RNA–Protein interactions for RNA: ENST00000504447.1

FBXO38-207, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 1,716 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-207ENST00000504447 CFTRP13569 1480 aa13.51□□□□□ -0.25
FBXO38-207ENST00000504447 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
FBXO38-207ENST00000504447 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
FBXO38-207ENST00000504447 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
FBXO38-207ENST00000504447 CUX1P39880 1505 aa13.48□□□□□ -0.25
FBXO38-207ENST00000504447 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
FBXO38-207ENST00000504447 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
FBXO38-207ENST00000504447 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
FBXO38-207ENST00000504447 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
FBXO38-207ENST00000504447 NESP48681 1621 aa13.38□□□□□ -0.27
FBXO38-207ENST00000504447 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
FBXO38-207ENST00000504447 IGF1RP08069 1367 aa13.36□□□□□ -0.27
FBXO38-207ENST00000504447 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
FBXO38-207ENST00000504447 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
FBXO38-207ENST00000504447 CUX2O14529 1486 aa13.34□□□□□ -0.27
FBXO38-207ENST00000504447 DHX57Q6P158 1386 aaKnown RBP13.34□□□□□ -0.27
FBXO38-207ENST00000504447 MAP3K1Q13233 1512 aa13.34□□□□□ -0.27
FBXO38-207ENST00000504447 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.27
FBXO38-207ENST00000504447 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.27
FBXO38-207ENST00000504447 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
FBXO38-207ENST00000504447 MIER1Q8N108 512 aa13.3□□□□□ -0.28
FBXO38-207ENST00000504447 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
FBXO38-207ENST00000504447 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
FBXO38-207ENST00000504447 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
FBXO38-207ENST00000504447 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
FBXO38-207ENST00000504447 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
FBXO38-207ENST00000504447 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
FBXO38-207ENST00000504447 FANCD2Q9BXW9 1451 aa13.24□□□□□ -0.29
FBXO38-207ENST00000504447 ABCB7O75027 752 aa13.24□□□□□ -0.29
FBXO38-207ENST00000504447 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
FBXO38-207ENST00000504447 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.29
FBXO38-207ENST00000504447 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
FBXO38-207ENST00000504447 LRRC9Q6ZRR7 1453 aa13.18□□□□□ -0.3
FBXO38-207ENST00000504447 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
FBXO38-207ENST00000504447 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
FBXO38-207ENST00000504447 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
FBXO38-207ENST00000504447 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
FBXO38-207ENST00000504447 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
FBXO38-207ENST00000504447 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
FBXO38-207ENST00000504447 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
FBXO38-207ENST00000504447 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
FBXO38-207ENST00000504447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.14□□□□□ -0.31
FBXO38-207ENST00000504447 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.31
FBXO38-207ENST00000504447 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
FBXO38-207ENST00000504447 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
FBXO38-207ENST00000504447 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
FBXO38-207ENST00000504447 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
FBXO38-207ENST00000504447 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
FBXO38-207ENST00000504447 THOC2Q8NI27 1593 aaKnown RBP13.09□□□□□ -0.31
FBXO38-207ENST00000504447 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
FBXO38-207ENST00000504447 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
FBXO38-207ENST00000504447 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
FBXO38-207ENST00000504447 CFAP43Q8NDM7 1665 aa13.09□□□□□ -0.31
FBXO38-207ENST00000504447 ITGAEP38570 1179 aa13.08□□□□□ -0.32
FBXO38-207ENST00000504447 CUL7Q14999 1698 aa13.08□□□□□ -0.32
FBXO38-207ENST00000504447 POLA1P09884 1462 aaPredicted RBP13.08□□□□□ -0.32
FBXO38-207ENST00000504447 WDR62O43379 1518 aa13.07□□□□□ -0.32
FBXO38-207ENST00000504447 MAPKBP1O60336 1514 aa13.07□□□□□ -0.32
FBXO38-207ENST00000504447 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
FBXO38-207ENST00000504447 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
FBXO38-207ENST00000504447 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
FBXO38-207ENST00000504447 PCF11O94913 1555 aaKnown RBP13.04□□□□□ -0.32
FBXO38-207ENST00000504447 KCNA4P22459 653 aa13.03□□□□□ -0.32
FBXO38-207ENST00000504447 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
FBXO38-207ENST00000504447 FHOD3Q2V2M9 1422 aa13.01□□□□□ -0.33
FBXO38-207ENST00000504447 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
FBXO38-207ENST00000504447 CTTNBP2Q8WZ74 1663 aa12.98□□□□□ -0.33
FBXO38-207ENST00000504447 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
FBXO38-207ENST00000504447 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
FBXO38-207ENST00000504447 MYT1Q01538 1121 aa12.96□□□□□ -0.33
FBXO38-207ENST00000504447 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.33
FBXO38-207ENST00000504447 SNAPC4Q5SXM2 1469 aa12.96□□□□□ -0.34
FBXO38-207ENST00000504447 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.34
FBXO38-207ENST00000504447 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
FBXO38-207ENST00000504447 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
FBXO38-207ENST00000504447 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
FBXO38-207ENST00000504447 MTUS2Q5JR59 1369 aa12.93□□□□□ -0.34
FBXO38-207ENST00000504447 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
FBXO38-207ENST00000504447 GAPVD1Q14C86 1478 aa12.93□□□□□ -0.34
FBXO38-207ENST00000504447 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
FBXO38-207ENST00000504447 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
FBXO38-207ENST00000504447 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
FBXO38-207ENST00000504447 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
FBXO38-207ENST00000504447 UACAQ9BZF9 1416 aa12.9□□□□□ -0.35
FBXO38-207ENST00000504447 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
FBXO38-207ENST00000504447 SUPT16HQ9Y5B9 1047 aaKnown RBP12.88□□□□□ -0.35
FBXO38-207ENST00000504447 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
FBXO38-207ENST00000504447 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
FBXO38-207ENST00000504447 NCOA2Q15596 1464 aa12.87□□□□□ -0.35
FBXO38-207ENST00000504447 CCDC18Q5T9S5 1454 aa12.86□□□□□ -0.35
FBXO38-207ENST00000504447 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
FBXO38-207ENST00000504447 EHBP1L1Q8N3D4 1523 aa12.85□□□□□ -0.35
FBXO38-207ENST00000504447 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
FBXO38-207ENST00000504447 NAIPQ13075 1403 aa12.85□□□□□ -0.35
FBXO38-207ENST00000504447 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
FBXO38-207ENST00000504447 ARHGEF11O15085 1522 aa12.84□□□□□ -0.35
FBXO38-207ENST00000504447 SUPT6HQ7KZ85 1726 aaKnown RBP12.84□□□□□ -0.35
FBXO38-207ENST00000504447 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
FBXO38-207ENST00000504447 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.35
FBXO38-207ENST00000504447 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms