3-205ENST00000504496 EPRSP07814 1512 aaKnown RBP9.67□□□□□ -0.86
KLHL3-205ENST00000504496 EHBP1L1Q8N3D4 1523 aa9.67□□□□□ -0.86
KLHL3-205ENST00000504496 PRG4Q92954 1404 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms